Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0164500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3328572:3331963:-1 gene:Os01g0164500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 115, BRI1-interacting protein 115, brassinosteroid receptor kinase-interacting protein 115, RNA helicase 18 description:Similar to ATP-dependent RNA helicase-like protein. (Os01t0164500-01)
Sequence	ATGTCGTCTTCCTCCTCCTCGTTGGCGGCGGCGGCGGCGCGGAAGCGCGCGCTGACGGAG CAGAGGTTCTCGGAGCTGTCGCCCGCGCTGTCCCCGGAGGTGGTGAAGGCCCTGAAGGGC GGCGGGTTCCGGCGGTGCACGCCGGTGCAGGCGGCGGCCATCCCGCTGCTGCTTTCGCAC AAGGACGTGGCCGTCGACGCCGCCACCGGCTCCGGCAAGACGCTCGCCTTCGTCGTCCCC GTCGTCGAGATCCTCCGCCGCCGCCCCTCGCCTCCCAAGCCCCACGAGGTTCTTGGAATC ATCATCTCCCCGACGAGAGAGCTGTCTTCGCAGATATACAATGTGGCTCAGCCCTTCTTC GCGACGCTGAAGGGCGTCTCATCCATGCTACTGGTTGGTGGGTTCGACATCAAGGCGGAG CTAAAGAAACTGGAAGAAGAGGGTGCAAACATACTGGTCGGCACCCCGGGGAAGCTGTTC GACGTAATGGAGCGCTTAGACACTCTGAACTACAAGAATCTTGAGATTTTGATCCTGGAT GAAGCTGATAGGCTGTTGGATTTAGGATTCCAGAAGCAGATTACGTCGATTATTTCGAAG TTGCCAAAGCTGAGGAGAACAGGGCTTTTTTCGGCAACTCAGACGGAGGCTGTTAAGGAG CTGGCGAAAGCAGGGTTGAGGAATCCTGTGAGGGTTGAAGTTAAGACAGAGGTGAAGCCC ACAGGTAAAGATGGTGCTCAACAAGAGCTTGGTCCATCCAAAACACCGTTGGGTCTTCGA TTGGAGTATATGATATGTGAAGCATCAAATAAGTCATCGCAACTTGTTGATTTCCTTGTG CAGAACAATGGAAAGAAAATAATGGTGTACTTCGCAACATGTGCTTGTGTAGATTACTGG GCTATTGTTCTCCCGCTGTTGGACTCACTTAAAGGTTCTCCAATAATTCCTTATCATGGG AAGATGAAGCAGGGCCCTCGTGAGAAAGCTTTGGCATCATTTTCAGCTCTCTCAAGTGGT ATTCTAGTTTGCACTGATGTTGCAGCAAGGGGTCTTGACATACCACATGTTGATCTGATT GTGCAGTATGATCCACCTCAAGATCCCAATGTGTTCATACATAGAGCTGGCCGTACTGCA CGTTATGATCAAGAAGGAGATGCTATTGTATTCCTCTTACCGAAGGAAGATACTTATGTT GAGTTCTTGAAGAGGAGAGGTGTACCCCTCACTGAAAGGGAGTGTTCCACAAATGCTGTA GATATTGTACCACAGATCAGAAGTGCTGCATTGGAAGACCGAAATGTCATGGAGAAAGGG CTTACAGCTTTTGTTTCGTTTGTTCGGGCATACAAGGAGCACCACTGTTCTTACATTTTC AGTTGGAAAGACCTTGAAATTGGAAGGTTGGGTATGGAGTACGGCTTACTCCAAATTCCA TCTATGCCAGAAGTTAAGCACCATTCTCTTTCATTGGAAGGGTTTACTCCTGTTAAAGAT GTCGATGTTACAAAAATCAAGTACAAGGATAAAGCTCGAGAAAAACAACGGCAGAAGACA TTGAAAAGGAAAGCAGAAGAACTAGCTCTAAGGCCAGAGATAGAGAAGAGGAGGAAAGCC CCGGAGAAGCCTGAAAAGCCAAAGCGGAAGAAGACAGGTAAACAGCGTCAAGCAGTCCAA ACCAAGGAGGACATGGATGAGCTCGCGAATGAGTACCGGCTCCTGAAGAAGCTGAAGCGG GGGGTGATCGACGAGGACGAGTACGAGAAGCTCACCGGATTCGGGGAATCTGACGATGAC GATTCCTCGGATGGCGGCGATTCTGACCTGGACGAGAGAAAGGAGAGGGGCAACAAGGTG CTCAAGAAAATCAAGCAGAAAGGGAAGGCAAAAGGGTCTAGGAGATTTGAAGGGAGGAGC AAACAGAAGACTAGGAGAAGATGA

Peptide Sequence

PEP ID	Os01t0164500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3328572:3331963:-1 gene:Os01g0164500 transcript:Os01t0164500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 115, BRI1-interacting protein 115, brassinosteroid receptor kinase-interacting protein 115, RNA helicase 18 description:Similar to ATP-dependent RNA helicase-like protein. (Os01t0164500-01)
Sequence	MSSSSSSLAAAAARKRALTEQRFSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSH KDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPFF ATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILILD EADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKELAKAGLRNPVRVEVKTEVKP TGKDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVDFLVQNNGKKIMVYFATCACVDYW AIVLPLLDSLKGSPIIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLI VQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAV DIVPQIRSAALEDRNVMEKGLTAFVSFVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQIP SMPEVKHHSLSLEGFTPVKDVDVTKIKYKDKAREKQRQKTLKRKAEELALRPEIEKRRKA PEKPEKPKRKKTGKQRQAVQTKEDMDELANEYRLLKKLKRGVIDEDEYEKLTGFGESDDD DSSDGGDSDLDERKERGNKVLKKIKQKGKAKGSRRFEGRSKQKTRRR

Transcript Sequence

Transcript ID	Os01t0164500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3328572:3331963:-1 gene:Os01g0164500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:brassinosteroid receptor kinase (BRI1)-interacting protein 115, BRI1-interacting protein 115, brassinosteroid receptor kinase-interacting protein 115, RNA helicase 18 description:Similar to ATP-dependent RNA helicase-like protein. (Os01t0164500-01)
Sequence	AAGCGGCGCGACGCGAGTAGCAGACGCGGCGGCGCGACGCCATGTCGTCTTCCTCCTCCT CGTTGGCGGCGGCGGCGGCGCGGAAGCGCGCGCTGACGGAGCAGAGGTTCTCGGAGCTGT CGCCCGCGCTGTCCCCGGAGGTGGTGAAGGCCCTGAAGGGCGGCGGGTTCCGGCGGTGCA CGCCGGTGCAGGCGGCGGCCATCCCGCTGCTGCTTTCGCACAAGGACGTGGCCGTCGACG CCGCCACCGGCTCCGGCAAGACGCTCGCCTTCGTCGTCCCCGTCGTCGAGATCCTCCGCC GCCGCCCCTCGCCTCCCAAGCCCCACGAGGTTCTTGGAATCATCATCTCCCCGACGAGAG AGCTGTCTTCGCAGATATACAATGTGGCTCAGCCCTTCTTCGCGACGCTGAAGGGCGTCT CATCCATGCTACTGGTTGGTGGGTTCGACATCAAGGCGGAGCTAAAGAAACTGGAAGAAG AGGGTGCAAACATACTGGTCGGCACCCCGGGGAAGCTGTTCGACGTAATGGAGCGCTTAG ACACTCTGAACTACAAGAATCTTGAGATTTTGATCCTGGATGAAGCTGATAGGCTGTTGG ATTTAGGATTCCAGAAGCAGATTACGTCGATTATTTCGAAGTTGCCAAAGCTGAGGAGAA CAGGGCTTTTTTCGGCAACTCAGACGGAGGCTGTTAAGGAGCTGGCGAAAGCAGGGTTGA GGAATCCTGTGAGGGTTGAAGTTAAGACAGAGGTGAAGCCCACAGGTAAAGATGGTGCTC AACAAGAGCTTGGTCCATCCAAAACACCGTTGGGTCTTCGATTGGAGTATATGATATGTG AAGCATCAAATAAGTCATCGCAACTTGTTGATTTCCTTGTGCAGAACAATGGAAAGAAAA TAATGGTGTACTTCGCAACATGTGCTTGTGTAGATTACTGGGCTATTGTTCTCCCGCTGT TGGACTCACTTAAAGGTTCTCCAATAATTCCTTATCATGGGAAGATGAAGCAGGGCCCTC GTGAGAAAGCTTTGGCATCATTTTCAGCTCTCTCAAGTGGTATTCTAGTTTGCACTGATG TTGCAGCAAGGGGTCTTGACATACCACATGTTGATCTGATTGTGCAGTATGATCCACCTC AAGATCCCAATGTGTTCATACATAGAGCTGGCCGTACTGCACGTTATGATCAAGAAGGAG ATGCTATTGTATTCCTCTTACCGAAGGAAGATACTTATGTTGAGTTCTTGAAGAGGAGAG GTGTACCCCTCACTGAAAGGGAGTGTTCCACAAATGCTGTAGATATTGTACCACAGATCA GAAGTGCTGCATTGGAAGACCGAAATGTCATGGAGAAAGGGCTTACAGCTTTTGTTTCGT TTGTTCGGGCATACAAGGAGCACCACTGTTCTTACATTTTCAGTTGGAAAGACCTTGAAA TTGGAAGGTTGGGTATGGAGTACGGCTTACTCCAAATTCCATCTATGCCAGAAGTTAAGC ACCATTCTCTTTCATTGGAAGGGTTTACTCCTGTTAAAGATGTCGATGTTACAAAAATCA AGTACAAGGATAAAGCTCGAGAAAAACAACGGCAGAAGACATTGAAAAGGAAAGCAGAAG AACTAGCTCTAAGGCCAGAGATAGAGAAGAGGAGGAAAGCCCCGGAGAAGCCTGAAAAGC CAAAGCGGAAGAAGACAGGTAAACAGCGTCAAGCAGTCCAAACCAAGGAGGACATGGATG AGCTCGCGAATGAGTACCGGCTCCTGAAGAAGCTGAAGCGGGGGGTGATCGACGAGGACG AGTACGAGAAGCTCACCGGATTCGGGGAATCTGACGATGACGATTCCTCGGATGGCGGCG ATTCTGACCTGGACGAGAGAAAGGAGAGGGGCAACAAGGTGCTCAAGAAAATCAAGCAGA AAGGGAAGGCAAAAGGGTCTAGGAGATTTGAAGGGAGGAGCAAACAGAAGACTAGGAGAA GATGAAAAGTATATCTTGTTCTTAGCAATTTTGCTTTTTTTTTTCTTTAACCAGTGTAGG TTGCAAGTTTTGCCCTGGCTATTGTATGTTCGATTTTGTGATTTGTGACAAGGACGGTGA ATGAGCATGAGCATCATTCATAGAAGATAGTGCCATCTCT