Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0172400-04
CDS Infomation	cds chromosome:IRGSP-1.0:1:3725174:3727006:-1 gene:Os01g0172400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 1 description:Similar to Phospholipase D alpha 1. (Os01t0172400-01);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-02);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-03);Similar to Phospholipase D alpha 1. (Os01t0172400-04);Similar to Phospholipase D alpha 1. (Os01t0172400-05)
Sequence	GAAAATTACTTCCATGGCTCTGACGTGAACTGTGTTCTATGCCCTCGCAACCCTGATGAC TCAGGCAGCATTGTTCAGGATCTGTCGATCTCAACTATGTTTACACACCATCAGAAGATA GTAGTTGTTGACCATGAGTTGCCAAACCAGGGCTCCCAACAAAGGAGGATAGTCAGTTTC GTTGGTGGCCTTGATCTCTGTGATGGAAGGTATGACACTCAGTACCATTCTTTGTTTAGG ACACTCGACAGTACCCATCATGATGACTTCCACCAGCCAAACTTTGCCACTGCATCAATC AAAAAGGGTGGACCTAGAGAGCCATGGCATGATATTCACTCACGGCTGGAAGGGCCAATC GCATGGGATGTTCTTTACAATTTCGAGCAGAGATGGAGAAAGCAGGGTGGTAAGGATCTC CTTCTGCAGCTCAGGGATCTGTCTGACACTATTATTCCACCTTCTCCTGTTATGTTTCCA GAGGACAGAGAAACATGGAATGTTCAGCTATTTAGATCCATTGATGGTGGTGCTGCTTTT GGGTTCCCTGATACCCCTGAGGAGGCTGCAAAAGCTGGGCTTGTAAGCGGAAAGGATCAA ATCATTGACAGGAGCATCCAGGATGCATACATACATGCCATCCGGAGGGCAAAGAACTTC ATCTATATAGAGAACCAATACTTCCTTGGAAGTTCCTATGCCTGGAAACCCGAGGGCATC AAGCCTGAAGACATTGGTGCCCTGCATTTGATTCCTAAGGAGCTTGCACTGAAAGTTGTC AGTAAGATTGAAGCCGGGGAACGGTTCACTGTTTATGTTGTGGTGCCAATGTGGCCTGAG GGTGTTCCAGAGAGTGGATCTGTTCAGGCAATCCTGGACTGGCAAAGGAGAACAATGGAG ATGATGTACACTGACATTACAGAGGCTCTCCAAGCCAAGGGAATTGAAGCGAACCCCAAG GACTACCTCACTTTCTTCTGCTTGGGTAACCGTGAGGTGAAGCAGGCTGGGGAATATCAG CCTGAAGAACAACCAGAAGCTGACACTGATTACAGCCGAGCTCAGGAAGCTAGGAGGTTC ATGATCTATGTCCACACCAAAATGATGATAGTTGACGATGAGTACATCATCATCGGTTCT GCAAACATCAACCAGAGGTCGATGGACGGCGCTAGGGACTCTGAGATCGCCATGGGCGGG TACCAGCCATACCATCTGGCGACCAGGCAACCAGCCCGTGGCCAGATCCATGGCTTCCGG ATGGCGCTGTGGTACGAGCACCTGGGAATGCTGGATGATGTGTTCCAGCGCCCCGAGAGC CTGGAGTGTGTGCAGAAGGTGAACAGGATCGCGG

Peptide Sequence

PEP ID	Os01t0172400-04
PEP Infomation	pep chromosome:IRGSP-1.0:1:3725174:3727006:-1 gene:Os01g0172400 transcript:Os01t0172400-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 1 description:Similar to Phospholipase D alpha 1. (Os01t0172400-01);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-02);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-03);Similar to Phospholipase D alpha 1. (Os01t0172400-04);Similar to Phospholipase D alpha 1. (Os01t0172400-05)
Sequence	ENYFHGSDVNCVLCPRNPDDSGSIVQDLSISTMFTHHQKIVVVDHELPNQGSQQRRIVSF VGGLDLCDGRYDTQYHSLFRTLDSTHHDDFHQPNFATASIKKGGPREPWHDIHSRLEGPI AWDVLYNFEQRWRKQGGKDLLLQLRDLSDTIIPPSPVMFPEDRETWNVQLFRSIDGGAAF GFPDTPEEAAKAGLVSGKDQIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYAWKPEGI KPEDIGALHLIPKELALKVVSKIEAGERFTVYVVVPMWPEGVPESGSVQAILDWQRRTME MMYTDITEALQAKGIEANPKDYLTFFCLGNREVKQAGEYQPEEQPEADTDYSRAQEARRF MIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFR MALWYEHLGMLDDVFQRPESLECVQKVNRIA

Transcript Sequence

Transcript ID	Os01t0172400-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3725174:3727006:-1 gene:Os01g0172400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D ALPHA 1 description:Similar to Phospholipase D alpha 1. (Os01t0172400-01);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-02);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-03);Similar to Phospholipase D alpha 1. (Os01t0172400-04);Similar to Phospholipase D alpha 1. (Os01t0172400-05)
Sequence	TGAAAATTACTTCCATGGCTCTGACGTGAACTGTGTTCTATGCCCTCGCAACCCTGATGA CTCAGGCAGCATTGTTCAGGATCTGTCGATCTCAACTATGTTTACACACCATCAGAAGAT AGTAGTTGTTGACCATGAGTTGCCAAACCAGGGCTCCCAACAAAGGAGGATAGTCAGTTT CGTTGGTGGCCTTGATCTCTGTGATGGAAGGTATGACACTCAGTACCATTCTTTGTTTAG GACACTCGACAGTACCCATCATGATGACTTCCACCAGCCAAACTTTGCCACTGCATCAAT CAAAAAGGGTGGACCTAGAGAGCCATGGCATGATATTCACTCACGGCTGGAAGGGCCAAT CGCATGGGATGTTCTTTACAATTTCGAGCAGAGATGGAGAAAGCAGGGTGGTAAGGATCT CCTTCTGCAGCTCAGGGATCTGTCTGACACTATTATTCCACCTTCTCCTGTTATGTTTCC AGAGGACAGAGAAACATGGAATGTTCAGCTATTTAGATCCATTGATGGTGGTGCTGCTTT TGGGTTCCCTGATACCCCTGAGGAGGCTGCAAAAGCTGGGCTTGTAAGCGGAAAGGATCA AATCATTGACAGGAGCATCCAGGATGCATACATACATGCCATCCGGAGGGCAAAGAACTT CATCTATATAGAGAACCAATACTTCCTTGGAAGTTCCTATGCCTGGAAACCCGAGGGCAT CAAGCCTGAAGACATTGGTGCCCTGCATTTGATTCCTAAGGAGCTTGCACTGAAAGTTGT CAGTAAGATTGAAGCCGGGGAACGGTTCACTGTTTATGTTGTGGTGCCAATGTGGCCTGA GGGTGTTCCAGAGAGTGGATCTGTTCAGGCAATCCTGGACTGGCAAAGGAGAACAATGGA GATGATGTACACTGACATTACAGAGGCTCTCCAAGCCAAGGGAATTGAAGCGAACCCCAA GGACTACCTCACTTTCTTCTGCTTGGGTAACCGTGAGGTGAAGCAGGCTGGGGAATATCA GCCTGAAGAACAACCAGAAGCTGACACTGATTACAGCCGAGCTCAGGAAGCTAGGAGGTT CATGATCTATGTCCACACCAAAATGATGATAGTTGACGATGAGTACATCATCATCGGTTC TGCAAACATCAACCAGAGGTCGATGGACGGCGCTAGGGACTCTGAGATCGCCATGGGCGG GTACCAGCCATACCATCTGGCGACCAGGCAACCAGCCCGTGGCCAGATCCATGGCTTCCG GATGGCGCTGTGGTACGAGCACCTGGGAATGCTGGATGATGTGTTCCAGCGCCCCGAGAG CCTGGAGTGTGTGCAGAAGGTGAACAGGATCGCGG