Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0168300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3493411:3496559:-1 gene:Os01g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0168300-01)
Sequence

ATGGCGGCCGCCCTCTCCTCCTCCCGGAGGGCCCTCCACGCCCTCCACCGCCGCCTCCTC
CTCCACCCCCTCCCCTCCCGCCACGCTCCCCCCATCCCCCGCCACCACTTCCCCTCTCCT
CCCTCCTCCTCCTCCTCCTCCTCCCGCTTCTTCACCACCACGCGCCCCGACGCGAGGCTA
CTACAGCTGCATGCGCGGCGGCTCGTGGTGGGCGGGGCAAGGTCGTTCGCGGCGGGCGTC
GGCGGCGGGGGGTCGTCGAAGCTGGCGCCGCTGGGGCAGGGGGTGAAGGGGCTGGGGCTG
GGGCGGCCGCTGGACGCGGCCAAGAACGCGGCGGCGAGGTACCGGGAGGCCGTGGGGCTG
CAGGTGGAGGCGTTCTGGAGGCGCAACTACATGCTGCTCGTCGGCGCCGGGGCGGTCGTC
GTCTGCATCGCGCTGTGGAGGGTCATGTTCGGCATCGCCAGCACCTTCGTCGGGCTCTCC
GAGGGCATGGCCAAGTACGGCTTCCTCGCCCTCGCCACCGCCATGGTGGCGTTCGCCGGC
ATGTACACACGCTCAAGATTCACCATAAATCCTGATAAGGTTTATAGAATAGCAATGACA
AAGCTCAACACATCTGCTGCAATCCTTGAAGTCATGGGTGCACCCTTAGCCGGTACTGAT
GTCAGAGCATATGTCATGTCTGGAGGGGGGCCTAAACTCAAGGACTTCAAATTTAGGCTT
GGTGGCAAAAGGTGCTTTCTGATCTTCCCCATTAAAGGATCAGAAAGAAAAGGCCTTGTA
AGTGTTGAGGTCAAGAAGAAAAAGGGACAGTACGACATGAAGCTACTCGCTGTTGACATA
CCAATGGCGTCAGGACCTGATCAGCGGTTATTCCTTGTCGGTGACGAGCAGGAGTACAAG
GTGGGTGGGGGTTTGATATCTGAGCTGCGGGACCCTATAGTAAAAGCTATGGCTGCAGAG
AAGGAGTTTGATTATCTTGATGAAAGAGAGGATGCGGAGGATGAAGCGAGGGAGCGTGAG
GAGGCTGAGCGAAGACAACAGGAAGAGGAAGCTGAAGCATTGAGGCGTGAGGAGGAAAGA
TTACGTGAGGAGTACGAAGAAAGGAAGCGGCAAGAAGCTGAGAACCTGGAGAAAACCACT
TGA

Peptide Sequence

PEP ID

Os01t0168300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3493411:3496559:-1 gene:Os01g0168300 transcript:Os01t0168300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0168300-01)
Sequence

MAAALSSSRRALHALHRRLLLHPLPSRHAPPIPRHHFPSPPSSSSSSSRFFTTTRPDARL
LQLHARRLVVGGARSFAAGVGGGGSSKLAPLGQGVKGLGLGRPLDAAKNAAARYREAVGL
QVEAFWRRNYMLLVGAGAVVVCIALWRVMFGIASTFVGLSEGMAKYGFLALATAMVAFAG
MYTRSRFTINPDKVYRIAMTKLNTSAAILEVMGAPLAGTDVRAYVMSGGGPKLKDFKFRL
GGKRCFLIFPIKGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLVGDEQEYK
VGGGLISELRDPIVKAMAAEKEFDYLDEREDAEDEAREREEAERRQQEEEAEALRREEER
LREEYEERKRQEAENLEKTT

Transcript Sequence

Transcript ID

Os01t0168300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3493411:3496559:-1 gene:Os01g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0168300-01)
Sequence

CCCCTTCGTCTCCTCCGCCGCCGCGAACCCGATCTCGATCCCCTCCCATGGCGGCCGCCC
TCTCCTCCTCCCGGAGGGCCCTCCACGCCCTCCACCGCCGCCTCCTCCTCCACCCCCTCC
CCTCCCGCCACGCTCCCCCCATCCCCCGCCACCACTTCCCCTCTCCTCCCTCCTCCTCCT
CCTCCTCCTCCCGCTTCTTCACCACCACGCGCCCCGACGCGAGGCTACTACAGCTGCATG
CGCGGCGGCTCGTGGTGGGCGGGGCAAGGTCGTTCGCGGCGGGCGTCGGCGGCGGGGGGT
CGTCGAAGCTGGCGCCGCTGGGGCAGGGGGTGAAGGGGCTGGGGCTGGGGCGGCCGCTGG
ACGCGGCCAAGAACGCGGCGGCGAGGTACCGGGAGGCCGTGGGGCTGCAGGTGGAGGCGT
TCTGGAGGCGCAACTACATGCTGCTCGTCGGCGCCGGGGCGGTCGTCGTCTGCATCGCGC
TGTGGAGGGTCATGTTCGGCATCGCCAGCACCTTCGTCGGGCTCTCCGAGGGCATGGCCA
AGTACGGCTTCCTCGCCCTCGCCACCGCCATGGTGGCGTTCGCCGGCATGTACACACGCT
CAAGATTCACCATAAATCCTGATAAGGTTTATAGAATAGCAATGACAAAGCTCAACACAT
CTGCTGCAATCCTTGAAGTCATGGGTGCACCCTTAGCCGGTACTGATGTCAGAGCATATG
TCATGTCTGGAGGGGGGCCTAAACTCAAGGACTTCAAATTTAGGCTTGGTGGCAAAAGGT
GCTTTCTGATCTTCCCCATTAAAGGATCAGAAAGAAAAGGCCTTGTAAGTGTTGAGGTCA
AGAAGAAAAAGGGACAGTACGACATGAAGCTACTCGCTGTTGACATACCAATGGCGTCAG
GACCTGATCAGCGGTTATTCCTTGTCGGTGACGAGCAGGAGTACAAGGTGGGTGGGGGTT
TGATATCTGAGCTGCGGGACCCTATAGTAAAAGCTATGGCTGCAGAGAAGGAGTTTGATT
ATCTTGATGAAAGAGAGGATGCGGAGGATGAAGCGAGGGAGCGTGAGGAGGCTGAGCGAA
GACAACAGGAAGAGGAAGCTGAAGCATTGAGGCGTGAGGAGGAAAGATTACGTGAGGAGT
ACGAAGAAAGGAAGCGGCAAGAAGCTGAGAACCTGGAGAAAACCACTTGACACAATTAAC
CGCATCGATTTTTTCGTGTTGTGCATTTTGTTCTTCCCCAACACTCCACACTAAGTAGCA
ACCAACGTTTCAACAGCGAC