Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0170300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3621211:3625338:1 gene:Os01g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0170300-01)
Sequence	ATGCCTCCTGGTCTGAGCAGGAGGAGGCGGCCGGACGCGGCGGCGTTGCTGTGCTGCGTG GTCGCCGTCGTGGCGGCGTGCATGGTCGGCGGCGCCCTCGCCGCCGACGCCCAGGGCGCG GCGCTGCTCGCGTGGAAGCGCACGCTGCGCGGCGGCGACACGGCCTTGCCTGACTGGAAC CCCGCCGACGCGTCGCCGTGCCGGTGGACGGGCGTGAGGTGCAATGCCAATGGGCGAGTC ACCGAGCTGAGCCTCCAGCAAGTTGACCTGCTCGGCGGCGTGCCGGACAACCTGTCCGCC GCCATGGGCACCACGCTGGAGCGGCTGGTGCTCGCCGGCGCCAACCTGTCCGGCCCGATC CCGGCGCAGCTCGGCGACCTGCCGGCGCTGACCCACCTCGACCTCAGCAACAATGCGCTC ACCGGCTCGATCCCGGCGAGCCTGTGCCGGCCGGGGAGCAAGCTGGAGAGCCTGTACGTG AACTCGAACCACCTGGAGGGCGCCATCCCGGACGCCATTGGCAACCTCACGGCGCTCCGC GAGCTCATCATCTTCGACAACCAGCTCGACGGCGCCATCCCGGCGTCCATCGGGCAGATG GCCAGCCTCGAGGTGCTCCGCGGCGGCGGCAACAAGAACCTCCAGGGCGCGCTCCCGCCG GAGATCGGCAACTGCTCCAAGCTCACCATGCTCGGCCTCGCCGAGACCAGCATCTCCGGC CCGCTCCCGGCGACCCTCGGCCAGCTCAAGAACCTCAACACGCTCGCCATCTACACGGCG CTGCTCTCCGGCCCAATCCCGCCGGAGCTCGGCCGGTGCACCAGCCTGGAGAACATCTAC CTGTACGAGAACGCGCTGTCCGGCTCCATCCCGGCGCAGCTCGGCGGCCTCGCCAACCTC AAGAACCTCCTCCTGTGGCAGAACAACCTCGTCGGCGTCATCCCGCCGGAGCTCGGCGCG TGCACGGGCCTCGCCGTCGTCGACCTGTCCATGAACGGCCTCACCGGCCACATCCCGGCG TCGCTCGGCAACCTCTCGTCGCTGCAGGAGCTCCAGCTCAGCGTCAACAAGGTGTCCGGC CCCATCCCGGCCGAGCTGTCGCGGTGCACCAACCTCACCGACCTCGAGCTCGACAACAAC CAGATCTCCGGCGCCATACCGGCCGAGCTCGGCAAGCTCACGGCGCTCCGCATGCTCTAC CTCTGGGCCAACCAGCTCACCGGCACCATCCCGCCGGAGATCGGCGGCTGCGCCGGCCTC GAGTCGCTCGACCTGTCGCAGAACGCGCTCACCGGGCCCATCCCCCGCTCCCTCTTCCGG CTGCCGCGGCTGTCCAAGCTGCTGCTCATCGACAACACCCTCTCCGGCGAGATACCGCCG GAGATCGGCAACTGCACGTCGCTGGTCCGGTTCAGGGCGAGCGGCAACCACCTCGCCGGC GACATACCTCCCGAGGTCGGTAAGCTTGGCAGCCTCAGCTTCCTCGACCTCAGCACCAAC AGGCTCTCCGGCGCCATCCCGCCGGAGATCGCCGGCTGCCGGAACCTCACGTTCGTCGAC CTCCACGGCAATGCCATCGCCGGCGTGCTGCCGCCGGGACTTTTCCAGGGCACGCCGTCG CTGCAGTATCTTGACCTCTCGTACAACGCCATCGGCGGCGCGATCCCGGCGAACATCGGG ATGCTCGGGTCACTCACCAAGCTTGTTCTCGGCGGGAACCGGCTCTCCGGCCAGATACCG CCGGAGATTGGGTCGTGCTCGCGGCTCCAGCTGCTTGACCTCAGCGGCAACTCGCTCACC GGCGCGATTCCGGCGAGCATCGGCAAGATTCCCGGGCTGGAGATCGCTCTCAACCTCAGC TGCAACGGCTTGTCCGGCGCGATACCCAAGGGGTTCGCCGGGCTGGCGCGGCTCGGCGTG CTCGACGTGTCGCACAACCAGCTCACCGGCGACCTCCAGCCGCTGTCCGCGCTCCAGAAC CTCGTCGCGCTCAACATCTCGTACAACAACTTCACCGGCCGCGCGCCGGAGACGGCGTTC TTCGCGAGGCTGCCGGCGAGCGACGTGGAGGGCAACCCGGGGCTGTGCCTCTCGCGGTGC CCCGGCGACGCCAGCGACCGGGAGCGCGCGGCGCGGCGCGCCGCCCGCGTCGCGACCGCC GTGCTCCTCTCCGCGCTCGTCGCCCTCCTCGCCGCCGCGGCGTTCGTCCTCTTCGGCCGG CGCCGGCAGCCGCTGTTCGGCCGCGGGTCGACGAGCCCCGCCGACGGCGACGGCAAGGAC GCCGACATGCTGCCGCCGTGGGACGTCACGCTCTACCAGAAGCTGGAGATCAGCGTGGGC GACGTGGCGCGCAGCCTCACGCCGGCGAACGTCATCGGTCAGGGCTGGTCCGGGGCGGTG TACCGCGCGAGCATCCCGTCCACCGGCGTCGCCATCGCCGTCAAGAAGTTCCGGTCCTCT GACGAGGCGTCCGTCGACGCGTTCGCCTGCGAGGTCGGCGTGCTGCCGCGCGTGCGCCAC CGCAACATCGTGCGCCTCCTCGGCTGGGCGGCCAACCGCCGGACACGCCTCCTCTTCTAC GACTACCTCCCAAACGGCACCCTCGGCGGCCTCCTCCACGGCGGCGGCGCCGCCATTGGC GCCGCCGTGGTGGAGTGGGAGGTGCGGCTCTCGATCGCCGTCGGCGTGGCCGAGGGCCTC GCCTACCTCCACCACGACTCTGTGCCGGCGATCCTCCACCGCGACGTCAAGTCCGACAAC ATCCTCCTCGGTGAGCGCTACGAGGCGTGCCTCGCTGACTTCGGCCTCGCCAGAGTCGCC GACGACGGCGCCAACTCGTCGCCGCCGCCGTTCGCCGGATCGTACGGATACATCGCTCCT GAGTACGGGTGTATGACCAAGATCACGACCAAGAGCGACGTGTACAGCTTCGGAGTCGTG CTACTAGAGATAATCACCGGCCGCCGACCGATAGAAGCAGCTTTCGGCGAGGGCCAAACT GTGGTGCAATGGGTACGCGAGCACCTCCACCGGAAACGTGATCCCGCGGAGGTGATCGAC TCGCGGCTACAGGGCCGATCGGATACCCAAGTCCAAGAGATGTTACAAGCTCTCGGAATC GCCCTACTATGTGCTAGCACCCGCCCCGAGGACCGGCCGACCATGAAGGATGTGGCAGCA TTGTTACGTGGCCTTCGACACGATGACAGCGCCGAGGCCCAAAAGGCCGGGTCTGGGTCG GCCATAAAGTGGGCCGATCCAAGACAGCCCGGCTCACCAACTAAGCCGATGGCCCAAGCC CAGGCCCATTCCCACACCAGCTCACTGGCCTACTCAACAACCGGGAGTGTGTAG

Peptide Sequence

PEP ID	Os01t0170300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3621211:3625338:1 gene:Os01g0170300 transcript:Os01t0170300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0170300-01)
Sequence	MPPGLSRRRRPDAAALLCCVVAVVAACMVGGALAADAQGAALLAWKRTLRGGDTALPDWN PADASPCRWTGVRCNANGRVTELSLQQVDLLGGVPDNLSAAMGTTLERLVLAGANLSGPI PAQLGDLPALTHLDLSNNALTGSIPASLCRPGSKLESLYVNSNHLEGAIPDAIGNLTALR ELIIFDNQLDGAIPASIGQMASLEVLRGGGNKNLQGALPPEIGNCSKLTMLGLAETSISG PLPATLGQLKNLNTLAIYTALLSGPIPPELGRCTSLENIYLYENALSGSIPAQLGGLANL KNLLLWQNNLVGVIPPELGACTGLAVVDLSMNGLTGHIPASLGNLSSLQELQLSVNKVSG PIPAELSRCTNLTDLELDNNQISGAIPAELGKLTALRMLYLWANQLTGTIPPEIGGCAGL ESLDLSQNALTGPIPRSLFRLPRLSKLLLIDNTLSGEIPPEIGNCTSLVRFRASGNHLAG DIPPEVGKLGSLSFLDLSTNRLSGAIPPEIAGCRNLTFVDLHGNAIAGVLPPGLFQGTPS LQYLDLSYNAIGGAIPANIGMLGSLTKLVLGGNRLSGQIPPEIGSCSRLQLLDLSGNSLT GAIPASIGKIPGLEIALNLSCNGLSGAIPKGFAGLARLGVLDVSHNQLTGDLQPLSALQN LVALNISYNNFTGRAPETAFFARLPASDVEGNPGLCLSRCPGDASDRERAARRAARVATA VLLSALVALLAAAAFVLFGRRRQPLFGRGSTSPADGDGKDADMLPPWDVTLYQKLEISVG DVARSLTPANVIGQGWSGAVYRASIPSTGVAIAVKKFRSSDEASVDAFACEVGVLPRVRH RNIVRLLGWAANRRTRLLFYDYLPNGTLGGLLHGGGAAIGAAVVEWEVRLSIAVGVAEGL AYLHHDSVPAILHRDVKSDNILLGERYEACLADFGLARVADDGANSSPPPFAGSYGYIAP EYGCMTKITTKSDVYSFGVVLLEIITGRRPIEAAFGEGQTVVQWVREHLHRKRDPAEVID SRLQGRSDTQVQEMLQALGIALLCASTRPEDRPTMKDVAALLRGLRHDDSAEAQKAGSGS AIKWADPRQPGSPTKPMAQAQAHSHTSSLAYSTTGSV

Transcript Sequence

Transcript ID	Os01t0170300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3621211:3625338:1 gene:Os01g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0170300-01)
Sequence	GTCTCTCCCCTATCTCTCTCTACTAAAACCTCTCACCTCACCACCAATCCACCTACTAGT CTTGCAGAGTTGCAAGCAAACTACTATCTTGTCTCTCACTTAGCCTTCCAACACAAGCAA GAACCGAGATTATCTGCATGTGACACGCCAACATTTCAAGCTGATTCTACAATTCTACAG CATCCATCAGCTCAGCTCAGCTGAGCTCAGCTTTCAGTTTTGTTGCAGCAGTGTACTTTC AGACAGTACAGTGTCAAAACTGTCAAGTGTGTGTGGTTTCAGTGACTTGATTGGTTCGTA GAGTAGAGAGAGATGCCTCCTGGTCTGAGCAGGAGGAGGCGGCCGGACGCGGCGGCGTTG CTGTGCTGCGTGGTCGCCGTCGTGGCGGCGTGCATGGTCGGCGGCGCCCTCGCCGCCGAC GCCCAGGGCGCGGCGCTGCTCGCGTGGAAGCGCACGCTGCGCGGCGGCGACACGGCCTTG CCTGACTGGAACCCCGCCGACGCGTCGCCGTGCCGGTGGACGGGCGTGAGGTGCAATGCC AATGGGCGAGTCACCGAGCTGAGCCTCCAGCAAGTTGACCTGCTCGGCGGCGTGCCGGAC AACCTGTCCGCCGCCATGGGCACCACGCTGGAGCGGCTGGTGCTCGCCGGCGCCAACCTG TCCGGCCCGATCCCGGCGCAGCTCGGCGACCTGCCGGCGCTGACCCACCTCGACCTCAGC AACAATGCGCTCACCGGCTCGATCCCGGCGAGCCTGTGCCGGCCGGGGAGCAAGCTGGAG AGCCTGTACGTGAACTCGAACCACCTGGAGGGCGCCATCCCGGACGCCATTGGCAACCTC ACGGCGCTCCGCGAGCTCATCATCTTCGACAACCAGCTCGACGGCGCCATCCCGGCGTCC ATCGGGCAGATGGCCAGCCTCGAGGTGCTCCGCGGCGGCGGCAACAAGAACCTCCAGGGC GCGCTCCCGCCGGAGATCGGCAACTGCTCCAAGCTCACCATGCTCGGCCTCGCCGAGACC AGCATCTCCGGCCCGCTCCCGGCGACCCTCGGCCAGCTCAAGAACCTCAACACGCTCGCC ATCTACACGGCGCTGCTCTCCGGCCCAATCCCGCCGGAGCTCGGCCGGTGCACCAGCCTG GAGAACATCTACCTGTACGAGAACGCGCTGTCCGGCTCCATCCCGGCGCAGCTCGGCGGC CTCGCCAACCTCAAGAACCTCCTCCTGTGGCAGAACAACCTCGTCGGCGTCATCCCGCCG GAGCTCGGCGCGTGCACGGGCCTCGCCGTCGTCGACCTGTCCATGAACGGCCTCACCGGC CACATCCCGGCGTCGCTCGGCAACCTCTCGTCGCTGCAGGAGCTCCAGCTCAGCGTCAAC AAGGTGTCCGGCCCCATCCCGGCCGAGCTGTCGCGGTGCACCAACCTCACCGACCTCGAG CTCGACAACAACCAGATCTCCGGCGCCATACCGGCCGAGCTCGGCAAGCTCACGGCGCTC CGCATGCTCTACCTCTGGGCCAACCAGCTCACCGGCACCATCCCGCCGGAGATCGGCGGC TGCGCCGGCCTCGAGTCGCTCGACCTGTCGCAGAACGCGCTCACCGGGCCCATCCCCCGC TCCCTCTTCCGGCTGCCGCGGCTGTCCAAGCTGCTGCTCATCGACAACACCCTCTCCGGC GAGATACCGCCGGAGATCGGCAACTGCACGTCGCTGGTCCGGTTCAGGGCGAGCGGCAAC CACCTCGCCGGCGACATACCTCCCGAGGTCGGTAAGCTTGGCAGCCTCAGCTTCCTCGAC CTCAGCACCAACAGGCTCTCCGGCGCCATCCCGCCGGAGATCGCCGGCTGCCGGAACCTC ACGTTCGTCGACCTCCACGGCAATGCCATCGCCGGCGTGCTGCCGCCGGGACTTTTCCAG GGCACGCCGTCGCTGCAGTATCTTGACCTCTCGTACAACGCCATCGGCGGCGCGATCCCG GCGAACATCGGGATGCTCGGGTCACTCACCAAGCTTGTTCTCGGCGGGAACCGGCTCTCC GGCCAGATACCGCCGGAGATTGGGTCGTGCTCGCGGCTCCAGCTGCTTGACCTCAGCGGC AACTCGCTCACCGGCGCGATTCCGGCGAGCATCGGCAAGATTCCCGGGCTGGAGATCGCT CTCAACCTCAGCTGCAACGGCTTGTCCGGCGCGATACCCAAGGGGTTCGCCGGGCTGGCG CGGCTCGGCGTGCTCGACGTGTCGCACAACCAGCTCACCGGCGACCTCCAGCCGCTGTCC GCGCTCCAGAACCTCGTCGCGCTCAACATCTCGTACAACAACTTCACCGGCCGCGCGCCG GAGACGGCGTTCTTCGCGAGGCTGCCGGCGAGCGACGTGGAGGGCAACCCGGGGCTGTGC CTCTCGCGGTGCCCCGGCGACGCCAGCGACCGGGAGCGCGCGGCGCGGCGCGCCGCCCGC GTCGCGACCGCCGTGCTCCTCTCCGCGCTCGTCGCCCTCCTCGCCGCCGCGGCGTTCGTC CTCTTCGGCCGGCGCCGGCAGCCGCTGTTCGGCCGCGGGTCGACGAGCCCCGCCGACGGC GACGGCAAGGACGCCGACATGCTGCCGCCGTGGGACGTCACGCTCTACCAGAAGCTGGAG ATCAGCGTGGGCGACGTGGCGCGCAGCCTCACGCCGGCGAACGTCATCGGTCAGGGCTGG TCCGGGGCGGTGTACCGCGCGAGCATCCCGTCCACCGGCGTCGCCATCGCCGTCAAGAAG TTCCGGTCCTCTGACGAGGCGTCCGTCGACGCGTTCGCCTGCGAGGTCGGCGTGCTGCCG CGCGTGCGCCACCGCAACATCGTGCGCCTCCTCGGCTGGGCGGCCAACCGCCGGACACGC CTCCTCTTCTACGACTACCTCCCAAACGGCACCCTCGGCGGCCTCCTCCACGGCGGCGGC GCCGCCATTGGCGCCGCCGTGGTGGAGTGGGAGGTGCGGCTCTCGATCGCCGTCGGCGTG GCCGAGGGCCTCGCCTACCTCCACCACGACTCTGTGCCGGCGATCCTCCACCGCGACGTC AAGTCCGACAACATCCTCCTCGGTGAGCGCTACGAGGCGTGCCTCGCTGACTTCGGCCTC GCCAGAGTCGCCGACGACGGCGCCAACTCGTCGCCGCCGCCGTTCGCCGGATCGTACGGA TACATCGCTCCTGAGTACGGGTGTATGACCAAGATCACGACCAAGAGCGACGTGTACAGC TTCGGAGTCGTGCTACTAGAGATAATCACCGGCCGCCGACCGATAGAAGCAGCTTTCGGC GAGGGCCAAACTGTGGTGCAATGGGTACGCGAGCACCTCCACCGGAAACGTGATCCCGCG GAGGTGATCGACTCGCGGCTACAGGGCCGATCGGATACCCAAGTCCAAGAGATGTTACAA GCTCTCGGAATCGCCCTACTATGTGCTAGCACCCGCCCCGAGGACCGGCCGACCATGAAG GATGTGGCAGCATTGTTACGTGGCCTTCGACACGATGACAGCGCCGAGGCCCAAAAGGCC GGGTCTGGGTCGGCCATAAAGTGGGCCGATCCAAGACAGCCCGGCTCACCAACTAAGCCG ATGGCCCAAGCCCAGGCCCATTCCCACACCAGCTCACTGGCCTACTCAACAACCGGGAGT GTGTAGTGTAAGTCTAATCCAGAAGGGATCAGCCAAACAAAGCACTGTGATGTCTGTGGC AATGTGATGGTGACTGTGTCGTCGTTGAGCTCACCTCGGCCGGGCGGCGCTCGCCGCCGG CGACAAGCCGGCGTGGACAAGCTGGGGTCGGTGGAGTGGATCGGAGGAGGCAAAGGTGGG GAAGAAGAATATGAGGAAGACGCCACCTTGCATGAAACAAATTAAGCAGCAATAATTCCT CCTCGTGTACTGTACCATACATAGCAGTAGCTGGTGCAATGCATCTGGTATTCTGTTGTA TTTATGTATATTAACCCAGGGTAATTAATATCTTGGTAATCTATGATC