Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0173000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3737904:3742067:-1 gene:Os01g0173000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thiol-disulphide oxidoreductase DCC domain containing protein. (Os01t0173000-01)
Sequence

AGGCTGCATCACTCGATCGAGGAGAAGAGCCGAGCTGAGGCGAAGGCGACGAGGATGGCA
ACGACCAGCGCCTGCTGCTACCGCCCGCTCTCCGCGCCGCCGCTCCACCGCCGGCGCGGC
CCGCCGCCGCAGCAGCAGCAGCTGCGAACCGCAGTGGGAGGGCCACGGCCACGGCCGAGC
TTGCAGGTTGCGGCGGCGGCGGCGACCGGCGGTGGGCAGTCCGTGAAGGCGGCCACGGAC
GCCGAGTTCTTCCAGACCTCCGACACAAGGCCCATCATGCTCTTCGACGGTGTGTGCAAC
CTCTGCAACGGCGGCGTCCGGTTCGTCCAGGAGCATGACCCCAACAGAAGCATCAGGTAT
ATCCCGTTGCAGAGCGAATCCGGGAGGAAGCTCCTTCAGAGGTCAGGGAGAGCCCCTGAT
GACATCTCGAGTGTGGTTCTTGTCGAGAAGGACAGGTCCTACATCAAGTCTGAAGCAGTG
CTGAGGATAATGGGGTATCTCAACCTGCCTTTTCCTCAGCTAGCCACCTTCCTCAACTTT
GTCCCTCTGTAA

Peptide Sequence

PEP ID

Os01t0173000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3737904:3742067:-1 gene:Os01g0173000 transcript:Os01t0173000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thiol-disulphide oxidoreductase DCC domain containing protein. (Os01t0173000-01)
Sequence

RLHHSIEEKSRAEAKATRMATTSACCYRPLSAPPLHRRRGPPPQQQQLRTAVGGPRPRPS
LQVAAAAATGGGQSVKAATDAEFFQTSDTRPIMLFDGVCNLCNGGVRFVQEHDPNRSIRY
IPLQSESGRKLLQRSGRAPDDISSVVLVEKDRSYIKSEAVLRIMGYLNLPFPQLATFLNF
VPL

Transcript Sequence

Transcript ID

Os01t0173000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3737904:3742067:-1 gene:Os01g0173000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative thiol-disulphide oxidoreductase DCC domain containing protein. (Os01t0173000-01)
Sequence

CAGGCTGCATCACTCGATCGAGGAGAAGAGCCGAGCTGAGGCGAAGGCGACGAGGATGGC
AACGACCAGCGCCTGCTGCTACCGCCCGCTCTCCGCGCCGCCGCTCCACCGCCGGCGCGG
CCCGCCGCCGCAGCAGCAGCAGCTGCGAACCGCAGTGGGAGGGCCACGGCCACGGCCGAG
CTTGCAGGTTGCGGCGGCGGCGGCGACCGGCGGTGGGCAGTCCGTGAAGGCGGCCACGGA
CGCCGAGTTCTTCCAGACCTCCGACACAAGGCCCATCATGCTCTTCGACGGTGTGTGCAA
CCTCTGCAACGGCGGCGTCCGGTTCGTCCAGGAGCATGACCCCAACAGAAGCATCAGGTA
TATCCCGTTGCAGAGCGAATCCGGGAGGAAGCTCCTTCAGAGGTCAGGGAGAGCCCCTGA
TGACATCTCGAGTGTGGTTCTTGTCGAGAAGGACAGGTCCTACATCAAGTCTGAAGCAGT
GCTGAGGATAATGGGGTATCTCAACCTGCCTTTTCCTCAGCTAGCCACCTTCCTCAACTT
TGTCCCTCTGTAAGTATACTATCTCTCTCGCTCACCTCAACTTGCACGCAAAATGGCTTG
TCAAGTGCTATTTATTAACCCATTTTACAATATCATTATTCTAGCTGATGCTGTTAGTTT
TTTATTTGAGTAGCTAGATGCTTTGTTCATGTAACCTGATGCAATTAAAGCCTACTCATT
GTGTCACATTGTTAGGTTCCTGAGGGACTTCGCGTACGACAATGTTGCAGACAACCGGTA
CGCAGTGTTTGGTCGCTCGGAGTCAGAGTCATGTGAGATATTGTGAAATGCCAATCGCAA
CCCATCGATACTTTGTTAATACATCACATAGTAGGAGTTTGTAATCAAACTTAGTTTGGT
TTACAAGGCAATCATCCAAGGAAGAACTGTACATAGCAGTATGTCTAAAGATGGTAACAG
CGTGGAGCATTAGCTGCCAAGGTTTATGAAAAAACAACTTTTGGTACCACTGATCCCTCA
ACAGTTCCGTTTGCATTTAAAATAGTGGCGTTTGCTAGGGCGGTATGATTTTCCCATGAG
AGGTTAATATTACTGAGGTAGATGCCTTGGCAATGCACACTTTGACTGCACAATATCTTG
ATGGCCTCTTGCTCGGAGGATGTCCCACGGATATTGATAAATCTTGCGTCACTTATGGCC
ACACCACCATCCTACAAGAATATCAAGATTTAGGCATATTTCATCCTGTTTTCTAGAGTA
TGAATTTACTGAGTGGATAATGAACATGACATGTGTTTAGTAGATTTCACCTTTAATGGA
CAGTTTCCTTGGGGACAATAGAACTGGTCGATGATAATGGGACTTTCGACTGCAGTCATG
TTGATGTTTTCAAAAATGAACCCCGTTGCTTGACCCATTCCACCCTTCATCCAATAACTT
CAAATATTAGGGGTAATTACTATTTCCTGTTTACTATTTAAAGAGAGCATATGTACATGG
TGATATGTATGCAACCATCAGTAAAAATTCATGCATGGGACATATATGAGCAAGATGCAT
AGATGTTGCTTAGTTCTTACCTGCCATGATTTGATCCTCACACCATTCTTTGTTCCAATA
AAGTTACAGTTGGATACTGTAATTCGTTCCACCAGTGCCGTTTCGAATCGTCCAAGGCTT
CCCACGCTAGATATGGTCAGAAGTTAGTCCCATGTGTTGCTAAAAAGAAGTTGACGAGTA
CTTAGCTAGCACAAGCATGCATATTCATGGTTGTGCATTTGTAAATTGTACCTGATGCCG
TGGCCAGGCCCACATGTGATGTCAGTGATGTTAACATCAGTGGTGTATGATAGCATCGAC
ACGCAGTCGTCTCCTGCATTTGTCCAGTGTCAGCACTCACACACATTTGAGTCTATCATC
AATTCATTTCAGTGATTTGTGTTGATGATATGCAAATGATACACAGTGATCTCTATGAAA
GGATTTTTTTTACCACTTTGGATAGAGCAATTTGAGATGTACACATGATCAGAAATTGCC
ATGGTTATGCCGTCTGTATTGGGGCTGTCGCCTGGTGCAACTATGGTGACATTGTGCACA
TGTACCTGGCTGCACCTGTACACAGTCATGTGTTTGTCTGCGCTGTTCGTCAGATGTATA
TTCGTCACCGATAGATTGTTACACGCAGCAAAGGCCAGGATCTGATACACATAGATACAT
GCATGAGTAATCATACAGAACAGTGTCTACATAACTAGTTTCAGACTGACTGAAGGAAGT
GTTGTGTGTACTTACAACAGGCCGATAGACGCATTTCTGTCAAAACAAGAATACATCAGA
TTGCTTACAGGGAATACATGAAGAAGCTACTGCTATTTGCTGAAGTCTACCTTTTCAGTA
TAACAAGTCCACCAGATGGCACCTTTGCCATCAATCTGACCATTTCCATCTAATGTCAAG
TTATTGACACTGTAGAAGGTTATAAGGTTGTCTGCTTCTGATGCCCAAATGTAGTTTGGT
GCCACAATGTTACCATCCATCTGGAGAATGTCAATTCAGAATTCATGCTACATTAGCTTC
TTGTACCGGCTTAAAAAGAAGCTTCTTATGTGGTATGATATCTCAGACCAGTTCAGAGTC
ACCAAATATGTAGGTTACCTGTATCTTTATTGGTGACTTGCAGGAACCGTTGAATTTAAT
TTGTTTCAACAAGAATGTCCTTCCTCCAGGGATGATCAAGATCGGCCAGCCTTCATTGTT
GCAGGTCTCTTCCCATGCCGCCAGGAACGCCTTCTCAGCAGAGAAGATGCATGGAAAGTG
GCATTGAAATCCAAGACGTTGTATAACGGCCGTTTCTGTGCTTCAGACGAACGGGTCAAC
ACGAGCAACAACACAAAGGTATATTTTGCTTCAACCCAAATCCTCTGCAATTCCAAAGTT
TTGTCAGGTAAGAAAACATAGTTCATAAGAATGTCAGTAACAAATCTTCAGATAACCTTT
GAAAAGAAAATAGCAAATCTTCAGATAACTTAAAACTGACAAACAGTAGTAGATAGAATG
AGATATACCATGATTTACGGTGCAAATCTGATTAACAACACCCTGAGTCCTCACTCTACT
GAAGACAAGCTTTGGATGAACTCAACACTGGGTTAGGCCTAATATGATAAGACGAAGTGT
TCTTCTAGTTCATATATAAACACACGACCAGCACCTGTGGAACAACTGGATTACCGGTGT
CATTAATTGCTATGATTCTGCCAACATATCAAATCTGCATCTTAGTAAAGCAGTGAAAAT
CCCTTTAATGTAGTTGCTATAAGTATGATGACAGTATTTTTCTCAAGTCCAGAAAGCATT
GTACGCTCCAATATCATCATACTTATCTTGCTAGCATTTATACGCTCCAACCTCAGCATT
ACAGTAATCTTGCTGGCATTTATACGCTCCTGTGATTTGAGCATTTACAAAAACGAAATC
ATTTCACCATTTTTGTATGCAACGTACCTGCCATTCCTAGACATTTCCAAAAGATTCACG
GTGCTATTTGAATGAGCTAAAAGCTCACTTCTTTTTTGGGGAATAAGAGGGATTTTCTCT
AGTCCTGTACCTGGGATATCCCCTTCCATTATAAGGCTTCCTCCTTCCGGT