Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0165100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:3358534:3360674:-1 gene:Os01g0165100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0165100-02)
Sequence	ATGGCTCACAGCTTACCTCTTGATGTATGGGGTTGGATCACCAACCTGCCTCCGTTCTCC CAATGGCGCTCCAACGCCATGTCCCTTTGCATCTGCCCCACACCATCAGCATCAGAATCA TCACAGCCATCGGTGAACCTATCAGTTGTCAAAACCCCTCCCACCCAGCCCTCCTTTGTC ACCTTCTCCATCTTTGCAAATTACCGTGTGCCAATTTCTCTGTGGACGTCAAAACCAGTC CACCTGAAATCATACACCCAGCAGTCTCTAGACGAACAAGAGATGTTAGAGTTGTTTGTT GACATTGTGGACTGGGTGCTGAGATCCGGACCAAACAAAAAGCTGTCCTTTCAGTTTCCC AGGGCACAGATTCATGGCAATCTAAAGGACGTGTTTAACATAGTTTTCTTGTCCCTGGCC TTCCTAGTTTGCATCTATGAGGCTCCCCATGCTCTTCGCTGTCGATGCCTCGAATCCCTG AGGACTCAGCTGACTGGGCCAAAGTGCAAAGATGCTGCAAAGACCTTTGTCAGAATGTTG GGAGCAAACCTTGAGGAGCAATGGATGCAGACAATGAATCTTGCAGTGACTAACTGGATT GTTGAGCAACGATCCTCACACCATTCATTTGGGGTGCCATCGCCACTGTTCTCATATGCT CTTTCAGCAAGTGGGCTCTGGAAGGTCCAGCTATACTGCCCACTCATTGCCATGAGCATG GAAGATCCTGCAGTGCCAACACAGGATGAGCGCCTTCTCTTCTCGCTTACTTATCAGCAA CTTGAAGGTGTGATTCAGCTCGCCTACAAAACAATCAGAAGGGACAACTGGATTGATGTC GAGATAAAGGTGGACAACATAAGGTGTGATGTGGACTCTTTGGTCTCCGAGATCCTCATG ACTGAACGTGGACATGGCTCTGAGGAGAAGCACTTTCCATCACGTGTTATGCTGCAAATC ACACCTATGCAACAATCAGATGTCCTGTCGGTTTCAGTCAGCAAGTCCTCCGACAACCCC ACGCATGAGTTTGGCCTTGAGAAGGGCATTGAAGGTTCATTCGACCCCCCAAACACATTT GGACTAAAGGCATCGGTCAGCGAAAGCCTCACACTGACCATGAAACCCTGGAAATTTGAA CAGTCTGTGCATGGAAACACTACAACCTTGAACTGGTTTCTCCATGATGGTGTAAACGGA AGGGAGGTTTATTCTTCAAAGCCTTCCAAGCTCTCCCTGCTTCAGCCACGGGCCTGGTTT CGTGACAGGTACTCGACCGTGTATCGCCCATTCACGAAGAAGGGTGGTGTCATTTTCGCA CGTGATGAATATGGAGACAGCGTCTGGTGGAAGATCTGTGGTGCAGCATTAGGGAAGACC ATGGACTGGGAGATTAGAGGCTGGATTTGGCTGACCTACTGGCCTAACAAACAGAAGACC TTTCACAGTGAAACAAGGAGGCTTGAATTCAGAGAATGTCTGCAACTTCCCCTTATGAAA TCTCCATGA

Peptide Sequence

PEP ID	Os01t0165100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:3358534:3360674:-1 gene:Os01g0165100 transcript:Os01t0165100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0165100-02)
Sequence	MAHSLPLDVWGWITNLPPFSQWRSNAMSLCICPTPSASESSQPSVNLSVVKTPPTQPSFV TFSIFANYRVPISLWTSKPVHLKSYTQQSLDEQEMLELFVDIVDWVLRSGPNKKLSFQFP RAQIHGNLKDVFNIVFLSLAFLVCIYEAPHALRCRCLESLRTQLTGPKCKDAAKTFVRML GANLEEQWMQTMNLAVTNWIVEQRSSHHSFGVPSPLFSYALSASGLWKVQLYCPLIAMSM EDPAVPTQDERLLFSLTYQQLEGVIQLAYKTIRRDNWIDVEIKVDNIRCDVDSLVSEILM TERGHGSEEKHFPSRVMLQITPMQQSDVLSVSVSKSSDNPTHEFGLEKGIEGSFDPPNTF GLKASVSESLTLTMKPWKFEQSVHGNTTTLNWFLHDGVNGREVYSSKPSKLSLLQPRAWF RDRYSTVYRPFTKKGGVIFARDEYGDSVWWKICGAALGKTMDWEIRGWIWLTYWPNKQKT FHSETRRLEFRECLQLPLMKSP

Transcript Sequence

Transcript ID	Os01t0165100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3358534:3360674:-1 gene:Os01g0165100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0165100-02)
Sequence	ATTGCAAAACAAGCTCAAGTTTTCAACAACGTAATGGCTCACAGCTTACCTCTTGATGTA TGGGGTTGGATCACCAACCTGCCTCCGTTCTCCCAATGGCGCTCCAACGCCATGTCCCTT TGCATCTGCCCCACACCATCAGCATCAGAATCATCACAGCCATCGGTGAACCTATCAGTT GTCAAAACCCCTCCCACCCAGCCCTCCTTTGTCACCTTCTCCATCTTTGCAAATTACCGT GTGCCAATTTCTCTGTGGACGTCAAAACCAGTCCACCTGAAATCATACACCCAGCAGTCT CTAGACGAACAAGAGATGTTAGAGTTGTTTGTTGACATTGTGGACTGGGTGCTGAGATCC GGACCAAACAAAAAGCTGTCCTTTCAGTTTCCCAGGGCACAGATTCATGGCAATCTAAAG GACGTGTTTAACATAGTTTTCTTGTCCCTGGCCTTCCTAGTTTGCATCTATGAGGCTCCC CATGCTCTTCGCTGTCGATGCCTCGAATCCCTGAGGACTCAGCTGACTGGGCCAAAGTGC AAAGATGCTGCAAAGACCTTTGTCAGAATGTTGGGAGCAAACCTTGAGGAGCAATGGATG CAGACAATGAATCTTGCAGTGACTAACTGGATTGTTGAGCAACGATCCTCACACCATTCA TTTGGGGTGCCATCGCCACTGTTCTCATATGCTCTTTCAGCAAGTGGGCTCTGGAAGGTC CAGCTATACTGCCCACTCATTGCCATGAGCATGGAAGATCCTGCAGTGCCAACACAGGAT GAGCGCCTTCTCTTCTCGCTTACTTATCAGCAACTTGAAGGTGTGATTCAGCTCGCCTAC AAAACAATCAGAAGGGACAACTGGATTGATGTCGAGATAAAGGTGGACAACATAAGGTGT GATGTGGACTCTTTGGTCTCCGAGATCCTCATGACTGAACGTGGACATGGCTCTGAGGAG AAGCACTTTCCATCACGTGTTATGCTGCAAATCACACCTATGCAACAATCAGATGTCCTG TCGGTTTCAGTCAGCAAGTCCTCCGACAACCCCACGCATGAGTTTGGCCTTGAGAAGGGC ATTGAAGGTTCATTCGACCCCCCAAACACATTTGGACTAAAGGCATCGGTCAGCGAAAGC CTCACACTGACCATGAAACCCTGGAAATTTGAACAGTCTGTGCATGGAAACACTACAACC TTGAACTGGTTTCTCCATGATGGTGTAAACGGAAGGGAGGTTTATTCTTCAAAGCCTTCC AAGCTCTCCCTGCTTCAGCCACGGGCCTGGTTTCGTGACAGGTACTCGACCGTGTATCGC CCATTCACGAAGAAGGGTGGTGTCATTTTCGCACGTGATGAATATGGAGACAGCGTCTGG TGGAAGATCTGTGGTGCAGCATTAGGGAAGACCATGGACTGGGAGATTAGAGGCTGGATT TGGCTGACCTACTGGCCTAACAAACAGAAGACCTTTCACAGTGAAACAAGGAGGCTTGAA TTCAGAGAATGTCTGCAACTTCCCCTTATGAAATCTCCATGATGTATCTTTTGGTACTTT GAATGACCATAGAGCGCTATAATGCGATAGTAGTATGTTTAAGTATTTAAAATTCCATAT GCATGCAAATTTGTACTATCATAGTTTGTCATACTTTTATGCATGCAGAAATAAACTTCC TAATATACCTGTTTG