Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0168800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3516766:3519077:-1 gene:Os01g0168800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0168800-01)
Sequence

ATGGGGTTCGCCGTGTCTCTCATCAGCGCCATGTTCCGGCGGATGTTCGCCTCCGCCGGC
CTCCGGCCAGGCTCCGCCGTCGTCGACGACGACGGCACGACGCTCCACTTCTGGGCGCAC
TCCTCTCTCCTGATCCTCCCTTCCAAGAATGGCGCCGCCGCCGCCGCCGCGGCGGCGGGG
CGGCGGCCGGTGGTGGTGCTCGTCCATGGCTTCGGGCCGGACCCGACGTGGCAGTGGGGC
GCGCAGGTGGGCCCGCTCTCCCGCCACTTCGACCTGGTGGTCCCGACCCTCCTCTTCTTC
GGCGCCTCCACCACCAGCGCCGCGCCGCGCTCCGACGCGTTCCAGGCAGCCGCCATCGCC
GCGCTCCTCACCAGCGGCGGCGCGCACCTCCCAGGCCTCGGCGGCGAACGCCGGGAACTG
CACATCGTGGGCACCAGCTACGGCGGGCTGGTGGCGCGGCACCTGGCGCGGGCGCTGTCG
ACGTCGGCCGGCGACGGCCAGGTGGAGGTGGGGAAGGTGGTGCTGTGCGACGCCGACCTG
GCGAAGGGGGCGGAGGACGACGCGGCGCTGGCGGCGAAGGGCGGCGTGGCGGAGGTGACG
GAGCTGATGGCGCCGGCGGACGGGAAGGCGTTCCGGCGGCTGATGGCGCTCTGCGTCCAC
CGCCCGCCCAAGTACATCCCCGACTTCCTCGTCCGCGACCTCCTCCGGAAATATTTCGCG
GACAAAAGAGAGGAGAAGATCCGGCTGATCAAAGAGATCGTCACCGAGGAACAAGACTCG
CAGCTTAATTCTCCTCTCCCTCAAGAAATTTTGATCATCTGGGGGGAGTTCGACCAGATT
TTCCCTGTGGAGAAAGCACACAAAGTGAAAGAGATGCTTGGGGAGAAGGCGACGGTGAAG
ATAATACCGAACACGGGGCACCTGGCGCACCAGGAGGATCCCAAGATGTTCAACGATATC
CTGCTCAAGTTCTTGCTGCCTTCTCCTGCCGTCGCCAATGGTGCAAAATAA

Peptide Sequence

PEP ID

Os01t0168800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3516766:3519077:-1 gene:Os01g0168800 transcript:Os01t0168800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0168800-01)
Sequence

MGFAVSLISAMFRRMFASAGLRPGSAVVDDDGTTLHFWAHSSLLILPSKNGAAAAAAAAG
RRPVVVLVHGFGPDPTWQWGAQVGPLSRHFDLVVPTLLFFGASTTSAAPRSDAFQAAAIA
ALLTSGGAHLPGLGGERRELHIVGTSYGGLVARHLARALSTSAGDGQVEVGKVVLCDADL
AKGAEDDAALAAKGGVAEVTELMAPADGKAFRRLMALCVHRPPKYIPDFLVRDLLRKYFA
DKREEKIRLIKEIVTEEQDSQLNSPLPQEILIIWGEFDQIFPVEKAHKVKEMLGEKATVK
IIPNTGHLAHQEDPKMFNDILLKFLLPSPAVANGAK

Transcript Sequence

Transcript ID

Os01t0168800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3516766:3519077:-1 gene:Os01g0168800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os01t0168800-01)
Sequence

GGAGCCAAACTGATCGTTCAGTCACAGACACAGCTCAGAGCTCTCGAGAGAGAGCGGCGG
CCATGGGGTTCGCCGTGTCTCTCATCAGCGCCATGTTCCGGCGGATGTTCGCCTCCGCCG
GCCTCCGGCCAGGCTCCGCCGTCGTCGACGACGACGGCACGACGCTCCACTTCTGGGCGC
ACTCCTCTCTCCTGATCCTCCCTTCCAAGAATGGCGCCGCCGCCGCCGCCGCGGCGGCGG
GGCGGCGGCCGGTGGTGGTGCTCGTCCATGGCTTCGGGCCGGACCCGACGTGGCAGTGGG
GCGCGCAGGTGGGCCCGCTCTCCCGCCACTTCGACCTGGTGGTCCCGACCCTCCTCTTCT
TCGGCGCCTCCACCACCAGCGCCGCGCCGCGCTCCGACGCGTTCCAGGCAGCCGCCATCG
CCGCGCTCCTCACCAGCGGCGGCGCGCACCTCCCAGGCCTCGGCGGCGAACGCCGGGAAC
TGCACATCGTGGGCACCAGCTACGGCGGGCTGGTGGCGCGGCACCTGGCGCGGGCGCTGT
CGACGTCGGCCGGCGACGGCCAGGTGGAGGTGGGGAAGGTGGTGCTGTGCGACGCCGACC
TGGCGAAGGGGGCGGAGGACGACGCGGCGCTGGCGGCGAAGGGCGGCGTGGCGGAGGTGA
CGGAGCTGATGGCGCCGGCGGACGGGAAGGCGTTCCGGCGGCTGATGGCGCTCTGCGTCC
ACCGCCCGCCCAAGTACATCCCCGACTTCCTCGTCCGCGACCTCCTCCGGAAATATTTCG
CGGACAAAAGAGAGGAGAAGATCCGGCTGATCAAAGAGATCGTCACCGAGGAACAAGACT
CGCAGCTTAATTCTCCTCTCCCTCAAGAAATTTTGATCATCTGGGGGGAGTTCGACCAGA
TTTTCCCTGTGGAGAAAGCACACAAAGTGAAAGAGATGCTTGGGGAGAAGGCGACGGTGA
AGATAATACCGAACACGGGGCACCTGGCGCACCAGGAGGATCCCAAGATGTTCAACGATA
TCCTGCTCAAGTTCTTGCTGCCTTCTCCTGCCGTCGCCAATGGTGCAAAATAATCAAGTG
TGCTAATACAATTATACAATGCGATCTGCTTTTCCGGCCATCGGGTACTCGGGTGTAATG
GTTCAGGATCTTTGATTCGTGTTTCTTAAATTTCGAATTGTGTAATTGGTTGCATTTGAA
TTTATCATGGTCGAGAGAGGAGAGACATCGAAATGTTTTGTTTTGGTTCAGCTACTTTGC
GAAGTTATTTTGGAGTACGCTCAATGTAAGAATTTATAAAGATCTTCGATGTC