Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0166500-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:3414866:3415943:-1 gene:Os01g0166500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0166500-02)
Sequence

ATGGCGGCGGCCAAGAAGGAGAAGGAGGAGGAGGAGGAGGCGTCTAAGCTCCAGCTGAAG
CCGGCGGGGAGCAAGGTGTTCTCCAAGCTGCTGTCCAGGGAGAGCGCCGCCGCGGCGCCG
TCGTTCAGGGTGTACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCG
CAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCGCTCACGCCGCCG
CCGTCCTACTACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGG
AAGTATGGGAAGCACGGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGA
GGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCG
TCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCG
ACGTGCTCGTCGATGAGGAGCCTGCAGGGGCACGGCGGCGGCGGCCGCGCGTTCGGGGAC
GACGACGACGATGACGACGACGGCGGCGACGACGACATGGCGGCGTCGACGGCGTGCTTC
AGGGTGCGGCACGAGAGCTTCAGGGCCATCAAGAACTGCCGCGTCGCCATGACGGTGAGG
AGCGCCATCTCGTCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCACGGCTCTAGCGCCGCC
GTGGCGCAGAAGGCGGCGTAG

Peptide Sequence

PEP ID

Os01t0166500-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:3414866:3415943:-1 gene:Os01g0166500 transcript:Os01t0166500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0166500-02)
Sequence

MAAAKKEKEEEEEASKLQLKPAGSKVFSKLLSRESAAAAPSFRVYYGVASAGSVPFLWES
QPGTPKNAMSDAVLPPLTPPPSYYTAGKVSAGGGGGGGGRKYGKHGILRLFVLPKIRLRR
GGRPVSGSPTSSCASSTSSSSSSASFYSSYSLSFRSTQSPTCSSMRSLQGHGGGGRAFGD
DDDDDDDGGDDDMAASTACFRVRHESFRAIKNCRVAMTVRSAISSVAAGAGAGGHGSSAA
VAQKAA

Transcript Sequence

Transcript ID

Os01t0166500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3414866:3415943:-1 gene:Os01g0166500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0166500-02)
Sequence

GTCTTCCTCCTCACTCTCTCCAGCTTCCCTCTCCTCGAGCTCGAGATCTCTTCCTCCTCC
TCGATCGCGTCCATCCATGGCGGCGGCCAAGAAGGAGAAGGAGGAGGAGGAGGAGGCGTC
TAAGCTCCAGCTGAAGCCGGCGGGGAGCAAGGTGTTCTCCAAGCTGCTGTCCAGGGAGAG
CGCCGCCGCGGCGCCGTCGTTCAGGGTGTACTACGGCGTCGCCTCCGCGGGCTCCGTGCC
CTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCC
GCCGCTCACGCCGCCGCCGTCCTACTACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGG
CGGCGGAGGAGGAAGGAAGTATGGGAAGCACGGCATCCTCAGGTTGTTCGTGCTGCCCAA
GATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTC
CTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAG
GAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGCACGGCGGCGGCGG
CCGCGCGTTCGGGGACGACGACGACGATGACGACGACGGCGGCGACGACGACATGGCGGC
GTCGACGGCGTGCTTCAGGGTGCGGCACGAGAGCTTCAGGGCCATCAAGAACTGCCGCGT
CGCCATGACGGTGAGGAGCGCCATCTCGTCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCA
CGGCTCTAGCGCCGCCGTGGCGCAGAAGGCGGCGTAGCCTCTCCTCTTCTTGCCTCGTAG
TTCACGCTGTCTGTCACTGTTACTCGGCTGCTGTTTCAACTTGGGGTGTAATTTGCAGGT
TTTAACAGTGTTCTATTTACCATATGCATATATATGTGGCTTTTTCATGGAGTGATATTT
ATGGAAGAGTTTAATTACTATCACCAAAGTGTTATATGCTTAATTAATTAAGCTTGTATG
AAGTATATATGGAGAATAATATATGAGCATGCATGGGTGTGCTAGAATGGTAGAATCT