Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0169800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3577473:3581859:-1 gene:Os01g0169800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FISH BONE, TRYPTOPHAN AMINOTRANSFERASE 2 description:Tryptophan aminotransferase, Indole-3-acetic acid (IAA) biosynthesis (Os01t0169800-01)
Sequence	ATGGCGGCATTGCGCGTGGGCACGAGGGCGGTGGAAGGGAGGTTCCAAGCGAGCAACGGC GGCGGCGGCGGTGGCGGCGGCATGGCGCCGTCGTCGCGCCTCGTCGCGGCGCACCGGGAA GCGAAGCCGAGGAGCAGCCACTCGGCGGCGCCGTGGAAGCTGCCGCGGCGGCGAGCCGGC GCCATGCCGCTGTGGCGCGTCGCGGTGTTCGCCTCCGTCGCATTGAACGTCGCCACCCTC GCACTCCTCCTCCACCACTACGCCACCTCTCCTCCTCCCCACCACCACCACCACGACGCC GGACTCGCCACTCGCAGCAGCGACGCCGCCGTCCACCGGCGAGCCAGGACGGCGTCGTCG ATGGCGCCGTCGACCGGCAAGCCGGCGGTGACGACGGATTCCGTTATCAACCTTGACCAC GGCGACCCGACCATGTTCGAGGAGTTCTGGAGGGAGACCGGCGACGCGGCGGAGGTCGTC ATCCCGGGGTGGCAGACGATGAGCTACTTCTCCGACGTGACCAACGTCTGCTGGTTCCTC GAGCCGGAGCTCGACCGCCAGGTGCGCCGCCTCCACCGAGTCGTCGGCAACGCCGCCGTC GACGGCTACCACGTCCTCGTCGGCACCGGCTCCACCCAGCTCTTCATGGCCGCGCTCTAC GCCCTCGCCCCCGACGCCGCCGCCGCTGCCGCCGGCGAGCCCATCAGCGTCGTCTCCACT GCGCCCTACTACTCGTCATACCCCGCCGTGACGGACTTCCTCCGGTCGGGGCTCTTCCGG TGGGCCGGCGACGCCGACGCCTTCAAAGGCGACTCCTACATTGAGCTGGTCTGCTCCCCG AACAATCCTGACGGCGCCATCCGTGAAGCTGTTCTTGATCCAAAGACCGGCAATGGCAGG ACGGTCCATGACCTGGCCTACTACTGGCCTCAGTACACCCCCATCACCAAGCGTGCTTCC CATGACATCATGCTCTTCACCGTCTCCAAGAGCACCGGCCATGCCGGGACCAGGATCGGG TGGGCGTTGGTGAAGGACCGGGCGATCGCGAGGAAGATGACGAAGTTTGTGGAGCTGAAC ACGATCGGGGTGTCCAAGGACTCGCAGATGCGGGCGGCCAAGGTGCTCGCCGCCGTCTCC GACGGCTACGAGCGGCGGCCGGAGCAGACGAAAGAGACGATGACCACTCCTCTTCGCCTG TTCGACTTTGGTCGACGCAAGATGGTGGAGCGGTGGAGCATGCTCCGCGCTGCTGCCGCC GCCTCCGGCATCTTCAGCCTCCCGGAGGAGACCTCCGGCTTCTGCAACTTCACCAAGGAG ACCGCCGCGACCAACCCTGCGTTCGCGTGGCTGCGGTGCGATAGGGAGGATGTGGAGGAT TGTGCGGGGTTTCTCCGTGGGCACAAGATCCTGACGAGGAGCGGGGCGCAGTTCGGGGCG GATGCGAGGTACGTGCGGGTGAGCATGCTCGACAGGGACGACGCGTTCGACATCTTCATC AACCGCCTCTCGTCGCTCAAGTGA

Peptide Sequence

PEP ID	Os01t0169800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3577473:3581859:-1 gene:Os01g0169800 transcript:Os01t0169800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FISH BONE, TRYPTOPHAN AMINOTRANSFERASE 2 description:Tryptophan aminotransferase, Indole-3-acetic acid (IAA) biosynthesis (Os01t0169800-01)
Sequence	MAALRVGTRAVEGRFQASNGGGGGGGGMAPSSRLVAAHREAKPRSSHSAAPWKLPRRRAG AMPLWRVAVFASVALNVATLALLLHHYATSPPPHHHHHDAGLATRSSDAAVHRRARTASS MAPSTGKPAVTTDSVINLDHGDPTMFEEFWRETGDAAEVVIPGWQTMSYFSDVTNVCWFL EPELDRQVRRLHRVVGNAAVDGYHVLVGTGSTQLFMAALYALAPDAAAAAAGEPISVVST APYYSSYPAVTDFLRSGLFRWAGDADAFKGDSYIELVCSPNNPDGAIREAVLDPKTGNGR TVHDLAYYWPQYTPITKRASHDIMLFTVSKSTGHAGTRIGWALVKDRAIARKMTKFVELN TIGVSKDSQMRAAKVLAAVSDGYERRPEQTKETMTTPLRLFDFGRRKMVERWSMLRAAAA ASGIFSLPEETSGFCNFTKETAATNPAFAWLRCDREDVEDCAGFLRGHKILTRSGAQFGA DARYVRVSMLDRDDAFDIFINRLSSLK

Transcript Sequence

Transcript ID	Os01t0169800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3577473:3581859:-1 gene:Os01g0169800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FISH BONE, TRYPTOPHAN AMINOTRANSFERASE 2 description:Tryptophan aminotransferase, Indole-3-acetic acid (IAA) biosynthesis (Os01t0169800-01)
Sequence	ATGGCGGCATTGCGCGTGGGCACGAGGGCGGTGGAAGGGAGGTTCCAAGCGAGCAACGGC GGCGGCGGCGGTGGCGGCGGCATGGCGCCGTCGTCGCGCCTCGTCGCGGCGCACCGGGAA GCGAAGCCGAGGAGCAGCCACTCGGCGGCGCCGTGGAAGCTGCCGCGGCGGCGAGCCGGC GCCATGCCGCTGTGGCGCGTCGCGGTGTTCGCCTCCGTCGCATTGAACGTCGCCACCCTC GCACTCCTCCTCCACCACTACGCCACCTCTCCTCCTCCCCACCACCACCACCACGACGCC GGACTCGCCACTCGCAGCAGCGACGCCGCCGTCCACCGGCGAGCCAGGACGGCGTCGTCG ATGGCGCCGTCGACCGGCAAGCCGGCGGTGACGACGGATTCCGTTATCAACCTTGACCAC GGCGACCCGACCATGTTCGAGGAGTTCTGGAGGGAGACCGGCGACGCGGCGGAGGTCGTC ATCCCGGGGTGGCAGACGATGAGCTACTTCTCCGACGTGACCAACGTCTGCTGGTTCCTC GAGCCGGAGCTCGACCGCCAGGTGCGCCGCCTCCACCGAGTCGTCGGCAACGCCGCCGTC GACGGCTACCACGTCCTCGTCGGCACCGGCTCCACCCAGCTCTTCATGGCCGCGCTCTAC GCCCTCGCCCCCGACGCCGCCGCCGCTGCCGCCGGCGAGCCCATCAGCGTCGTCTCCACT GCGCCCTACTACTCGTCATACCCCGCCGTGACGGACTTCCTCCGGTCGGGGCTCTTCCGG TGGGCCGGCGACGCCGACGCCTTCAAAGGCGACTCCTACATTGAGCTGGTCTGCTCCCCG AACAATCCTGACGGCGCCATCCGTGAAGCTGTTCTTGATCCAAAGACCGGCAATGGCAGG ACGGTCCATGACCTGGCCTACTACTGGCCTCAGTACACCCCCATCACCAAGCGTGCTTCC CATGACATCATGCTCTTCACCGTCTCCAAGAGCACCGGCCATGCCGGGACCAGGATCGGG TGGGCGTTGGTGAAGGACCGGGCGATCGCGAGGAAGATGACGAAGTTTGTGGAGCTGAAC ACGATCGGGGTGTCCAAGGACTCGCAGATGCGGGCGGCCAAGGTGCTCGCCGCCGTCTCC GACGGCTACGAGCGGCGGCCGGAGCAGACGAAAGAGACGATGACCACTCCTCTTCGCCTG TTCGACTTTGGTCGACGCAAGATGGTGGAGCGGTGGAGCATGCTCCGCGCTGCTGCCGCC GCCTCCGGCATCTTCAGCCTCCCGGAGGAGACCTCCGGCTTCTGCAACTTCACCAAGGAG ACCGCCGCGACCAACCCTGCGTTCGCGTGGCTGCGGTGCGATAGGGAGGATGTGGAGGAT TGTGCGGGGTTTCTCCGTGGGCACAAGATCCTGACGAGGAGCGGGGCGCAGTTCGGGGCG GATGCGAGGTACGTGCGGGTGAGCATGCTCGACAGGGACGACGCGTTCGACATCTTCATC AACCGCCTCTCGTCGCTCAAGTGAAAGAAGACGGCGGAGAGAGAGAGGACGCTGCAGCGT GTTCGTCCGTGCGCTAGCAAGCAAAGCATGCCCATGACTCATGAGAGCATGAGTAGAACC GTTAACTGTGTATCTGTATCAGTATTTGGAGAGCCTTTTTGGTAGAGCTTCAGAGCATAA CCAAACGGTTTCAGCTTTACTCGAAATGGGAGTGAGGTTGATTGAAGTGCTATCACAGAA TGATCTAGAGATGTAGAGTTGGATTTAGACTATTTTACAGCTACACTTTAGAACCAACTC TTGAAGTTAAATTTGTAAGTTGAAGTCCTGCCAAATAGGTTCTCAGTAGTAGTAGTAGGT AGAAGAAGAGGAGCTTGCTTTTCTCTAGCTTTTCTTTTTCTCTTAAATATTTGTTTCTCG ATGTTGTGTTTTATGGTTAAGAATGGCCTGCAATGTAGATCAGTGCCTGCGTGATTTCAC ATACGGAAAATAAATAAATAAATGTTCTTGTTCTTCCTTTTTTGGAAGATCTAATGTTTC