Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0167750-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:3465634:3467560:-1 gene:Os01g0167750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0167750-00)
Sequence	ATGTCCCGCCCGCCCCCCTCCGCCGCCCGCGTGGCCCTCTACCTCCGCCGCGCCCGCCTC ATCGACTCGCTCCGCCTCCGCCTCCGCTCCCCTTCCTCCCCGCCGCCGCCACCGCCACCC GACGACCCCGTCGTCGCGCTCCACGCCATCCGCGCCGCCCCGACGCCGGCGTCGGCGATC TCCGTCTTCCGCGCCCTCCCGCCGCCCCAGCCGCTCCCACTCTTCCAGGCCCTCGCGTCC CGCCTCGCCGCCTTCGCCGCGCTCCCCGACCTCCGCTCCCACCTCGCCTCATTCCTCTTG CCCCCGCCGCCTCTCGCGCGCCTCCGCCTCCTCGCCGCCGCGGGCGACCACGCCTCCGCG CTCGACGCCTTCGCCTCCGTCCCGGCCAAGCCGCACCGCCCCGCCGAGGCGCACAACCTC CTCATGGGGCTCCACGTCCGCGCGGCCGACCATGCCGCCGCCGTGGGGGCCTTCCGCGCC ATGGTCCGCGAGGGCGCGCTCCCGAACGCCCGCACCTACACCGTCGTCATCGAGCACCTC GCCTCCGCGGGGTTCGTGGACCAGGCGGTCGAGGTGTTCCGCCTCCTCCCGTCGCTGCGC GCGCGGCGGACCACCCGGCAGTACAACGTGCTCGCCGAGGCGCTCGCGTCGGCGGGGAAG TTCGACCAGCTCCGGTGGCTCGTCCGCGAGATGGTCGCCGTCGACGGCGTCATGCCCGGT CCGCAAATGCGCGCCGCCATCGCCGCCATGAGGGAAGCGGGACACGCGGAGGGCACGGAG GATTTCGTCGAGGAGCTTTCACCCAACGAAAGAATCGGTTACGCCGTGGACGACGTCGAC GGCGAGGGAGATAGCGACGACGAGGAGGAGGAGGGCGACGACGACGATGGCGTGGACGGT CGTGACAAGGGCAGAGGCAGAGCGACACTGAAGCCATGGCTGGACCCGCGCGAGCTCGCG AGGGCGCTGGAAGGGTGGGAGCCGAGGGAGGTGGCCGAGCTGGAGGCCGCCGGGATCGTG TGGACGCCGCGGCTGGTGTGCAAGCTGCTGCGCGCGTTCAAGAAGGCGGAGACGGCGTGG GAGTTCTTCTGCTGGGTGGCGTGCCGCCCCGGCGGCTACGCGCACGACCGGCACACGGTG GCGAGGATGGTCGCCATCCTCGCCCGCGCCGGCCACGTCGAGCTGGTGGAACGCCTGCTG GGCAAGGTGCGGGCCGACGGCATCGTCCTCCCGTTCGCCACCGTGCGGCTGGTCGTCGAC TTCTACGGCCTCTCCAAGAAGGCCGACGCGGCGATCAGGGTGTTCCGGGAAGCCGACTCC ATCTGCGGCGCCGTGTCGAGGCCCAACCTGGCGCTCTTGTGCTCGTCGCTGCTGCGGACG CTGGCTAAATGCCGGAGAGCGGCGGACGCCATGGAGCTCCTCGAGGAGATGATGTCGCGC GGCGTCCTCCCCGACCTGCAGACGTTCTCCGGCCTGATGGAGCACCTCGCCGGCGCCGGC GAGCTCAAGGGCGTGCACCGGCTGCTCGGGCTGGTGCGGCAGTGCGAGCTGCAGCCCGAC GGGTACATGTACAGCGTGCTGATCAAGGTCTACTGCAAGAAGGAGCGCGCCGCGCTCGCG CTGAAGCTGTTCGACGAAATGCGTGGCGCCGGGGTCGCCCCCGACGCGCCCACCAAGGCG CTGCTGGTGAAGAGCCTGTGGAGGGAGGGGAAGCTCCGGGAGGCGGCGCAGGTGGAGGAG AGGTGCGAGGAGGCGGCCGGCGACGGCCTCCCGGAGGCGTCGCCGGGGCACGTGTGGACG GCGAGCGCCGCCGACCTGAAGAAGGTCTCCGACATCTACTACGGCTGCTTCACTCAGCCT GCAGCACAGACAGTCAGTACTCCATAG

Peptide Sequence

PEP ID	Os01t0167750-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:3465634:3467560:-1 gene:Os01g0167750 transcript:Os01t0167750-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0167750-00)
Sequence	MSRPPPSAARVALYLRRARLIDSLRLRLRSPSSPPPPPPPDDPVVALHAIRAAPTPASAI SVFRALPPPQPLPLFQALASRLAAFAALPDLRSHLASFLLPPPPLARLRLLAAAGDHASA LDAFASVPAKPHRPAEAHNLLMGLHVRAADHAAAVGAFRAMVREGALPNARTYTVVIEHL ASAGFVDQAVEVFRLLPSLRARRTTRQYNVLAEALASAGKFDQLRWLVREMVAVDGVMPG PQMRAAIAAMREAGHAEGTEDFVEELSPNERIGYAVDDVDGEGDSDDEEEEGDDDDGVDG RDKGRGRATLKPWLDPRELARALEGWEPREVAELEAAGIVWTPRLVCKLLRAFKKAETAW EFFCWVACRPGGYAHDRHTVARMVAILARAGHVELVERLLGKVRADGIVLPFATVRLVVD FYGLSKKADAAIRVFREADSICGAVSRPNLALLCSSLLRTLAKCRRAADAMELLEEMMSR GVLPDLQTFSGLMEHLAGAGELKGVHRLLGLVRQCELQPDGYMYSVLIKVYCKKERAALA LKLFDEMRGAGVAPDAPTKALLVKSLWREGKLREAAQVEERCEEAAGDGLPEASPGHVWT ASAADLKKVSDIYYGCFTQPAAQTVSTP

Transcript Sequence

Transcript ID	Os01t0167750-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3465634:3467560:-1 gene:Os01g0167750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0167750-00)
Sequence	CCGCCACGCTCTCTCGTCTGCCTGAACACGCTCGCCGGCGATGTCCCGCCCGCCCCCCTC CGCCGCCCGCGTGGCCCTCTACCTCCGCCGCGCCCGCCTCATCGACTCGCTCCGCCTCCG CCTCCGCTCCCCTTCCTCCCCGCCGCCGCCACCGCCACCCGACGACCCCGTCGTCGCGCT CCACGCCATCCGCGCCGCCCCGACGCCGGCGTCGGCGATCTCCGTCTTCCGCGCCCTCCC GCCGCCCCAGCCGCTCCCACTCTTCCAGGCCCTCGCGTCCCGCCTCGCCGCCTTCGCCGC GCTCCCCGACCTCCGCTCCCACCTCGCCTCATTCCTCTTGCCCCCGCCGCCTCTCGCGCG CCTCCGCCTCCTCGCCGCCGCGGGCGACCACGCCTCCGCGCTCGACGCCTTCGCCTCCGT CCCGGCCAAGCCGCACCGCCCCGCCGAGGCGCACAACCTCCTCATGGGGCTCCACGTCCG CGCGGCCGACCATGCCGCCGCCGTGGGGGCCTTCCGCGCCATGGTCCGCGAGGGCGCGCT CCCGAACGCCCGCACCTACACCGTCGTCATCGAGCACCTCGCCTCCGCGGGGTTCGTGGA CCAGGCGGTCGAGGTGTTCCGCCTCCTCCCGTCGCTGCGCGCGCGGCGGACCACCCGGCA GTACAACGTGCTCGCCGAGGCGCTCGCGTCGGCGGGGAAGTTCGACCAGCTCCGGTGGCT CGTCCGCGAGATGGTCGCCGTCGACGGCGTCATGCCCGGTCCGCAAATGCGCGCCGCCAT CGCCGCCATGAGGGAAGCGGGACACGCGGAGGGCACGGAGGATTTCGTCGAGGAGCTTTC ACCCAACGAAAGAATCGGTTACGCCGTGGACGACGTCGACGGCGAGGGAGATAGCGACGA CGAGGAGGAGGAGGGCGACGACGACGATGGCGTGGACGGTCGTGACAAGGGCAGAGGCAG AGCGACACTGAAGCCATGGCTGGACCCGCGCGAGCTCGCGAGGGCGCTGGAAGGGTGGGA GCCGAGGGAGGTGGCCGAGCTGGAGGCCGCCGGGATCGTGTGGACGCCGCGGCTGGTGTG CAAGCTGCTGCGCGCGTTCAAGAAGGCGGAGACGGCGTGGGAGTTCTTCTGCTGGGTGGC GTGCCGCCCCGGCGGCTACGCGCACGACCGGCACACGGTGGCGAGGATGGTCGCCATCCT CGCCCGCGCCGGCCACGTCGAGCTGGTGGAACGCCTGCTGGGCAAGGTGCGGGCCGACGG CATCGTCCTCCCGTTCGCCACCGTGCGGCTGGTCGTCGACTTCTACGGCCTCTCCAAGAA GGCCGACGCGGCGATCAGGGTGTTCCGGGAAGCCGACTCCATCTGCGGCGCCGTGTCGAG GCCCAACCTGGCGCTCTTGTGCTCGTCGCTGCTGCGGACGCTGGCTAAATGCCGGAGAGC GGCGGACGCCATGGAGCTCCTCGAGGAGATGATGTCGCGCGGCGTCCTCCCCGACCTGCA GACGTTCTCCGGCCTGATGGAGCACCTCGCCGGCGCCGGCGAGCTCAAGGGCGTGCACCG GCTGCTCGGGCTGGTGCGGCAGTGCGAGCTGCAGCCCGACGGGTACATGTACAGCGTGCT GATCAAGGTCTACTGCAAGAAGGAGCGCGCCGCGCTCGCGCTGAAGCTGTTCGACGAAAT GCGTGGCGCCGGGGTCGCCCCCGACGCGCCCACCAAGGCGCTGCTGGTGAAGAGCCTGTG GAGGGAGGGGAAGCTCCGGGAGGCGGCGCAGGTGGAGGAGAGGTGCGAGGAGGCGGCCGG CGACGGCCTCCCGGAGGCGTCGCCGGGGCACGTGTGGACGGCGAGCGCCGCCGACCTGAA GAAGGTCTCCGACATCTACTACGGCTGCTTCACTCAGCCTGCAGCACAGACAGTCAGTAC TCCATAG