Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0160200-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:3143601:3146812:-1 gene:Os01g0160200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0160200-02)
Sequence	ATGTCGTCCCCAATTGCCATTGGTCGTCGACACGGGCCACCACCACTGCTACTACACCTG CTCATCCTTCATCTCCTGTTAGGCTTCCAACACCTCTGCTACTCCCTTGCCACGTACAGC AACCGAAGTACTGCTGCCATGCCGGCCCCGTGCTTGCCCGACCAGGCAGCGGCGCTGCTC CGCCTGAAACATTCCTTCAACATGACCAACAAGTCCGAGTGCACCCTCGCATCATGGCGC GCCGGCACGGACTGCTGCCGCTGGGAGGGCGTCCGCTGCGGCGTCGGCATCGGCGTTGGC CATGTGACCTCGCTTGACCTCGGTGAGTGCGGATTGGAGAGCGCTGCTCTTGACCCTGCG CTTTTCGAGCTCACTTCGCTCAGGCACCTTAACCTCGCGTGGAACAATTTCAGCGGGTCT CATATTCCCACCATTGGGTTCGAACGGCTCACTGAGCTCACCTACCTCAATCTCTCCAAC TCCAAATTTGCAGGCCAGATACCAAATACAATAGGACGTCTCACTAATTTGATATCCCTT GACCTCTCCACTGATTTTTTCCTTATTGATCTAGATGATGAGTTCTTATCAGTTGCCACC TATTCACCCGCTTGGTTACTTGTGGCACCAAACATTGTGTCAATAGTCGCAAACCTCCAC AACCTGAAGGAACTTTATATGGGCACAATAGACTTGTCCAGCAACAGCATGGTACAGTGG TGCAGTGCCTTTTCAAACTCCACTACCCCTCAACTTCAGGTCCTTAGCTTACCATATTGC TACCTCGAGGTTCCCATTTGTGAATCATTGTCGGGTATACGCTCACTGAGTGAGATTAAC CTACAGTACAACTTCATACACGGTCCCATTCCAGAGTCCTTTGGAGATTTACCTTCCCTA AGTGTTCTTAGTCTTACACACAACAGTCTAGAAGGGAGCTTCCCAAGTAGAATCTTCCAG AACAAAAACTTAACCTCTGTTGATGTTAGGTACAACTTCGAACTCTCCGGTTCGTTGCCA AAAAATATCTCATCAAATGACATTTTGGTAGATCTTCTTGTTAGCAGTACTAACTTCTCT GGTCCAATCCCTAACTCAGTAGGCAACATCAAATCCTTGGAAAATTTGGGTGTTGCATCA AGTGACTTCTCCCAAGAGCTTCCCTCTTCTATTGGCCAGCTGAGATCGTTGAATTCGTTA GAGATTACAGGGGCTGGTGTAGTAGGAGCAGTACCATCTTGGATTGCAAATTTGACTTCA TTGACCCTTCTCGACTTCTCGAACTGTGGCTTATCTGGGAAGATACCATCTGCGATAGGT GCTATCAAGAATCTGAAGAGGTTAGCGTTATACAAATGTAACTTTTCTGGCCAAATACCT CAAGATCTATTTAACCTAACTCAATTGAGAGTCATATATCTTCAATATAATAACTTCATT GGTACGTTGGAGCTCAGCTCATTTTGGAAACTACCAGACCTATTTTCTTTGAATCTTTCC AACAACAAACTATCAGTTGTAGATGGTGAGAAAAATAATTCTTCATGGGTGTCCATAAAC TATTTCTACACCTTGCGCCTAGCATATTGTAACATATCCAATTTCCCTAGTGCCTTGAGT CTCATGCCTTGGGTTGGAAATCTTGATCTTTCAGGAAATCAGATCCATGGTACTATACCT CAGTGGGCGTGGGAAACTTCGAGCGAGTTGTTTATCCTCAACTTATTACACAACAAATTC GACAATATAGGATATAATTATCTTCCATTTTACTTAGAGATTGTTGATCTCAGTTATAAC TTATTCCAAGGACCCATACCTATAACTGGACCTGACACTTGGTTGCTCGATTGCTCAAAC AACCGGTTCTCATCCATGCCATTTAACTTCAGTTCCCAGCTTAGTGGGATGTCCTATCTC ATGGCCTCCAGAAACAACCTATCTGGAGAAATTCCACTCTCAATTTGTGATGCAAGGGAC ATTCTGCTCCTTGATCTTTCTTACAACAATTTAAGTGGCTTGATTCCACTTTGTTTACTG GAGGATATCAATTCCCTTAGTGTGTTCAACTTGAAAGCAAATCAACTTCATGGTGAGTTA CCTCGTAATATCAAGAAAGGATGTGCATTAGAGGCATTAGATTTCAGTGAGAACATGTTT GAAGGACAACTACCCACATCTCTAGTTGCTTGCAGAGATTTGGAGGTTTTAGACATTGGA AATAATCAGATTAGCGGTGGTTTTCCATGTTGGGCTAGTATGCTTCCTAAACTTCAGGTT CTTGTCCTGAAGTCCAACAAGTTCACCGGAGAGGTGGGGTCTTCTGCCATCGAAAAAGAT AACACTTGCGAATTTGCAAATCTACGGATTCTTGATTTGGCTTCAAACAACTTTTCTGGT ACTCTACATCACAAGTGGTTGAAAAGGTTAAAATCCATGATGGAGACATCTTCTAGTGCG ACATTGCTTATGCAATATCAGCACAACGTGCATAGTACAACATATCAGTTTTCTACTTCA ATCGCATATAAAGGGTATGAAGTCACATTTACAAAAATCTTGAGGACCCTTGTAGTCATC GATGTTTCAGACAATGCACTCCATGGTAGCATTCCCAAGTCAATTGGAGAGCTCGTTCTC CTCCGTGGGCTAAACATGTCACATAATGCCCTCACAGGACCAATTCCATCTCAGCTTGGT GCTCTGCATGAACTCGAGTCATTGGACCTCTCATCAAATGATCTTTCAGGGGAGATTCCA CAGGAGTTAGCACAGCTACACTTCCTCTCAGTGCTGAACCTGTCCTACAACGGTTTGGTT GGGAGAATACCAGATTCACCCCAGTTCTCGAACAATCTCTCCTATCTGGGGAACATTGGT CTATGTGGGTTTCCATTGTCCAAGGAATGCAGCAACATGACAACACCACCAAGCTCACAT CCTTCAGAGGAAAAACATGTGGATGTTATACTGTTCCTCTTTGTTGGACTTGGAGTTGGC ATCGGGTTTGCAGTTATAATCGTTGTGACATGGGGAATCCGCATCAAGAAAAGGTCCCAA GACAGCAGATTTCCGTTTTGGAAAAAAGTTCTCTGTATGTAA

Peptide Sequence

PEP ID	Os01t0160200-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:3143601:3146812:-1 gene:Os01g0160200 transcript:Os01t0160200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0160200-02)
Sequence	MSSPIAIGRRHGPPPLLLHLLILHLLLGFQHLCYSLATYSNRSTAAMPAPCLPDQAAALL RLKHSFNMTNKSECTLASWRAGTDCCRWEGVRCGVGIGVGHVTSLDLGECGLESAALDPA LFELTSLRHLNLAWNNFSGSHIPTIGFERLTELTYLNLSNSKFAGQIPNTIGRLTNLISL DLSTDFFLIDLDDEFLSVATYSPAWLLVAPNIVSIVANLHNLKELYMGTIDLSSNSMVQW CSAFSNSTTPQLQVLSLPYCYLEVPICESLSGIRSLSEINLQYNFIHGPIPESFGDLPSL SVLSLTHNSLEGSFPSRIFQNKNLTSVDVRYNFELSGSLPKNISSNDILVDLLVSSTNFS GPIPNSVGNIKSLENLGVASSDFSQELPSSIGQLRSLNSLEITGAGVVGAVPSWIANLTS LTLLDFSNCGLSGKIPSAIGAIKNLKRLALYKCNFSGQIPQDLFNLTQLRVIYLQYNNFI GTLELSSFWKLPDLFSLNLSNNKLSVVDGEKNNSSWVSINYFYTLRLAYCNISNFPSALS LMPWVGNLDLSGNQIHGTIPQWAWETSSELFILNLLHNKFDNIGYNYLPFYLEIVDLSYN LFQGPIPITGPDTWLLDCSNNRFSSMPFNFSSQLSGMSYLMASRNNLSGEIPLSICDARD ILLLDLSYNNLSGLIPLCLLEDINSLSVFNLKANQLHGELPRNIKKGCALEALDFSENMF EGQLPTSLVACRDLEVLDIGNNQISGGFPCWASMLPKLQVLVLKSNKFTGEVGSSAIEKD NTCEFANLRILDLASNNFSGTLHHKWLKRLKSMMETSSSATLLMQYQHNVHSTTYQFSTS IAYKGYEVTFTKILRTLVVIDVSDNALHGSIPKSIGELVLLRGLNMSHNALTGPIPSQLG ALHELESLDLSSNDLSGEIPQELAQLHFLSVLNLSYNGLVGRIPDSPQFSNNLSYLGNIG LCGFPLSKECSNMTTPPSSHPSEEKHVDVILFLFVGLGVGIGFAVIIVVTWGIRIKKRSQ DSRFPFWKKVLCM

Transcript Sequence

Transcript ID	Os01t0160200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3143601:3146812:-1 gene:Os01g0160200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os01t0160200-02)
Sequence	AGTTCTCCGATAAACTAAACCACACCAAGACACCAAGTTGATCGTCGGCGACATGTCGTC CCCAATTGCCATTGGTCGTCGACACGGGCCACCACCACTGCTACTACACCTGCTCATCCT TCATCTCCTGTTAGGCTTCCAACACCTCTGCTACTCCCTTGCCACGTACAGCAACCGAAG TACTGCTGCCATGCCGGCCCCGTGCTTGCCCGACCAGGCAGCGGCGCTGCTCCGCCTGAA ACATTCCTTCAACATGACCAACAAGTCCGAGTGCACCCTCGCATCATGGCGCGCCGGCAC GGACTGCTGCCGCTGGGAGGGCGTCCGCTGCGGCGTCGGCATCGGCGTTGGCCATGTGAC CTCGCTTGACCTCGGTGAGTGCGGATTGGAGAGCGCTGCTCTTGACCCTGCGCTTTTCGA GCTCACTTCGCTCAGGCACCTTAACCTCGCGTGGAACAATTTCAGCGGGTCTCATATTCC CACCATTGGGTTCGAACGGCTCACTGAGCTCACCTACCTCAATCTCTCCAACTCCAAATT TGCAGGCCAGATACCAAATACAATAGGACGTCTCACTAATTTGATATCCCTTGACCTCTC CACTGATTTTTTCCTTATTGATCTAGATGATGAGTTCTTATCAGTTGCCACCTATTCACC CGCTTGGTTACTTGTGGCACCAAACATTGTGTCAATAGTCGCAAACCTCCACAACCTGAA GGAACTTTATATGGGCACAATAGACTTGTCCAGCAACAGCATGGTACAGTGGTGCAGTGC CTTTTCAAACTCCACTACCCCTCAACTTCAGGTCCTTAGCTTACCATATTGCTACCTCGA GGTTCCCATTTGTGAATCATTGTCGGGTATACGCTCACTGAGTGAGATTAACCTACAGTA CAACTTCATACACGGTCCCATTCCAGAGTCCTTTGGAGATTTACCTTCCCTAAGTGTTCT TAGTCTTACACACAACAGTCTAGAAGGGAGCTTCCCAAGTAGAATCTTCCAGAACAAAAA CTTAACCTCTGTTGATGTTAGGTACAACTTCGAACTCTCCGGTTCGTTGCCAAAAAATAT CTCATCAAATGACATTTTGGTAGATCTTCTTGTTAGCAGTACTAACTTCTCTGGTCCAAT CCCTAACTCAGTAGGCAACATCAAATCCTTGGAAAATTTGGGTGTTGCATCAAGTGACTT CTCCCAAGAGCTTCCCTCTTCTATTGGCCAGCTGAGATCGTTGAATTCGTTAGAGATTAC AGGGGCTGGTGTAGTAGGAGCAGTACCATCTTGGATTGCAAATTTGACTTCATTGACCCT TCTCGACTTCTCGAACTGTGGCTTATCTGGGAAGATACCATCTGCGATAGGTGCTATCAA GAATCTGAAGAGGTTAGCGTTATACAAATGTAACTTTTCTGGCCAAATACCTCAAGATCT ATTTAACCTAACTCAATTGAGAGTCATATATCTTCAATATAATAACTTCATTGGTACGTT GGAGCTCAGCTCATTTTGGAAACTACCAGACCTATTTTCTTTGAATCTTTCCAACAACAA ACTATCAGTTGTAGATGGTGAGAAAAATAATTCTTCATGGGTGTCCATAAACTATTTCTA CACCTTGCGCCTAGCATATTGTAACATATCCAATTTCCCTAGTGCCTTGAGTCTCATGCC TTGGGTTGGAAATCTTGATCTTTCAGGAAATCAGATCCATGGTACTATACCTCAGTGGGC GTGGGAAACTTCGAGCGAGTTGTTTATCCTCAACTTATTACACAACAAATTCGACAATAT AGGATATAATTATCTTCCATTTTACTTAGAGATTGTTGATCTCAGTTATAACTTATTCCA AGGACCCATACCTATAACTGGACCTGACACTTGGTTGCTCGATTGCTCAAACAACCGGTT CTCATCCATGCCATTTAACTTCAGTTCCCAGCTTAGTGGGATGTCCTATCTCATGGCCTC CAGAAACAACCTATCTGGAGAAATTCCACTCTCAATTTGTGATGCAAGGGACATTCTGCT CCTTGATCTTTCTTACAACAATTTAAGTGGCTTGATTCCACTTTGTTTACTGGAGGATAT CAATTCCCTTAGTGTGTTCAACTTGAAAGCAAATCAACTTCATGGTGAGTTACCTCGTAA TATCAAGAAAGGATGTGCATTAGAGGCATTAGATTTCAGTGAGAACATGTTTGAAGGACA ACTACCCACATCTCTAGTTGCTTGCAGAGATTTGGAGGTTTTAGACATTGGAAATAATCA GATTAGCGGTGGTTTTCCATGTTGGGCTAGTATGCTTCCTAAACTTCAGGTTCTTGTCCT GAAGTCCAACAAGTTCACCGGAGAGGTGGGGTCTTCTGCCATCGAAAAAGATAACACTTG CGAATTTGCAAATCTACGGATTCTTGATTTGGCTTCAAACAACTTTTCTGGTACTCTACA TCACAAGTGGTTGAAAAGGTTAAAATCCATGATGGAGACATCTTCTAGTGCGACATTGCT TATGCAATATCAGCACAACGTGCATAGTACAACATATCAGTTTTCTACTTCAATCGCATA TAAAGGGTATGAAGTCACATTTACAAAAATCTTGAGGACCCTTGTAGTCATCGATGTTTC AGACAATGCACTCCATGGTAGCATTCCCAAGTCAATTGGAGAGCTCGTTCTCCTCCGTGG GCTAAACATGTCACATAATGCCCTCACAGGACCAATTCCATCTCAGCTTGGTGCTCTGCA TGAACTCGAGTCATTGGACCTCTCATCAAATGATCTTTCAGGGGAGATTCCACAGGAGTT AGCACAGCTACACTTCCTCTCAGTGCTGAACCTGTCCTACAACGGTTTGGTTGGGAGAAT ACCAGATTCACCCCAGTTCTCGAACAATCTCTCCTATCTGGGGAACATTGGTCTATGTGG GTTTCCATTGTCCAAGGAATGCAGCAACATGACAACACCACCAAGCTCACATCCTTCAGA GGAAAAACATGTGGATGTTATACTGTTCCTCTTTGTTGGACTTGGAGTTGGCATCGGGTT TGCAGTTATAATCGTTGTGACATGGGGAATCCGCATCAAGAAAAGGTCCCAAGACAGCAG ATTTCCGTTTTGGAAAAAAGTTCTCTGTATGTAAGATTACTTGTTAGCTGAAAAAACGTA TATGCTTTAGTTACCACAGCTACGTTAAAACT