Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0167900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3473846:3477048:-1 gene:Os01g0167900 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os01t0167900-01)
Sequence	ATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGACAGT CACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAGCAA GTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCGCAG ATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATGTAC CGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCTACA AGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCCTCA CCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGTTTC GACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAGCCT GAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGATGGC ATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTGAAC CAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGAGCTTGAGGTGC CATTGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAGCTA CAGTCTTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAAGAG CACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAGGAA GAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAAATT GACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTGAGC AACAGTTCGGTGACAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTTGAA GAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCAAAC TCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAGGAG AAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAATCC AAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTAGAG CAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAG

Peptide Sequence

PEP ID	Os01t0167900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3473846:3477048:-1 gene:Os01g0167900 transcript:Os01t0167900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os01t0167900-01)
Sequence	MKPPLERNPTKKRHSWWWDSHISPKNSKWLAENLEEMDKQVKEMLQLIEEDGDSFAKKAQ MYYQRRPMLITHVENFYRMYRALAERYDNVTGELRKNIPTRLQYQGSLAGSDSELQRSPS PSPEPQKSWTREQSPRAAGFDVFLSNKSNGSPSPASRKEPEDLASQSESDAKSEDGEDDG IAYTLHQRVLELEDELNTVNQKLHDANEKLEVLEEKSLRCHCDSKENGNGADQSAINEKL QSSQEEINNIKNSLEVLSEEHSRLLGQNKKLEAEIVNLKEEIASDRQQYEEKLSRSDAEI DKCRQELADASEKLLQEKLSNSSVTAELQETIESIRIKLEEVSEEKLLVENKFKQLEEAN SEAEKYNQELSHATEKLSEEKFRHEAEILALNQAIENLKSKLESIAKEKSLLKSWFADLE QVVERGRRIFPE

Transcript Sequence

Transcript ID	Os01t0167900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3473846:3477048:-1 gene:Os01g0167900 gene_biotype:protein_coding transcript_biotype:protein_coding description:KIP1-like domain containing protein. (Os01t0167900-01)
Sequence	AGTAATACACATAGTAGTAGGAGTAGGTGGGCTGTAGTCATCTCTGCTGCCACCGTCGTC TCGTGCCTTGCATGTTTCCGAATCTCTCTGTTACTCTCCTACGCGTTTGCTTCAAGCTTT GACCGAGAAGCACCAATCCAGCTACATGTTCTTGACCTGTTCTTCTTCTTCCTGCCTCTG TATGGTGTTTTGAATGGTCAGATTTGGTCTTCGTCATGAACAGAAGCTGAGATCTTTGGT GCAGGATCCTCACCTCCGGTTCTGAAAGAACCCCTGTTTCCCAGTTTTGAAGATACCTGA ACAATGAAGCCACCTTTGGAGAGGAACCCTACCAAGAAGCGCCACTCGTGGTGGTGGGAC AGTCACATTAGCCCTAAGAACTCTAAATGGCTTGCAGAAAATCTTGAAGAAATGGACAAG CAAGTGAAGGAAATGCTGCAGCTTATTGAGGAGGATGGCGATTCCTTCGCGAAGAAAGCG CAGATGTACTACCAGAGGCGTCCAATGCTCATCACCCATGTTGAAAATTTCTACCGGATG TACCGTGCTCTAGCTGAGCGATACGACAATGTCACTGGTGAATTGCGCAAGAACATCCCT ACAAGGCTGCAGTATCAGGGATCCTTGGCAGGTTCAGACTCTGAGCTGCAGAGGTCACCC TCACCATCTCCTGAACCACAGAAGTCCTGGACAAGGGAGCAGAGCCCAAGGGCCGCCGGT TTCGACGTCTTCCTGTCCAACAAGAGCAATGGCTCACCCTCACCGGCCTCAAGGAAGGAG CCTGAGGATTTGGCTTCACAGTCAGAATCTGATGCAAAGTCTGAAGATGGTGAGGATGAT GGCATTGCCTACACATTGCACCAGAGAGTTCTTGAGCTTGAGGATGAGCTCAACACCGTG AACCAGAAACTGCACGACGCAAATGAAAAACTTGAGGTTCTGGAAGAGAAGAGCTTGAGG TGCCATTGTGATTCTAAAGAAAATGGAAACGGTGCTGATCAAAGTGCAATAAATGAGAAG CTACAGTCTTCACAAGAGGAGATTAACAATATCAAAAACAGCCTTGAAGTTTTGTCGGAA GAGCACTCTAGGCTGTTGGGACAGAACAAGAAACTGGAGGCTGAAATTGTCAATCTGAAG GAAGAAATTGCTTCAGATAGACAGCAATATGAAGAGAAGCTCTCTCGTAGTGATGCTGAA ATTGACAAGTGCAGGCAAGAACTTGCTGATGCTTCTGAGAAGTTGCTGCAAGAGAAGTTG AGCAACAGTTCGGTGACAGCTGAGCTGCAAGAAACGATTGAAAGCATCAGGATCAAACTT GAAGAAGTTTCTGAGGAGAAATTACTTGTTGAGAACAAGTTTAAGCAGCTGGAGGAAGCA AACTCTGAAGCTGAAAAGTACAACCAAGAACTGTCACATGCTACCGAGAAGCTTTCAGAG GAGAAGTTCAGACACGAGGCTGAGATTCTTGCATTGAATCAGGCCATTGAAAATCTGAAA TCCAAACTGGAGAGCATTGCTAAGGAGAAATCGTTGCTTAAATCATGGTTTGCTGACCTA GAGCAAGTCGTGGAGCGAGGAAGGAGAATTTTCCCCGAATAGCCGGAATTCCGTCAGAAA AAATCATAGCTTGCATTTAGCGAATTAGAACTTTTTTTTCTTCTTCTAATACACCATGAT ACACACTTGAGAAGTCCTACCATGCATCAGCATTGTACTTTTCCTGTCTGATTCTTTTCC TTGCTGAGGCGATGCATGGTGGTGATGTGCTGATTGCCTGCGAGTCTTTTGCGCGGAACG TATTTCCCTCGGCAATAAAATGGTTCTAAATCCATGTAACTTGTATATGAGC