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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0169400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3551051:3553146:-1 gene:Os01g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAMOSA 2 description:Similar to LOB domain protein 25. (Os01t0169400-01)
Sequence

ATGGCATCCTCGTCGAGCACCAGCAACTCCGCCATCTCCTCGGTGGTCGCGTCGGCGGTG
GCCACGACGACGCCGGGCGCCGGATCGCCGTGCGCGGCGTGCAAGTTCCTGCGGCGGAAG
TGCCTGCCGGGCTGCGTGTTCGCTCCTTACTTCCCGCCGGAGGAGCCGCAGAAGTTCGCC
AACGTCCACAAGGTGTTCGGCGCCAGTAACGTCACCAAGCTCCTCAACGAGCTGCTGCCG
CACCAGCGGGAGGACGCCGTGAGCTCGCTCGCGTACGAGGCCGAGGCCCGCGTCAAGGAC
CCCGTCTACGGCTGCGTCGGCGCCATCTCCGTCCTCCAGCGCCAGGTCCACCGCCTCCAG
AAGGAGCTCGACACCGCGCACGCCGAGCTCCTCCGCTACGCCTGCGGCGAGGTCGGCATC
CCCACCGCGCTCCCCGTCACCGCCGCCCCGAGGCTCGCCGCGGCAATGCCGGCACCAGGC
CAGCTCGCCGCCGCCGTCAGTGCCGGGATGTACGGCGGCGGCCGGAGGCTCGGGGTCATC
GACGGCGGCGGGATAGCGCCGCCTTCCCCCCACACGGCCGGGTGCTACTACGCCCGCAAC
AACAACGCCGGGAGCATCGGCGCTGACGTGGCGCCCGTCCTACCTTACGCTTCCGTGGCT
AATTGGACAGTGAACGCCATTAGCACCACCACCACCAACTCAGGATCAGAGAGCATTGGG
ATGGATCACAAGGAAGGAGGAGACAGCAGCATGTGA

Peptide Sequence

PEP ID

Os01t0169400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3551051:3553146:-1 gene:Os01g0169400 transcript:Os01t0169400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAMOSA 2 description:Similar to LOB domain protein 25. (Os01t0169400-01)
Sequence

MASSSSTSNSAISSVVASAVATTTPGAGSPCAACKFLRRKCLPGCVFAPYFPPEEPQKFA
NVHKVFGASNVTKLLNELLPHQREDAVSSLAYEAEARVKDPVYGCVGAISVLQRQVHRLQ
KELDTAHAELLRYACGEVGIPTALPVTAAPRLAAAMPAPGQLAAAVSAGMYGGGRRLGVI
DGGGIAPPSPHTAGCYYARNNNAGSIGADVAPVLPYASVANWTVNAISTTTTNSGSESIG
MDHKEGGDSSM

Transcript Sequence

Transcript ID

Os01t0169400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3551051:3553146:-1 gene:Os01g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAMOSA 2 description:Similar to LOB domain protein 25. (Os01t0169400-01)
Sequence

AATACTGGGCCTTGCTTTTTCATATTTTGTTGCCTCTACATCTCACCTTTCCCTTGTGCT
GCAGTTGTGTATAGTAGGAGAAGCTGATTTCTATATCTCTCTTCCCCTCTCTCCTAAAGA
TCACTACCAGAAAGAAGTCATGCTCTCCTGCTTGATCCTTGGATATCAGTGGATCTTGGA
AGAAACAAGCAGCAACTAAGAAAATCTGCCACATATTGCTGTTGTCTTTCTTCGTCAGAT
CATCAGATCTATCCTCTTCGACCACAAATAGGTGTAGCTAGCTAGCTCGCCGGAAATGGC
ATCCTCGTCGAGCACCAGCAACTCCGCCATCTCCTCGGTGGTCGCGTCGGCGGTGGCCAC
GACGACGCCGGGCGCCGGATCGCCGTGCGCGGCGTGCAAGTTCCTGCGGCGGAAGTGCCT
GCCGGGCTGCGTGTTCGCTCCTTACTTCCCGCCGGAGGAGCCGCAGAAGTTCGCCAACGT
CCACAAGGTGTTCGGCGCCAGTAACGTCACCAAGCTCCTCAACGAGCTGCTGCCGCACCA
GCGGGAGGACGCCGTGAGCTCGCTCGCGTACGAGGCCGAGGCCCGCGTCAAGGACCCCGT
CTACGGCTGCGTCGGCGCCATCTCCGTCCTCCAGCGCCAGGTCCACCGCCTCCAGAAGGA
GCTCGACACCGCGCACGCCGAGCTCCTCCGCTACGCCTGCGGCGAGGTCGGCATCCCCAC
CGCGCTCCCCGTCACCGCCGCCCCGAGGCTCGCCGCGGCAATGCCGGCACCAGGCCAGCT
CGCCGCCGCCGTCAGTGCCGGGATGTACGGCGGCGGCCGGAGGCTCGGGGTCATCGACGG
CGGCGGGATAGCGCCGCCTTCCCCCCACACGGCCGGGTGCTACTACGCCCGCAACAACAA
CGCCGGGAGCATCGGCGCTGACGTGGCGCCCGTCCTACCTTACGCTTCCGTGGCTAATTG
GACAGTGAACGCCATTAGCACCACCACCACCAACTCAGGATCAGAGAGCATTGGGATGGA
TCACAAGGAAGGAGGAGACAGCAGCATGTGAATTGAAGCGCGGCAAATAATGTGGAGATC
TGCGCTTTGGCCTTGATGAGAGAGGATCGGAGAGGCTTCAGGAAGATGGCAGCCCATTCA
TCCCAGGTTAATTAAGAGTTAAGAAGCAACCTATCTATCTATCTATATATAGCCAGCATG
AATTATATATATCATCTCCCCGTCCCTTTTTGCATGTTGTGCAAAACCATACTTTGGAGT
TCTATATGTAATCGAATCGAGATCTTGATCTCTCGTCTTTTCATGATTAATTCGCGTTTT
TCGC