Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0172200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3713740:3718631:-1 gene:Os01g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 14 description:DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein. (Os01t0172200-01)
Sequence	ATGGCGTCGGCGGCGGCGGCGGCGGCGACGGCGAGGGGGCCGCGGTACGCGCCGCCAGAT CCGACGCTGCCCAAGCCGTGGAGGGGGCTCATCGACGGCAACACCGGGTACCTCTACTTC TGGAACCCGGAGACCAAGGCCGTGCAGTACGACCGCCCCACGGCGCCGCCGCCCTCCTCC CCCCCGGCGCAGCAGCCTCCGGAGAGGCCTAGGAACAGCGATCCTGCTGAGTCGCAGGCG CAGGCTGGAGCGAGCCGAACGCAGAATGCTGCTCCTGCTGATGATAGGGCAAGGAATGAT CATTTGAATGATCATTTCGAGCGGCGCACGGAAGCGGCGGGAAGTCATGCGCAGAACGTG CCTTTCACTGAGCAAAATACTAGGAGCAACCCTTCTTCGCAGCCGTGCTCTGCAGCTGGA GTATACCCTGCACAGAATGTATTTTCAGAGGCTGCCAGTGGAGACCGCACCTCACCAGAA GCGTATCGTGCTAAGCACGAGATCACTATTGTCGGAAATGAGGCTCCAGCTCCATTCATG ACATTTCAGTCCACAGGTTTCCCTCCAGAGATTCTAAGGGAGGTAAGTGCACACAATTTA CATGACTATTTAATGCATTTTCTTGTATCCTTCTCGAAAGAAATTAGGAGGTCATTGTGC GTTCATACTACGTATGTGATAACTACGCTGGATGTTCATCTCAGCAGGCTCTTCAAGTCA ACAATCTATGTCAAGGTACAGCAAGCGGGATTCTCTGCACCAACTCCTATCCAAGCTCAA TCATGGCCAATTGCTCTTAGGAATCGTGATATTGTAGCTGTGGCGAAGACAGGTTCCGGA AAAACACTGGGTTATCTCATTCCAGGGTTTATCCTTCTTAAGCGCCTTCAACATAATTCA AGGGATGGTCCAACGGTATTAGTGCTTTCTCCAACAAGGGAATTGGCAACACAAATCCAA GATGAAGCGAAAAAGTTTGGGAGATCGTCAAGAATATCGTCTGTTTGTTTATATGGAGGT GCTCCTAAAGGTCCTCAGCTAAGAGATCTAGAGCGTGGTGCAGACATTGTGGTTGCAACT CCTGGAAGATTGAATGACATTTTAGAAATGCGAAGAGTGAGCCTACATCAAGTATCTTAT CTTGTTCTTGATGAGGCTGACCGCATGCTTGATATGGGTTTTGAGCCACAAATAAGAAAA ATTGTGAAACAAGTACAACCCAAACGACAGACTCTTATGTTCACTGCCACTTGGCCAAAA GAGGTGAGGAAAATAGCCTCAGATTTGCTGTCCAATCCAGTCCAAGTTAACATTGGGAAC ACTGATCAACTGGTTGCCAATAAGTCAATCACTCAGTATGTGGATGTTATCACACCTCCG GAGAAATCGAGGCGGCTTGATCAAATCCTAAGGTCACAGGAACCTGGATCGAAAATCATA ATATTTTGCTCCACAAAGAGGATGTGTGATCAGCTGGCTCGAAACCTAGCACGGCAGTAT GGTGCTTCTGCTATTCATGGTGATAAATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAA TTTCGAAGTGGCAGATGCCCTATTCTTGTTGCTACTGATGTGGCTGCCCGAGGCTTGGAC ATAAAGGATATCAGAGTTGTGGTCAACTACGATTTCCCAACAGGTGTTGAGGATTACGTC CATAGAATTGGGAGAACAGGACGGGCTGGAGCGACTGGAGTTGCCTATACATTCTTCTGT GATCAGGATTCAAAGTATGCTTCAGATCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCT GTTTCGCAACAGTTGAGAGATATGGTCTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGC TGGGCATCTTCAGATGACTCTTATGGTGGTCGAGGATATGATTCAGGCTATACTTCAAGG TCGACTGACAACTATAACAGTGGTTATGGCAGTCAGTCTGGGAATGGTTCTAGCTTTCAT AGTAGCTTCCATAACAGCAACAGTGGCAATCAGTTTGGCGATACTTCTGGCTTCCAAACC AGCTTTCATAACAGCAGCAGCAACAATCAAACCAGTGACAATCCAAGCTTTCATGCCAGC AGCAACAACGATCAACCTGGTGATGGTCTCAGCTTTCATGCCAGGTTCTATAGCTCTTCT CGAGGCAGCGATCAGAGCAGAACAAACAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCT CCAAGCAATCGCAACCATGAAGATCCTGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAA

Peptide Sequence

PEP ID	Os01t0172200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3713740:3718631:-1 gene:Os01g0172200 transcript:Os01t0172200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 14 description:DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein. (Os01t0172200-01)
Sequence	MASAAAAAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAPPPSS PPAQQPPERPRNSDPAESQAQAGASRTQNAAPADDRARNDHLNDHFERRTEAAGSHAQNV PFTEQNTRSNPSSQPCSAAGVYPAQNVFSEAASGDRTSPEAYRAKHEITIVGNEAPAPFM TFQSTGFPPEILREVSAHNLHDYLMHFLVSFSKEIRRSLCVHTTYVITTLDVHLSRLFKS TIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNS RDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVAT PGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPK EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPGSKII IFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLD IKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVKILEGANQS VSQQLRDMVSRGGYGGRSRRWASSDDSYGGRGYDSGYTSRSTDNYNSGYGSQSGNGSSFH SSFHNSNSGNQFGDTSGFQTSFHNSSSNNQTSDNPSFHASSNNDQPGDGLSFHARFYSSS RGSDQSRTNNAGFRDRSRSPPSNRNHEDPGSKAVGVSNW

Transcript Sequence

Transcript ID	Os01t0172200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3713740:3718631:-1 gene:Os01g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 14 description:DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein. (Os01t0172200-01)
Sequence	AATCACATTCTTCTCTTCTCATCGACCCCTCCGCCTCCTCTCCTCTCCTTTCCATTTTTT CCCCATCGCGCCCTACTTAACCACGCGACGCCAAAAAAAGAAAAAGAGGAGAGAGCAAAA CAAAGCGAAGGCTCCATTCATTCACTCCATCTCCTCGCGTCCCCTCCCCGCTCCCCCCGC CGCAATCCGCATTCGCTAGGGGTTGGGTTGGGAGATGGCGTCGGCGGCGGCGGCGGCGGC GACGGCGAGGGGGCCGCGGTACGCGCCGCCAGATCCGACGCTGCCCAAGCCGTGGAGGGG GCTCATCGACGGCAACACCGGGTACCTCTACTTCTGGAACCCGGAGACCAAGGCCGTGCA GTACGACCGCCCCACGGCGCCGCCGCCCTCCTCCCCCCCGGCGCAGCAGCCTCCGGAGAG GCCTAGGAACAGCGATCCTGCTGAGTCGCAGGCGCAGGCTGGAGCGAGCCGAACGCAGAA TGCTGCTCCTGCTGATGATAGGGCAAGGAATGATCATTTGAATGATCATTTCGAGCGGCG CACGGAAGCGGCGGGAAGTCATGCGCAGAACGTGCCTTTCACTGAGCAAAATACTAGGAG CAACCCTTCTTCGCAGCCGTGCTCTGCAGCTGGAGTATACCCTGCACAGAATGTATTTTC AGAGGCTGCCAGTGGAGACCGCACCTCACCAGAAGCGTATCGTGCTAAGCACGAGATCAC TATTGTCGGAAATGAGGCTCCAGCTCCATTCATGACATTTCAGTCCACAGGTTTCCCTCC AGAGATTCTAAGGGAGGTAAGTGCACACAATTTACATGACTATTTAATGCATTTTCTTGT ATCCTTCTCGAAAGAAATTAGGAGGTCATTGTGCGTTCATACTACGTATGTGATAACTAC GCTGGATGTTCATCTCAGCAGGCTCTTCAAGTCAACAATCTATGTCAAGGTACAGCAAGC GGGATTCTCTGCACCAACTCCTATCCAAGCTCAATCATGGCCAATTGCTCTTAGGAATCG TGATATTGTAGCTGTGGCGAAGACAGGTTCCGGAAAAACACTGGGTTATCTCATTCCAGG GTTTATCCTTCTTAAGCGCCTTCAACATAATTCAAGGGATGGTCCAACGGTATTAGTGCT TTCTCCAACAAGGGAATTGGCAACACAAATCCAAGATGAAGCGAAAAAGTTTGGGAGATC GTCAAGAATATCGTCTGTTTGTTTATATGGAGGTGCTCCTAAAGGTCCTCAGCTAAGAGA TCTAGAGCGTGGTGCAGACATTGTGGTTGCAACTCCTGGAAGATTGAATGACATTTTAGA AATGCGAAGAGTGAGCCTACATCAAGTATCTTATCTTGTTCTTGATGAGGCTGACCGCAT GCTTGATATGGGTTTTGAGCCACAAATAAGAAAAATTGTGAAACAAGTACAACCCAAACG ACAGACTCTTATGTTCACTGCCACTTGGCCAAAAGAGGTGAGGAAAATAGCCTCAGATTT GCTGTCCAATCCAGTCCAAGTTAACATTGGGAACACTGATCAACTGGTTGCCAATAAGTC AATCACTCAGTATGTGGATGTTATCACACCTCCGGAGAAATCGAGGCGGCTTGATCAAAT CCTAAGGTCACAGGAACCTGGATCGAAAATCATAATATTTTGCTCCACAAAGAGGATGTG TGATCAGCTGGCTCGAAACCTAGCACGGCAGTATGGTGCTTCTGCTATTCATGGTGATAA ATCACAAGCCGAGAGGGATTCTGTGTTGAGTGAATTTCGAAGTGGCAGATGCCCTATTCT TGTTGCTACTGATGTGGCTGCCCGAGGCTTGGACATAAAGGATATCAGAGTTGTGGTCAA CTACGATTTCCCAACAGGTGTTGAGGATTACGTCCATAGAATTGGGAGAACAGGACGGGC TGGAGCGACTGGAGTTGCCTATACATTCTTCTGTGATCAGGATTCAAAGTATGCTTCAGA TCTCGTGAAGATTTTGGAGGGTGCAAACCAGTCTGTTTCGCAACAGTTGAGAGATATGGT CTCCCGTGGAGGGTATGGTGGAAGGTCACGGCGCTGGGCATCTTCAGATGACTCTTATGG TGGTCGAGGATATGATTCAGGCTATACTTCAAGGTCGACTGACAACTATAACAGTGGTTA TGGCAGTCAGTCTGGGAATGGTTCTAGCTTTCATAGTAGCTTCCATAACAGCAACAGTGG CAATCAGTTTGGCGATACTTCTGGCTTCCAAACCAGCTTTCATAACAGCAGCAGCAACAA TCAAACCAGTGACAATCCAAGCTTTCATGCCAGCAGCAACAACGATCAACCTGGTGATGG TCTCAGCTTTCATGCCAGGTTCTATAGCTCTTCTCGAGGCAGCGATCAGAGCAGAACAAA CAATGCTGGCTTTCGTGATAGAAGTAGGAGTCCTCCAAGCAATCGCAACCATGAAGATCC TGGGTCCAAGGCTGTTGGTGTCTCCAACTGGTAAGTGCTAACTGCAAGATGCAAACAGCA TCATGATGGTGACGAACAGAGTAGATGAAGCTGTTCTCTTACCAAACTATACTATCGTGC GTGCTCCCCCTGAAGCAAAAGTGTGTCCCAGAACTTAACTAACATAGGATAAGACTGTGG ATCTTCTGCTGTGCAGATGTAGCGCACTTGATAATGTATGTCTGGTGTTAGTCGTTTGTC AGACCTGGGGGCTCGGACTTCCTTGCTATCTATACCTGCTACCGCTATGATCATGTGGAA ACAAACCATCTGAGGCATGCATTTTGGACGAAAACATGCACTCTTAATCCTTATATGACT TGTAGATTATTTACCCCAGCGTCGTTTACATTGAACTATTTCC