Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0173600-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:3779634:3782002:1 gene:Os01g0173600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE I-1 description:Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein. (Os01t0173600-00)
Sequence

ATGGTGAACACGACGGCGGGCGTGAAGTGCGGCGGCGGCGGGGCGGCGCTGCCGCTGTCG
ACGCTGAACCACGTCTCCCTGGTGTGCCGGTCGCTGTCCACCTCGCTCACCTTCTACCGC
GACTTCCTCGGCTTCGTCTCCGTCCGCCGCCCGGGCTCCTTCGACTTCGACGGCGCATGG
CTGTTCAACTACGGCATCGGCATCCACCTGCTGCAGGCAGAGGACCCGGAGAGCATGCCA
CCCAATAAGGAGATCAACCCCAAGGATAACCACATCTCATTCACGTGCGAGAGCATGGAG
GCGGTGCAGCGGCGGCTGAAGGAGATGGGCGTCCGGTACGTGCAGCGGCGGGTGGAGGAA
GGCGGCGTGTACGTGGACCAGATCTTCTTCCACGACCCCGACGGCTTCATGATCGAGATC
TGCACCTGCGACAAGCTCCCCGTCGTCCCCCTCGACGCCGCCGCCGCCCACTCCATCTTC
GCCGGCCGCTCGCCGCCGCCGCCCGTCGCCTGCAAGATCAGGCCCGTCAAGCAGCCGTCG
GCGACGAAGCTGGGCAGCGTCGCCGCCGGCGGCTGTGTTGGGGAGGTCATCGTCGTCGAC
GCGATCAACGGCGCCGCCGCCGCCGGCGGCGGCGGCGCGATGAGCTGA

Peptide Sequence

PEP ID

Os01t0173600-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:3779634:3782002:1 gene:Os01g0173600 transcript:Os01t0173600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE I-1 description:Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein. (Os01t0173600-00)
Sequence

MVNTTAGVKCGGGGAALPLSTLNHVSLVCRSLSTSLTFYRDFLGFVSVRRPGSFDFDGAW
LFNYGIGIHLLQAEDPESMPPNKEINPKDNHISFTCESMEAVQRRLKEMGVRYVQRRVEE
GGVYVDQIFFHDPDGFMIEICTCDKLPVVPLDAAAAHSIFAGRSPPPPVACKIRPVKQPS
ATKLGSVAAGGCVGEVIVVDAINGAAAAGGGGAMS

Transcript Sequence

Transcript ID

Os01t0173600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3779634:3782002:1 gene:Os01g0173600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE I-1 description:Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein. (Os01t0173600-00)
Sequence

GGAACATATACAGACGTCCCTCGTCTCTTCACCTCCGGCGGCCGCCTTACACCCGGCCAC
CAGCTTGTTCGTCGCCGGCGAGCTAGCTTCCTCCTCTCCGGGCTCCGGCGTCTCCGCCGG
CCGGCTGGCCTGTTCGTCGTAGTATATATATCGTCGTCGTCTCCGTCGACGACAAAACTG
TGTAGTGCCACTGATCGCGACCCGGCCGGCATTATTGAGGCTGAGGCAACGATCGACCTG
ACACAAGAAGAAAGAAGATGGTGAACACGACGGCGGGCGTGAAGTGCGGCGGCGGCGGGG
CGGCGCTGCCGCTGTCGACGCTGAACCACGTCTCCCTGGTGTGCCGGTCGCTGTCCACCT
CGCTCACCTTCTACCGCGACTTCCTCGGCTTCGTCTCCGTCCGCCGCCCGGGCTCCTTCG
ACTTCGACGGCGCATGGCTGTTCAACTACGGCATCGGCATCCACCTGCTGCAGGCAGAGG
ACCCGGAGAGCATGCCACCCAATAAGGAGATCAACCCCAAGGATAACCACATCTCATTCA
CGTGCGAGAGCATGGAGGCGGTGCAGCGGCGGCTGAAGGAGATGGGCGTCCGGTACGTGC
AGCGGCGGGTGGAGGAAGGCGGCGTGTACGTGGACCAGATCTTCTTCCACGACCCCGACG
GCTTCATGATCGAGATCTGCACCTGCGACAAGCTCCCCGTCGTCCCCCTCGACGCCGCCG
CCGCCCACTCCATCTTCGCCGGCCGCTCGCCGCCGCCGCCCGTCGCCTGCAAGATCAGGC
CCGTCAAGCAGCCGTCGGCGACGAAGCTGGGCAGCGTCGCCGCCGGCGGCTGTGTTGGGG
AGGTCATCGTCGTCGACGCGATCAACGGCGCCGCCGCCGCCGGCGGCGGCGGCGCGATGA
GCTGAGGAGACTTGTGGCATTGCTGATCCAACGAGGAATCATTGATTTGATGAATTGTTG
TTCAACTTTAATTTTGGTCGTGATGATGATTAAGGTGTATGTAATTCGATCCGGTGATT