Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0164300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:3320451:3321035:-1 gene:Os01g0164300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os01t0164300-00)
Sequence

ATGGCTGCCTTCCTCCACCTCGCCATCCTCGTCTCCCTCCTGGCCGCCGGCGCCACCGCC
AACAACGGCTACACCACACCATCGCCACCGCCACCACCGCAGCACACGCCGCCGCCATCG
CCACCGCCACCGGCGCCAGCGGCGCACCAAAGCAGCGACAAGGTGCTAGTGAGGGTGGAG
GGGAAGGTGTACTGCCAGAGCTGCGAGCACCGCAACTCGTGGAGCCTCGACGGCGCGAGG
CCGCTGCGCGGGGCGGAGGTGTCGGTCACCTGCCGCGACGCCAAGAACCGGGCGGCGTGG
TGGAGGCTGGCCGTCGCCGACGAGAGCGGCTACTTCCTCGCGGAGTTCGGCGTCACCAGG
GCGTCCGACTTCCTCGGCGCCGACCCGCGGGGGGCGTGCTACGCGCGGCTGCTGTCGTCG
CCGGACCGCAAGTGCGACGGCCTCACCAACATCAACGCCGGCATGGTGGGCGCGCCGCTC
CGCGACGAGGGCAAGCGGTGGCCGGGGCAGGGCTACGACAACGTCGTCTACGCCGCCGGC
CCGCTCGCCTTCCGGCCGGCGAACTGCCCGCCCAAGCACTACTAG

Peptide Sequence

PEP ID

Os01t0164300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:3320451:3321035:-1 gene:Os01g0164300 transcript:Os01t0164300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os01t0164300-00)
Sequence

MAAFLHLAILVSLLAAGATANNGYTTPSPPPPPQHTPPPSPPPPAPAAHQSSDKVLVRVE
GKVYCQSCEHRNSWSLDGARPLRGAEVSVTCRDAKNRAAWWRLAVADESGYFLAEFGVTR
ASDFLGADPRGACYARLLSSPDRKCDGLTNINAGMVGAPLRDEGKRWPGQGYDNVVYAAG
PLAFRPANCPPKHY

Transcript Sequence

Transcript ID

Os01t0164300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3320451:3321035:-1 gene:Os01g0164300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os01t0164300-00)
Sequence

ATGGCTGCCTTCCTCCACCTCGCCATCCTCGTCTCCCTCCTGGCCGCCGGCGCCACCGCC
AACAACGGCTACACCACACCATCGCCACCGCCACCACCGCAGCACACGCCGCCGCCATCG
CCACCGCCACCGGCGCCAGCGGCGCACCAAAGCAGCGACAAGGTGCTAGTGAGGGTGGAG
GGGAAGGTGTACTGCCAGAGCTGCGAGCACCGCAACTCGTGGAGCCTCGACGGCGCGAGG
CCGCTGCGCGGGGCGGAGGTGTCGGTCACCTGCCGCGACGCCAAGAACCGGGCGGCGTGG
TGGAGGCTGGCCGTCGCCGACGAGAGCGGCTACTTCCTCGCGGAGTTCGGCGTCACCAGG
GCGTCCGACTTCCTCGGCGCCGACCCGCGGGGGGCGTGCTACGCGCGGCTGCTGTCGTCG
CCGGACCGCAAGTGCGACGGCCTCACCAACATCAACGCCGGCATGGTGGGCGCGCCGCTC
CGCGACGAGGGCAAGCGGTGGCCGGGGCAGGGCTACGACAACGTCGTCTACGCCGCCGGC
CCGCTCGCCTTCCGGCCGGCGAACTGCCCGCCCAAGCACTACTAG