Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0170700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3652273:3656479:1 gene:Os01g0170700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-activated cytolysin family protein. (Os01t0170700-01)
Sequence	ATGGACGGGCGCGCCGGTTGCTGCGTCCGCTTCATCGGCTGCTGCCTCGCCGCCGACGGT GACGCCGCCCTGAGCCAGAGCGCGGCCGCGCTGCACAGGATGGCGTCGGCGTTCTTGGAC GCTCACGGCGAGCCCTTGGTACTCCTCGACCACCGGGTGCTCTGCTCCCATGGCGTCGCC ACCGTGGGGCACAGCCAGGCCTTCGCCGCGGCGATGAGGCAGCGCAGAGAGGAGATTCCC CCTGCCCCATTCAGGATTCTGCTGCAGGAAGAATATGTCGGGTGGGCTGAAGTGGCGGCA TGCGCCAATGGGAACAAGATTGTGGACAAGAAGTCCTGGAGAGCTTCGGTCAGGAACATG CTCGATGCTGTGTACAGGATGATATGTCAGGTCCTTGCCTCTGCTGTGAGATCTGTTTGG GCTATTGGCACCTATATGCTTCCTCTATCAGCTGCAGAGTTTTTCAGAAGGAGACTACCC GCATCAGCTGTGCCAGAAAAAATTAGCTGGCGGGGTGTCATTAGCACTTTCAGATTTCAA ATCTTCCCTGATACCTGCGCCATAGTAGCATGCTCAGTCTGTATCGAGGCACAACACAGG CTCGAGTTTGAGCGCCTACACGGGCAAGGCACATTCATCCTCGAATTGCCTGATTCCACC AGGAAGCTGAGAAGATTCTGCCTGGAGAGAAAAGCTTGGTTTAAGGGTAAAGGGGCTCAT ATCGATAGCCTCCTGTCTCTGATCCAGGAGACTGGTGGAGTGCCCGCAATAAGTACAACG AACACAAGAAGCAGCCTCCTTCTGCCCCTTCACAGCTATGACTACTTCAGCCTCCGGGGG TGCTGGACAAACCTGACACCCCAGCAGGCTGCACAGCTGATCTTCACCGGTGGTCCCTGC ATTGGCAGTCTCTGGGTTGATGGATCCTACACCAGCAAGCACCACTACAGCGATGACAAC GATGACGATGAGGAGGACATGCTAGTGTACCGTGGCTGTGATCCCAAGAAGAAGATACAC CGGGATAAGGAGACAGGCTTACATGCCGTCGTGTGTTACGCGTACCTCTTCATTGGGAAG GAGCTGCACATCCGTGTCCAGGACAATATGCCTATCTGCAGTCCCCACAACTGGATCCTT TTCCAGGCGTTTGACATGTTTTACACCCTACGAGTCATGCCCTTAGATGCTTCAAGACTG TATGATCCCTTGTAG

Peptide Sequence

PEP ID	Os01t0170700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3652273:3656479:1 gene:Os01g0170700 transcript:Os01t0170700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-activated cytolysin family protein. (Os01t0170700-01)
Sequence	MDGRAGCCVRFIGCCLAADGDAALSQSAAALHRMASAFLDAHGEPLVLLDHRVLCSHGVA TVGHSQAFAAAMRQRREEIPPAPFRILLQEEYVGWAEVAACANGNKIVDKKSWRASVRNM LDAVYRMICQVLASAVRSVWAIGTYMLPLSAAEFFRRRLPASAVPEKISWRGVISTFRFQ IFPDTCAIVACSVCIEAQHRLEFERLHGQGTFILELPDSTRKLRRFCLERKAWFKGKGAH IDSLLSLIQETGGVPAISTTNTRSSLLLPLHSYDYFSLRGCWTNLTPQQAAQLIFTGGPC IGSLWVDGSYTSKHHYSDDNDDDEEDMLVYRGCDPKKKIHRDKETGLHAVVCYAYLFIGK ELHIRVQDNMPICSPHNWILFQAFDMFYTLRVMPLDASRLYDPL

Transcript Sequence

Transcript ID	Os01t0170700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3652273:3656479:1 gene:Os01g0170700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-activated cytolysin family protein. (Os01t0170700-01)
Sequence	GTGTTCTCAGCTTCCTCCACTAGTCTACCGCCGCTGCCTCCTCCTCGTCTCCTCTCCTCT CACCATCTCACCATCTCACTACCCACACTGTTCCATGGGGGCCTCAAATTGGAGGCGGCG CCGGCGGCGAGGAAGGTATCGAAGTCGAAGCCACCGTCGTCGACAGCCATGTCTAGCGGG CACCACATGCTGTGGCCGGCTCGCCGCCCACCGCCGCCGCCGCCACCGCCACTATCGCCG GCATCAAGGGAGGCGAACCCTTGTTCTGGTGGGCCGGCCCACCAAGCCAGCCCATCAGCG GAGGCAACTGGTGGGCCAGCCTGACATCCTGGGCCCACCGTTCATGTGTCCCGCCTTAGT TGTTTCTTCTCCTCGCTCGAGGCTGCAAGAAAATCAAGAACCCGATCGCCACGTCGAGAT CAACCTCTCTCCAGGCCGGCAATGGACGGGCGCGCCGGTTGCTGCGTCCGCTTCATCGGC TGCTGCCTCGCCGCCGACGGTGACGCCGCCCTGAGCCAGAGCGCGGCCGCGCTGCACAGG ATGGCGTCGGCGTTCTTGGACGCTCACGGCGAGCCCTTGGTACTCCTCGACCACCGGGTG CTCTGCTCCCATGGCGTCGCCACCGTGGGGCACAGCCAGGCCTTCGCCGCGGCGATGAGG CAGCGCAGAGAGGAGATTCCCCCTGCCCCATTCAGGATTCTGCTGCAGGAAGAATATGTC GGGTGGGCTGAAGTGGCGGCATGCGCCAATGGGAACAAGATTGTGGACAAGAAGTCCTGG AGAGCTTCGGTCAGGAACATGCTCGATGCTGTGTACAGGATGATATGTCAGGTCCTTGCC TCTGCTGTGAGATCTGTTTGGGCTATTGGCACCTATATGCTTCCTCTATCAGCTGCAGAG TTTTTCAGAAGGAGACTACCCGCATCAGCTGTGCCAGAAAAAATTAGCTGGCGGGGTGTC ATTAGCACTTTCAGATTTCAAATCTTCCCTGATACCTGCGCCATAGTAGCATGCTCAGTC TGTATCGAGGCACAACACAGGCTCGAGTTTGAGCGCCTACACGGGCAAGGCACATTCATC CTCGAATTGCCTGATTCCACCAGGAAGCTGAGAAGATTCTGCCTGGAGAGAAAAGCTTGG TTTAAGGGTAAAGGGGCTCATATCGATAGCCTCCTGTCTCTGATCCAGGAGACTGGTGGA GTGCCCGCAATAAGTACAACGAACACAAGAAGCAGCCTCCTTCTGCCCCTTCACAGCTAT GACTACTTCAGCCTCCGGGGGTGCTGGACAAACCTGACACCCCAGCAGGCTGCACAGCTG ATCTTCACCGGTGGTCCCTGCATTGGCAGTCTCTGGGTTGATGGATCCTACACCAGCAAG CACCACTACAGCGATGACAACGATGACGATGAGGAGGACATGCTAGTGTACCGTGGCTGT GATCCCAAGAAGAAGATACACCGGGATAAGGAGACAGGCTTACATGCCGTCGTGTGTTAC GCGTACCTCTTCATTGGGAAGGAGCTGCACATCCGTGTCCAGGACAATATGCCTATCTGC AGTCCCCACAACTGGATCCTTTTCCAGGCGTTTGACATGTTTTACACCCTACGAGTCATG CCCTTAGATGCTTCAAGACTGTATGATCCCTTGTAGAAGATGACAGTGCCGCCGAAGATT TCACAGAAGATAGGCAAAGACCGAGCATGGCTCCATGCCAACCTTCGTCGGCTACATGAA GCGATGATGATCCAGAAAGGGAAAGAGAAGGTCTGCTGAAGTTAGGAGCTTGCTGGTGAG CCGGTTTTATCTCTCTTGAAGGCTGTGTTCGTTCATTCTGCGCCGCTGCTCTCTTCGTCA GTATTAGCTGACTGATTGATTAGTTGTAATGCTGAATGGCGAGATGGTGTCCCCAGCATT TTGTAGAAAGACCTGATCCATCCTGTTTACGCCTTCAAGTAAACCTGGACGCTAAGCCTT TTGTCCAGAATGCATGACTGTGTGCAGACACACAATGGATCGATTTTCTCCTTTTTGTGT GTGTGTGTCGTTTCAGTCAAATTTTGGGCGTCAGGGCTGTTTGAGATTTGTTATGTGGTT TTGAGGCTTGCCTGTTTTGATTGCTACTTTGAGTTCCACGAAGTGATGAAGTAGTACATA TTTATTTTATTGTGTTCTTTTTTTGCCTCTTCTGTCATTTCAACTTTATCTATGGTGATC ATCTGACCAAGTACTTCTCTAGTTGTCTGGTCAGTTAATTTTTTTATTCCTGAAATGTGC TTACTTAAGATTTATGATATTTTGTGAATTGTGATGGGGT