Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0166400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3405466:3408694:1 gene:Os01g0166400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositolglycan-related. (Os01t0166400-01);Hypothetical conserved gene. (Os01t0166400-02)
Sequence

ATGCAAAGTTTTTCAGGAATACAGGCATTGCAGAGACACTTCCCATGTTTCTTAGATTTT
ATATATGCTGCAGCACGTAGATTTATTTTCTTTTATCTTCTCTTCATCAAAGCTACCTTT
TATAGTGGAAGAGTTCATCGTCAATTTGTGCCCGTTGGCAAGCTCCTAAAGCCAGTGTTG
AATGAGCATGTGACCCCTATTACATGTTACTGGAGCTTAGTGTTGCTTCTACACAGCGAA
GACAAACTCGTGCGTGTTTTTAAGAAGGTGTATCCACCAGTCAAAATGATGGTTCCGATA
TGGAAAGCTTTGGATGCATTCACAAATTATGGTGGCATGGGCAATTCTGTAGCTCTTCAA
CCAAACCCTCTGCTTATAAATGTTGAACAAGGATGTACAGCGACATGA

Peptide Sequence

PEP ID

Os01t0166400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3405466:3408694:1 gene:Os01g0166400 transcript:Os01t0166400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositolglycan-related. (Os01t0166400-01);Hypothetical conserved gene. (Os01t0166400-02)
Sequence

MQSFSGIQALQRHFPCFLDFIYAAARRFIFFYLLFIKATFYSGRVHRQFVPVGKLLKPVL
NEHVTPITCYWSLVLLLHSEDKLVRVFKKVYPPVKMMVPIWKALDAFTNYGGMGNSVALQ
PNPLLINVEQGCTAT

Transcript Sequence

Transcript ID

Os01t0166400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3405466:3408694:1 gene:Os01g0166400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to phosphatidylinositolglycan-related. (Os01t0166400-01);Hypothetical conserved gene. (Os01t0166400-02)
Sequence

AGGTTACCCGTTCAGCCGTCCTCCTCCTCCTCCGCCGCCGCCGTCGCCGGCGGCGGGTCT
GCGTTTACTCCTCCAAACCCGTCTCGCGTTTCATTCGCAGCAGTTAGGAGATCATGGGAT
TCACTAGACATTTGGGCGGATGTGTTGTTCTTGTTAGGTTCGTTCAAGGATTGAAAGCTT
CTGAAATGAACGCCATTGGTTGGGACTTCGAGTGTTTTGATGTTCTGAAAGCCTGAAACC
ATGAAGAATCGAGCAGTAGAGATGTCGAGTGGCGTGTACACGTATAAACATCACTGCGAG
GGAGGATTCGATATCCATGAAATCTACATCAAGAGGAGCAAATTCAGGGTGCTGTTCTCT
TATGTCGGCGAAATTTTCCTCTTTGCGAATGTACTGCATGCCTTGCTGTTAAAGGTCGTT
GTTCTCTCGGATGATAATCCCAAGTGGTAGCTGAGTCTTCACTATTTCAGTGACCTACTG
CATTCTCCCAAAAAATTTATTTGCTGATTGCTGAATGCCAACATTTTTCATGATGTGAAT
AGATATGTGAGGTTCTTCAAAAACAAGCTTATCATACATGCCTTGTCAGTGATACTCACA
TGATGTTGATTTTGTTTGGGTACTTAAGATTCAGAAAGAGAAGAAAGGTGTCACCATACG
CTTGTGACTTTAATGAGTTTCTGACTTTCTGTGCTCAAATGTTTCAGGAGAGTCTATGCA
TCAATTCTTTTTGGAGTATTTCATTTGCTTTTGCCGTTGCAAAATGCTTAAAATATAAGC
CTGTGAAGAAAGAGTCATTGTTGATCATGCCAACCTTTGGTGTTCAGCTAGAACAACACT
TTTGGAGGTATGAAGATCCAATTTGGATTTTTACAGGGGTGCAATAAGTTCCACTCTTAC
TTATTCAAATTTTAGTGACACCCCAAGGGGACTTTGGCAATTGCAAATAGATAGGGGTAT
CATGGTAGTGGAAGTGAAGTCTTCAAAATTTAAATAACTACAAATACTTCTCTCTTTTTT
GAGAGAAAATGTACTGAACATGCAAAGTTTTTCAGGAATACAGGCATTGCAGAGACACTT
CCCATGTTTCTTAGATTTTATATATGCTGCAGCACGTAGATTTATTTTCTTTTATCTTCT
CTTCATCAAAGCTACCTTTTATAGTGGAAGAGTTCATCGTCAATTTGTGCCCGTTGGCAA
GCTCCTAAAGCCAGTGTTGAATGAGCATGTGACCCCTATTACATGTTACTGGAGCTTAGT
GTTGCTTCTACACAGCGAAGACAAACTCGTGCGTGTTTTTAAGAAGGTGTATCCACCAGT
CAAAATGATGGTTCCGATATGGAAAGCTTTGGATGCATTCACAAATTATGGTGGCATGGG
CAATTCTGTAGCTCTTCAACCAAACCCTCTGCTTATAAATGTTGAACAAGGATGTACAGC
GACATGAAGCCGTGATTCACTGAAGACTTTGGCTGACAGAAGAATGTAAACTAAATTTGC
TATGGACAAACGAAAATAAACTATAAAATGAGAAAATGTTAGTGATGGAGAGCTGTAATT
TTTCACTGGAGGAAGTATTTTATTTCTTCTCTGTTTTTTAGCTGCAGAAATTTACCAGCC
CATTTACCACCTTGGCCATGTGTATTTCTGACCCTCTGAAGATTCGCAGTAGAATGTCCT
GTACCGGTTTCCAGTTCTTGCATAGGAGTTCATCTTCTGCACATTGTAAACTCATTGCAG
TGTACTTTTGCTGGTACTACTAAAAAGCTTACCACTTGGATGAAACCAGATCTGTTCTTC
TGATTATATTTTTCCTCGAGCTAGATGTGAACTTATAATAGGAGTCATCCTCCCTGCTGC
AGAAGTTGACAAGCCACACGGTTGCACTGCTGCAATAACTTCAGAATGTGTATTTCAGTG
GATCTGAAGATCTAGACATGGAGACCTGTTCTTGGCAGTGTTACCAAAGAAGAACTGTCA
CCAGGTCATCATCATGCCAGCCATATACCATCATCAACACCATGAAACTTCTCATTATCA
CAACTGTACATGACAAATTGCCAGATCCTGCATCCCCACCTCATGAAGACTACAAAACTT
CCATCACATTCTTGGTCAGACTAAACAGCCATGCTTCACCGAGTGTATCAGAACGGTGAA
GGGCCCACATGTCAGTGACCCTGTTCGCGGACGAAAAATCCGTATGAGCGTTTGCTAGGG
GGATGTTTGCTCACCGACAACTGGAACCCGACACAAGAACCCGGGTCACTGTCGTTGTGA
GCTCTGAATTGGAGGGCATGATGAGTGTGCAAGAGGATGACAAGGACAAAGTGTAATGAT
ACATAGCAATCCTACCAGTGAAGAAAAACTGACAAGGATAAGGCATGTTTCCAAATTACA
TTCCAATATGTGTGGCTAGCTTAGGTCAATTTTTACCTTTTTTTGGTTTTTGTTCTTCCC
ACTGTGGGCACTGTTCCTGAGTGCTCCCTTTCCTGTACATCCTTTCTGGTCTGATTTAGC
AATGTGGCTGTTTCATGTGTATGATATTTTCGGGAATATTTTTGTTTTCGGGAATATCAT
GTGTATGGTATTGACACTGTGAAATAAAAGTATTTCTTCAGATTTATCC