Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0169500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:3559761:3568072:-1 gene:Os01g0169500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0169500-01);Hypothetical conserved gene. (Os01t0169500-02)
Sequence	TTGTGGAGCATTGGAACTTACAGGGAGAAAAATGTTGACCCTCTCTGGGTTAAAGCAAGA GGAACTGCTTTTCAGTCCTTGTCCCACTATAAGATCTCGCTTATTAAAGATGCTATTCCT GATTTCTGGCGGATAAATTATGAATGCTTTACCACTGAACGAAATCTGGAAGTTCTGAAA GCAATGGATAACTTCCAGGCCGAGATTATCAATTTTGAGCACATTAACCGTCGTCGATTG ACTACGGATAAAATAACCACAGTGCATAAATTTGAGAAGCTACTGGATGCTTTCCCTCAG GCGGTGTTTAAAGGAAAGTCAGCGCATCATCGGTTTCCTGGTGCAGCTCTTCTAACTCTC AATTTTACCCCGAAGGACATCCTTCATGAAGGGAAATCTAAGGATTTGCCTAGAGTACAT GCTGCATATGAACAAGCATTAGTGGAGATGGCTGAATCTATGTATATATCAAGAAATATG GTGGTAGCTCTTCTTGCACTGCATTCATGGAAATCATTTGTTTCAAATTGGATGCAAGCT GTTATTGCTTGTCTAGACACTAAAGAATCCTCAAAGTTGAACAAGGCTTCAAAAGCAGCT GATGATATATTTAAGATTCTGTGCAAGTGTGTTCCTGTATCCACTCCTAGTGTTGTTGTT AGCATTGCTCTTGCTATTGGAGCATTGTGCTTGGTTGTTCCTCCAACAGCCCATCTAGTA ATCTCTTCTGCATCAGATTTTCTTTTGAGATGGCTATTCCAATATGAGCATGAACATCAA CAGTGGTCCACGGCTCTTTCTCTGGGACTAATATCGAATTGTTTTCATCCCACGGACAAA AGGAGCAAGCTTCAGGTTATCAATGGACTCCTTGAGGTAATCTCAAAAACTGAAAGCTAC CTTGTAAAAGGAGCTTGTGGACTCGGATTGGGTTATTGTTGCCAAGCTCTTTTAGCCAGA GCAGATAATGCAGCTGATTCAGAATTAGAAGCGACTACACAACTTACTGAGCGTGCATCA GTTGAAGAAATTCTTCACACTTTGACGACTTCATTAGTTCAGCTATGTCCATTTTCATGC TATTCCCTCAAGAAGCTAAGTATTTGTGGAATAAAATCCTTGGAAGGAATGGAAGAAAAA TATGTTAGCTTAGAAGATGATCCTTGGGCTGTTGCAGGACTTGTTCTTGGCCTGGGAAAC TCTGTTGTTTCACTATATAGGCTTGGAGCTTATGAAGCTATTATTGAAGTCAAGAATATA TTGATATCATGGATACCAGATGTGGATTCTAGCTCTTTGTTATTTGATGAAGAAGATTCG GCATCGCTATGTATGGGCTCTTGCCTTGCCCTTCCATCTGTTTTAGCTTTTTGCCAGAAG GTGGAATTGCTGAATGATGACTTGGATGCTTTGTTCAATCGCTACACTTCTTTAGCTACT AATCTCCTGAGCCTTAAGAAATCTGGGACTATCTTTCAGAATTTGCTGATGGCGATCTGT ATTGGTGCTGGATCTTTCCTGTCTTCTATATTGAATGATGGGGTGCATGCTATGAAATTT ACTGATGTCAAAGATCTTCTTGACACTCTTAAACACATATATACCCATCCATATCCTCCT CTTGTCCATTTAGGAGGCATGCTTGGTACTGTCAACGCTTTTGGTGCTGGTGCTGGAGAC CTCACTGGGATCTGTCGGCAGCCGACAAATTCACAAATTAAGCACGAAAAGGAGTCATCT TTGGTGAGAGGTCCTGTACTCACAAGTTCTGTTGGTGAGACTCTTTCAACGTCAATGATT CAGGAGATATTTCTTCTTGCCAAGGATGCTGAGGATGACCACATAAAAGATTATGCTGCA TGGGCTATTTCATTTCTTAGAAGCAGGTGGCTATCAAAGAATCAGATTATTTTTGATGAT GATTGTTCTCAAAGAAATTCTAGTGATTCCAATCAATCGACAAGTTTTTCTGATGAAAGC TTAGTGTGGAACTTAAGTCAGTGGTTGAGGGATCTTAACTTCGAAAAGCCTGATAGTATG GTGTCAACAAGTACAGTCGCAACTGTTTTGAGATGCCTTTCCAAAGCTCCTAGATTGCCA TCTATAGACTGGGGGGTTATTGTGCGGCGGTGCATGAATGTTGAGGCACACATTCCTGAT ATGTTGACGAATCATCATGATCCTAAATTATTGAGGGAAGAATGCCTATATATTTCTCTA GCTCATGCAAGTCATATCAGTCCTCTTCTGCACTTTATTGATGATCTGACAGACTTATCC AGATTCAGGAGATTAGAAATAAATTTGCAGTCCATTTTGCTCCAATATTTATCAACCCTA ATGAAACTCTTCTCTCTCTCAAGATTAGACAAATTGTCTGAGGATTTAACTGAGTACTTG TATTCCCCCACATCTTCGTACTTGGATTACTCATCTGAGCAGAGAAGCATGTTAAGAACA TCATTCTGGAAGGGCATTCGCGAGTGTCTAGTGGAGGATGTATCTGAAGAGTCTAGTGGT TTCTCATGTATTAAGAAGTGCATTCAAAGCTTGTCACCTCTCCTGAGTCTCCATAAAGAT GGTCAGCCTGAATTCATAGAGGAGTGGTCTGCTGCTATCAAATGCCTTACAGTTGCACAG AAAGGTTTGCTGGGTGATATGCTGCAGGTCGAAATTTCGTCATCCTTCAATGAGCTAGAG CATATTGATGTGGCCAAAAAGATAATCATCAGGGCAAGAATGTGTTCTAGCGGTTGTGGT TCTGTAGATGAGCTGGGGAACATAAAGACTACAATACTGAGTACAAGGCTTGATGGTGTC TGGTGGAATGTCCTTGTTGAAGTTGCTGGTGCTCTATATTATGCTGATAGTCGTATGAAA AAGCAGTGGCTTCTGGATGCATTAGATATTGGCTGTGTTACAGCCCATCCCTCCACGGTA CTCCATTTCGTTGGCCTGCTATGTGGTAGCTGCTGCATCTATATGCCACTTCTCATTGTT AACCCAACAAATGTACTGAGTGACTTGCCTGTCACCCTTCCTTCGTTTCTCTCTAGCAGC ATTTGGGATGACCTCCGGAACTCTGTTGCTGATAAGTTATGGTTGTTGACCGCTCGCATC TACACTTGGGCAGAACAGCTGACTCATAGTGTCGGCCTCGCACGCCATGACCATATTCAT GGAAGTGAAGCTGAAATGGCTATTTTTCTTGCCAATATTCTGCGCTGTACTTGCATTGCA GTGGAAGATCACTTGGCTGTTGAAAAGAAGCTAAAACTTGCAAACCTGGAGGCTCTATGA

Peptide Sequence

PEP ID	Os01t0169500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:3559761:3568072:-1 gene:Os01g0169500 transcript:Os01t0169500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0169500-01);Hypothetical conserved gene. (Os01t0169500-02)
Sequence	LWSIGTYREKNVDPLWVKARGTAFQSLSHYKISLIKDAIPDFWRINYECFTTERNLEVLK AMDNFQAEIINFEHINRRRLTTDKITTVHKFEKLLDAFPQAVFKGKSAHHRFPGAALLTL NFTPKDILHEGKSKDLPRVHAAYEQALVEMAESMYISRNMVVALLALHSWKSFVSNWMQA VIACLDTKESSKLNKASKAADDIFKILCKCVPVSTPSVVVSIALAIGALCLVVPPTAHLV ISSASDFLLRWLFQYEHEHQQWSTALSLGLISNCFHPTDKRSKLQVINGLLEVISKTESY LVKGACGLGLGYCCQALLARADNAADSELEATTQLTERASVEEILHTLTTSLVQLCPFSC YSLKKLSICGIKSLEGMEEKYVSLEDDPWAVAGLVLGLGNSVVSLYRLGAYEAIIEVKNI LISWIPDVDSSSLLFDEEDSASLCMGSCLALPSVLAFCQKVELLNDDLDALFNRYTSLAT NLLSLKKSGTIFQNLLMAICIGAGSFLSSILNDGVHAMKFTDVKDLLDTLKHIYTHPYPP LVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQIKHEKESSLVRGPVLTSSVGETLSTSMI QEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSKNQIIFDDDCSQRNSSDSNQSTSFSDES LVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCLSKAPRLPSIDWGVIVRRCMNVEAHIPD MLTNHHDPKLLREECLYISLAHASHISPLLHFIDDLTDLSRFRRLEINLQSILLQYLSTL MKLFSLSRLDKLSEDLTEYLYSPTSSYLDYSSEQRSMLRTSFWKGIRECLVEDVSEESSG FSCIKKCIQSLSPLLSLHKDGQPEFIEEWSAAIKCLTVAQKGLLGDMLQVEISSSFNELE HIDVAKKIIIRARMCSSGCGSVDELGNIKTTILSTRLDGVWWNVLVEVAGALYYADSRMK KQWLLDALDIGCVTAHPSTVLHFVGLLCGSCCIYMPLLIVNPTNVLSDLPVTLPSFLSSS IWDDLRNSVADKLWLLTARIYTWAEQLTHSVGLARHDHIHGSEAEMAIFLANILRCTCIA VEDHLAVEKKLKLANLEAL

Transcript Sequence

Transcript ID	Os01t0169500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3559761:3568072:-1 gene:Os01g0169500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0169500-01);Hypothetical conserved gene. (Os01t0169500-02)
Sequence	TTGTGGAGCATTGGAACTTACAGGGAGAAAAATGTTGACCCTCTCTGGGTTAAAGCAAGA GGAACTGCTTTTCAGTCCTTGTCCCACTATAAGATCTCGCTTATTAAAGATGCTATTCCT GATTTCTGGCGGATAAATTATGAATGCTTTACCACTGAACGAAATCTGGAAGTTCTGAAA GCAATGGATAACTTCCAGGCCGAGATTATCAATTTTGAGCACATTAACCGTCGTCGATTG ACTACGGATAAAATAACCACAGTGCATAAATTTGAGAAGCTACTGGATGCTTTCCCTCAG GCGGTGTTTAAAGGAAAGTCAGCGCATCATCGGTTTCCTGGTGCAGCTCTTCTAACTCTC AATTTTACCCCGAAGGACATCCTTCATGAAGGGAAATCTAAGGATTTGCCTAGAGTACAT GCTGCATATGAACAAGCATTAGTGGAGATGGCTGAATCTATGTATATATCAAGAAATATG GTGGTAGCTCTTCTTGCACTGCATTCATGGAAATCATTTGTTTCAAATTGGATGCAAGCT GTTATTGCTTGTCTAGACACTAAAGAATCCTCAAAGTTGAACAAGGCTTCAAAAGCAGCT GATGATATATTTAAGATTCTGTGCAAGTGTGTTCCTGTATCCACTCCTAGTGTTGTTGTT AGCATTGCTCTTGCTATTGGAGCATTGTGCTTGGTTGTTCCTCCAACAGCCCATCTAGTA ATCTCTTCTGCATCAGATTTTCTTTTGAGATGGCTATTCCAATATGAGCATGAACATCAA CAGTGGTCCACGGCTCTTTCTCTGGGACTAATATCGAATTGTTTTCATCCCACGGACAAA AGGAGCAAGCTTCAGGTTATCAATGGACTCCTTGAGGTAATCTCAAAAACTGAAAGCTAC CTTGTAAAAGGAGCTTGTGGACTCGGATTGGGTTATTGTTGCCAAGCTCTTTTAGCCAGA GCAGATAATGCAGCTGATTCAGAATTAGAAGCGACTACACAACTTACTGAGCGTGCATCA GTTGAAGAAATTCTTCACACTTTGACGACTTCATTAGTTCAGCTATGTCCATTTTCATGC TATTCCCTCAAGAAGCTAAGTATTTGTGGAATAAAATCCTTGGAAGGAATGGAAGAAAAA TATGTTAGCTTAGAAGATGATCCTTGGGCTGTTGCAGGACTTGTTCTTGGCCTGGGAAAC TCTGTTGTTTCACTATATAGGCTTGGAGCTTATGAAGCTATTATTGAAGTCAAGAATATA TTGATATCATGGATACCAGATGTGGATTCTAGCTCTTTGTTATTTGATGAAGAAGATTCG GCATCGCTATGTATGGGCTCTTGCCTTGCCCTTCCATCTGTTTTAGCTTTTTGCCAGAAG GTGGAATTGCTGAATGATGACTTGGATGCTTTGTTCAATCGCTACACTTCTTTAGCTACT AATCTCCTGAGCCTTAAGAAATCTGGGACTATCTTTCAGAATTTGCTGATGGCGATCTGT ATTGGTGCTGGATCTTTCCTGTCTTCTATATTGAATGATGGGGTGCATGCTATGAAATTT ACTGATGTCAAAGATCTTCTTGACACTCTTAAACACATATATACCCATCCATATCCTCCT CTTGTCCATTTAGGAGGCATGCTTGGTACTGTCAACGCTTTTGGTGCTGGTGCTGGAGAC CTCACTGGGATCTGTCGGCAGCCGACAAATTCACAAATTAAGCACGAAAAGGAGTCATCT TTGGTGAGAGGTCCTGTACTCACAAGTTCTGTTGGTGAGACTCTTTCAACGTCAATGATT CAGGAGATATTTCTTCTTGCCAAGGATGCTGAGGATGACCACATAAAAGATTATGCTGCA TGGGCTATTTCATTTCTTAGAAGCAGGTGGCTATCAAAGAATCAGATTATTTTTGATGAT GATTGTTCTCAAAGAAATTCTAGTGATTCCAATCAATCGACAAGTTTTTCTGATGAAAGC TTAGTGTGGAACTTAAGTCAGTGGTTGAGGGATCTTAACTTCGAAAAGCCTGATAGTATG GTGTCAACAAGTACAGTCGCAACTGTTTTGAGATGCCTTTCCAAAGCTCCTAGATTGCCA TCTATAGACTGGGGGGTTATTGTGCGGCGGTGCATGAATGTTGAGGCACACATTCCTGAT ATGTTGACGAATCATCATGATCCTAAATTATTGAGGGAAGAATGCCTATATATTTCTCTA GCTCATGCAAGTCATATCAGTCCTCTTCTGCACTTTATTGATGATCTGACAGACTTATCC AGATTCAGGAGATTAGAAATAAATTTGCAGTCCATTTTGCTCCAATATTTATCAACCCTA ATGAAACTCTTCTCTCTCTCAAGATTAGACAAATTGTCTGAGGATTTAACTGAGTACTTG TATTCCCCCACATCTTCGTACTTGGATTACTCATCTGAGCAGAGAAGCATGTTAAGAACA TCATTCTGGAAGGGCATTCGCGAGTGTCTAGTGGAGGATGTATCTGAAGAGTCTAGTGGT TTCTCATGTATTAAGAAGTGCATTCAAAGCTTGTCACCTCTCCTGAGTCTCCATAAAGAT GGTCAGCCTGAATTCATAGAGGAGTGGTCTGCTGCTATCAAATGCCTTACAGTTGCACAG AAAGGTTTGCTGGGTGATATGCTGCAGGTCGAAATTTCGTCATCCTTCAATGAGCTAGAG CATATTGATGTGGCCAAAAAGATAATCATCAGGGCAAGAATGTGTTCTAGCGGTTGTGGT TCTGTAGATGAGCTGGGGAACATAAAGACTACAATACTGAGTACAAGGCTTGATGGTGTC TGGTGGAATGTCCTTGTTGAAGTTGCTGGTGCTCTATATTATGCTGATAGTCGTATGAAA AAGCAGTGGCTTCTGGATGCATTAGATATTGGCTGTGTTACAGCCCATCCCTCCACGGTA CTCCATTTCGTTGGCCTGCTATGTGGTAGCTGCTGCATCTATATGCCACTTCTCATTGTT AACCCAACAAATGTACTGAGTGACTTGCCTGTCACCCTTCCTTCGTTTCTCTCTAGCAGC ATTTGGGATGACCTCCGGAACTCTGTTGCTGATAAGTTATGGTTGTTGACCGCTCGCATC TACACTTGGGCAGAACAGCTGACTCATAGTGTCGGCCTCGCACGCCATGACCATATTCAT GGAAGTGAAGCTGAAATGGCTATTTTTCTTGCCAATATTCTGCGCTGTACTTGCATTGCA GTGGAAGATCACTTGGCTGTTGAAAAGAAGCTAAAACTTGCAAACCTGGAGGCTCTATGA TCCAAGGGAGAAGTGTTTTCATTTTTATCTTATCTATTCTGTATCATATATATGTTTAAA CTCGTTCTTCTTGTTCCCCACCGATGATGTAGCACCGCTTTATTTCTGTACATAATTCAG CTCAACTATCTCAACCTGGACCAGAAATTAAATTTGATTTCCCTAGAATGAAGGGGACTT