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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0172300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3720138:3723145:-1 gene:Os01g0172300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0172300-01)
Sequence

ATGGCGGCCCTCGGTGGCGGTGGCGGTGGCGGTGGCGGAGGCGAGGGCGGATCGGCGTCG
AGGGTCGGGGACTGGGGTGTTGACTTGGGGGAGGGGTGGGACTGGAGGAGCATCCCGAAG
CTCCTCTCCTCCGCCTGCCTCTTCATCTGCTCCGGAGGCTGTTTTGGATGCTGTGATAAG
GCTGTGAGACATGTAGGACAGCTTTCAAAGAGTTTAATTACTCCGGACCAAAATTACACC
ATTGGGGACGAACTCTGGAGCACAACCACCATCGAGGTCGAACAGTCATGGGCTCTTGAT
CAGCAAGGAGTGGGGAGCAGTCAGGGCCCTACTGAATTTGTCAATCATGGTCTTGTTCTT
TGGAAGGAGATTAGGAAGGACTGGACTGCGAAAACAAGGCAAATACCTGAGACGAAACAG
ATTCGCGAACCAATATTGAGTTGGAATGCAGCCTATGAGAGTTTGCTTGGATCCAATAAG
CCGTTTCATCAGCCCATCCCTCTACATGAGATGGTTGATTTTCTTGTGGACATCTGGGAA
CAAGAGGGGCTGTATGACTAG

Peptide Sequence

PEP ID

Os01t0172300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3720138:3723145:-1 gene:Os01g0172300 transcript:Os01t0172300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0172300-01)
Sequence

MAALGGGGGGGGGGEGGSASRVGDWGVDLGEGWDWRSIPKLLSSACLFICSGGCFGCCDK
AVRHVGQLSKSLITPDQNYTIGDELWSTTTIEVEQSWALDQQGVGSSQGPTEFVNHGLVL
WKEIRKDWTAKTRQIPETKQIREPILSWNAAYESLLGSNKPFHQPIPLHEMVDFLVDIWE
QEGLYD

Transcript Sequence

Transcript ID

Os01t0172300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3720138:3723145:-1 gene:Os01g0172300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0172300-01)
Sequence

AGCGCAGCGCACTCTGTCAAATCCGTGCAATCTCCGCCATCTCCCTCTCACCATCTTCCT
CCTCTCTCCCCTTATCCCAAATTTCCCCATCAATCGCCACCCGCGCCCAATTCCCCCACT
CGATTCGATTCGACTCGGTCGGGATCCCCCCATGGCGAGCGGCGCCTCGTAGCGACGAAA
TCGAGCCAGCGAGTGGATGCGGCGCGCGCCATGGCGGCCCTCGGTGGCGGTGGCGGTGGC
GGTGGCGGAGGCGAGGGCGGATCGGCGTCGAGGGTCGGGGACTGGGGTGTTGACTTGGGG
GAGGGGTGGGACTGGAGGAGCATCCCGAAGCTCCTCTCCTCCGCCTGCCTCTTCATCTGC
TCCGGAGGCTGTTTTGGATGCTGTGATAAGGCTGTGAGACATGTAGGACAGCTTTCAAAG
AGTTTAATTACTCCGGACCAAAATTACACCATTGGGGACGAACTCTGGAGCACAACCACC
ATCGAGGTCGAACAGTCATGGGCTCTTGATCAGCAAGGAGTGGGGAGCAGTCAGGGCCCT
ACTGAATTTGTCAATCATGGTCTTGTTCTTTGGAAGGAGATTAGGAAGGACTGGACTGCG
AAAACAAGGCAAATACCTGAGACGAAACAGATTCGCGAACCAATATTGAGTTGGAATGCA
GCCTATGAGAGTTTGCTTGGATCCAATAAGCCGTTTCATCAGCCCATCCCTCTACATGAG
ATGGTTGATTTTCTTGTGGACATCTGGGAACAAGAGGGGCTGTATGACTAGCACAAATGT
TTTTAATAATAGTAACATAGTTGTAGGCTTGATGATGATGAGGTAACTTTGAGGTAACTT
GGAGGGTTCGGCCTGCCATACTTGTTTTTGAATGGCGGCCAGTTGTACTTGCTTAATACA
AGGTTGTGGTTGTTGTAATGTGAGAAAGGTCGAGATTTAGACGCTTTGTCGAATTGTCAA
AGAAAGCAAAGCCAGAGAGAAATTTGTAACACTAACTCATGGACATTAATGTGATGTGTG
TCGATAGAGAAGT