Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0166800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3425794:3429573:-1 gene:Os01g0166800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ETG1 (E2F TARGET GENE 1). (Os01t0166800-01)
Sequence	ATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGGCGGTGCGCTCCACCTTC GAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGGCGTTCCGGGGGAAAGAC TGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAGGCGGGCTTGACAAGGTT CCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATACCCTTGTTCGGTTCCGG GGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTGCTTTCAAGGATGGCTCC ACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAATGCCACACCCTTGTGAT TCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGCCTGGACAAAATTCTTGG ACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAAGCTGCTTCACATCTGAA CAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGGATGTTTCAGAAAGTGGT AGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATGGTGTCAAGATCTCAAAT AGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAGAGATGAATGGGGGAGAT CATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGTATGATATGCCTGAAAGT CAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATACATTTGACCCTGAACTT GCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTATGGAAGATGTAACCGCT CAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTATGGAGAAACTTATCTGCT CATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAATCCTGCTAAGGGGAATT CGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAGATGAACTGGCAGCTCAA TGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGGATGTGGTTACCGTTGGT AGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTTCTATATTTGGAAACCAG CTAAATAATTTGTTCCAGAGGCTACTACCATATTCACAAGTTATTCCTCTGTCAATTGAG TATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAATCAGGAAGATTGGTTACA GGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATGAGACTCTCTTGCAGTCT GGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTAAGAACTTGATGGAGTCA CAGAAGGTTGAGTATGATTTTGAGTTCTACAAGTTGGAAATGGCAACTGATGTGCAGCTA CTAATTCTCTCCGAGGGAAAATCAAATATCCTACCTTCTGACTTGATAGTACCTTTCCGC CCATCATCTGTTCCTGCGGTAAATGCAAGCTCCGAGGAACTTGAAAGTTGGAGATGGTAT TTGGCCACAGTTAGGTCTCTTCCTCAGTCAACTGAAACTGATACATACCAGATGATTCAA GATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTTGTTCTGAACTTAGCAGA TGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGAAGAGTCTCTCCATGGAG CACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGAGGCTACAATGA

Peptide Sequence

PEP ID	Os01t0166800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3425794:3429573:-1 gene:Os01g0166800 transcript:Os01t0166800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ETG1 (E2F TARGET GENE 1). (Os01t0166800-01)
Sequence	MVGPQYDLVGNPLGAVRSTFERAAAESGGHEPVAAFRGKDWGATEVFRSFLFEQGGLDKV PVLDESNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFKDGSTWRTNKFSDSSPFSMPHPCD SHLWERHLFHCVPVPGQNSWTRESSPGPDLRRIASCFTSEQREKRKRGADNDAMDVSESG SGETSSSSKKTKDDGVKISNSSVEMSMNEEHHVPEMNGGDHHIPGSSFSCLVKVYDMPES QVKLNDVSEFIGVYTFDPELAAPNDNSDDIMFDLMEDVTAQLPPSKVPRLHCLVWRNLSA HDFLPRPPAVEPSPILLRGIRQSLLSHLTLVLGKDELAAQCLLLHLLSRLRNKVDVVTVG RLSLNFTGFNRESVSIFGNQLNNLFQRLLPYSQVIPLSIEYLNTATLQPRKDNQSGRLVT GVLQLPQGTHLTFDETLLQSGSLTSKGVENTMLLKNLMESQKVEYDFEFYKLEMATDVQL LILSEGKSNILPSDLIVPFRPSSVPAVNASSEELESWRWYLATVRSLPQSTETDTYQMIQ DEMVNAMRDDRSLGCSELSRWLTMAQIMAASFGEKSLSMEHWQMVKELERLRKERLQ

Transcript Sequence

Transcript ID	Os01t0166800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3425794:3429573:-1 gene:Os01g0166800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ETG1 (E2F TARGET GENE 1). (Os01t0166800-01)
Sequence	ACCACTTCTCCCGCCATTGCTCCGCTCCCCAATCTCCCCAACGAGAGAGAGAGAGAGCGA GGAGAGGGAGAGGGAGGATGGTGGGGCCGCAGTACGACCTCGTCGGGAACCCCCTGGGGG CGGTGCGCTCCACCTTCGAGAGGGCGGCGGCGGAGTCCGGTGGGCACGAGCCGGTGGCGG CGTTCCGGGGGAAAGACTGGGGCGCCACCGAGGTGTTCCGCTCCTTTCTCTTCGAGCAAG GCGGGCTTGACAAGGTTCCGGTGTTGGATGAATCAAATCTTGGATTGATCAAGCCGAATA CCCTTGTTCGGTTCCGGGGGATGGTTCAGGACATGCTCGGGAACGAGTTCTATGTTGGTG CTTTCAAGGATGGCTCCACTTGGAGGACAAACAAATTCTCCGATTCCTCGCCGTTCTCAA TGCCACACCCTTGTGATTCACATCTCTGGGAGCGCCATCTTTTCCACTGTGTGCCTGTGC CTGGACAAAATTCTTGGACACGCGAGTCGTCCCCTGGCCCTGACTTGCGCAGAATAGCAA GCTGCTTCACATCTGAACAAAGGGAGAAAAGGAAGAGGGGTGCAGATAATGACGCCATGG ATGTTTCAGAAAGTGGTAGTGGAGAGACTTCTTCATCCAGCAAGAAGACGAAGGATGATG GTGTCAAGATCTCAAATAGTTCAGTAGAAATGTCAATGAATGAAGAACATCATGTCCCAG AGATGAATGGGGGAGATCATCATATTCCTGGAAGCTCCTTTTCCTGCCTAGTGAAGGTGT ATGATATGCCTGAAAGTCAGGTGAAACTGAACGATGTTTCTGAGTTCATAGGTGTATATA CATTTGACCCTGAACTTGCTGCTCCTAACGATAATTCGGATGATATAATGTTTGACCTTA TGGAAGATGTAACCGCTCAGCTGCCTCCCAGTAAGGTTCCCCGTCTTCACTGCTTGGTAT GGAGAAACTTATCTGCTCATGATTTTCTACCAAGGCCTCCTGCGGTTGAGCCATCACCAA TCCTGCTAAGGGGAATTCGGCAATCTTTGCTCTCACATCTTACTCTGGTATTAGGGAAAG ATGAACTGGCAGCTCAATGTTTACTGTTGCATCTTCTATCCAGACTTCGTAATAAGGTGG ATGTGGTTACCGTTGGTAGGCTCTCCTTGAATTTCACTGGCTTTAACAGAGAGAGTGTTT CTATATTTGGAAACCAGCTAAATAATTTGTTCCAGAGGCTACTACCATATTCACAAGTTA TTCCTCTGTCAATTGAGTATCTCAACACAGCCACACTTCAGCCTAGAAAGGACAACCAAT CAGGAAGATTGGTTACAGGAGTTTTACAGTTACCTCAGGGTACTCACCTGACCTTTGATG AGACTCTCTTGCAGTCTGGATCATTGACATCCAAAGGTGTCGAGAATACTATGCTGCTTA AGAACTTGATGGAGTCACAGAAGGTTGAGTATGATTTTGAGTTCTACAAGTTGGAAATGG CAACTGATGTGCAGCTACTAATTCTCTCCGAGGGAAAATCAAATATCCTACCTTCTGACT TGATAGTACCTTTCCGCCCATCATCTGTTCCTGCGGTAAATGCAAGCTCCGAGGAACTTG AAAGTTGGAGATGGTATTTGGCCACAGTTAGGTCTCTTCCTCAGTCAACTGAAACTGATA CATACCAGATGATTCAAGATGAAATGGTCAATGCCATGCGTGATGATAGGAGCTTGGGTT GTTCTGAACTTAGCAGATGGCTAACGATGGCACAGATAATGGCTGCAAGCTTTGGTGAGA AGAGTCTCTCCATGGAGCACTGGCAGATGGTGAAGGAGCTGGAGAGGCTCAGGAAGGAGA GGCTACAATGAGATGAGATCACAGTAAAATGTGCTTGTAAAATCCACTTGTGGCCGTGGC CCAATGTTATGTGTATACCACTAGGGTCTAAAATCTAAATCAAGATGTGGATCTGCAACA TCTTCTGTGATCCTATGGAAGTATCAATGCCATTTGATAAGTTATCTG