Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0160100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3136320:3140217:-1 gene:Os01g0160100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) (Fragment). (Os01t0160100-01)
Sequence	ATGGACACCACGATCGGCTCGGTGCCGACGGCCTCCGATGCGGCGGCGCCTGCCCCCGCG GCGAACTCCGCGCCGAGGGAGGCCACGCTGGGGCGGCACCTCGCGCGGCGGCTGGCGGAG GTCGGGGCGCGCGACGTGTTCACGGTGCCGGGGGACTTCAACCTCACGCTGCTCGACGAG CTCGAGGCGGAGGCGGGGGCGGGGCACGGCGGGGTGCGGCTCGTCGGGTGCTGCAACGAG CTCAACGCGGCGTACGCCGCCGACGGGTACGCCCGCGCGCGCGGCGGCGGGGTCGGGGCG TGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGCCATCAACGCCGTCGCCGGCGCGTTC AGCGAGAACCTCCCCGTGGTGTGCATCGTTGGGGGCCCCAACAGCAACGACTACGGGAGC AACCGCATCCTGCATCACACCATCGGGCTGCCTGATTTCACGCAGGAGCTCAGGTGCTTC CAGACTGTCACTTGCTATCAGGCGGTGGTGAACAACTTGGAGGATGCACATGAGCAGATT GATGCTGCCATCTCCACTGCAATAAAGGAGAGCAAGCCTGTTTACATAAGCATCAGCTGC AACCTCCCCTCTATCCCACATCCCACCTTTAGCCGCCACCCTGTTCCTTTCTTCCTGTCC CCAAGATTATCAAACCAGATGAACCTGGAGGCAGCAGTGGAAACTGCTGCAGCTTTCCTG AACAAAGCAGTCAAGCCAGTCCTCGTTGGTGGACCAAAAATGAGGGTGGCCAAAGCATGC AAATCCTTCGTAGAGCTGGCTGATGCCTGTGGTTATCCTGTTGCGGTCATGCCTTCTGCA AAGGGTCTTGTGCCAGAGCACCATCCTAGGTTTATTGGCACGTACTGGGGTGCTGTGAGC ACTCCATTTTGTGCTGAGATCGTCGAGTCAGCTGATGCATATCTATTTGCTGGCCCAATA TTTAATGACTACAGCTCGGTTGGATACTCACTACTTCTCAAGAAGGAGAAGGCCATCATC GTCCAGCCAGACCGGGTGGTGATAGGTCATGGGCCTGCGTTTGGGTGTGTTCTGATGAAG GACTTCCTGCATGCACTTTCAGCACGGCTGAAGAAAAACACGGCTGCATATGAGAACTAT CGTCGGATTTATGTGCCTCCGGGTGAACCTCCTTTGTCTGAGCCTGGAGAGCCATTGAGA GTGAATGTACTTTTCCAGCATATTCAGAAAATGTTGTCAGCCAACTCGGCTGTCATTGCT GAGACTGGAGACTCTTGGTTTAATTGCCAGAAGCTAAAGCTACCAGAGGGCTGTGGGTAC GAATTTCAAATGCAATATGGATCAATTGGTTGGTCGGTAGGTGCAACTCTGGGATATGCA AAGGCTGCTAAGGATAAGCGAGTCATTGCTTGCATCGGAGATGGAAGCTTTCAGGTGACG GCACAAGAAGTGTCGACAATGCTTCGTTGGGGGCAGAAAAGCATCATCTTCCTCATAAAC AATGGAGGGTACACCATCGAGGTGGAGATCCATGACGGTCCTTACAATGTCATCAAGAAT TGGAACTACACCGGTGTGGTGGAAGCGTTCCATAATGGCGAGGGGAAGTGCTACACGGCA AAGGTCCGAACTGAGGAGGAACTGAAGGAAGCAATTGAAGAAGCTCAGGGACCTAAGAAG GATTGCTTGTGCTTCATAGAGGTGATTGTACACAAGGATGACACAAGTAAGGAGCTTCTT GAGTGGGGCTCCAGAGTTTCTGCTGCAAATAGCCGCCCACCAAATCCTCAGTGA

Peptide Sequence

PEP ID	Os01t0160100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3136320:3140217:-1 gene:Os01g0160100 transcript:Os01t0160100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) (Fragment). (Os01t0160100-01)
Sequence	MDTTIGSVPTASDAAAPAPAANSAPREATLGRHLARRLAEVGARDVFTVPGDFNLTLLDE LEAEAGAGHGGVRLVGCCNELNAAYAADGYARARGGGVGACAVTFTVGGLSAINAVAGAF SENLPVVCIVGGPNSNDYGSNRILHHTIGLPDFTQELRCFQTVTCYQAVVNNLEDAHEQI DAAISTAIKESKPVYISISCNLPSIPHPTFSRHPVPFFLSPRLSNQMNLEAAVETAAAFL NKAVKPVLVGGPKMRVAKACKSFVELADACGYPVAVMPSAKGLVPEHHPRFIGTYWGAVS TPFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIGHGPAFGCVLMK DFLHALSARLKKNTAAYENYRRIYVPPGEPPLSEPGEPLRVNVLFQHIQKMLSANSAVIA ETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAKAAKDKRVIACIGDGSFQVT AQEVSTMLRWGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGVVEAFHNGEGKCYTA KVRTEEELKEAIEEAQGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ

Transcript Sequence

Transcript ID	Os01t0160100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3136320:3140217:-1 gene:Os01g0160100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) (Fragment). (Os01t0160100-01)
Sequence	AACTGTCCGACACGCCGAGAAGAAAAAAAAAAGAAAAAAAAGCAACGAACCAACTTTTCT CCCAAGGAAACTTCTCCACTTCTCTCCTCGCTTCCGCCGCCTCCTCCGCCGCCGCCGACA TGGACACCACGATCGGCTCGGTGCCGACGGCCTCCGATGCGGCGGCGCCTGCCCCCGCGG CGAACTCCGCGCCGAGGGAGGCCACGCTGGGGCGGCACCTCGCGCGGCGGCTGGCGGAGG TCGGGGCGCGCGACGTGTTCACGGTGCCGGGGGACTTCAACCTCACGCTGCTCGACGAGC TCGAGGCGGAGGCGGGGGCGGGGCACGGCGGGGTGCGGCTCGTCGGGTGCTGCAACGAGC TCAACGCGGCGTACGCCGCCGACGGGTACGCCCGCGCGCGCGGCGGCGGGGTCGGGGCGT GCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGCCATCAACGCCGTCGCCGGCGCGTTCA GCGAGAACCTCCCCGTGGTGTGCATCGTTGGGGGCCCCAACAGCAACGACTACGGGAGCA ACCGCATCCTGCATCACACCATCGGGCTGCCTGATTTCACGCAGGAGCTCAGGTGCTTCC AGACTGTCACTTGCTATCAGGCGGTGGTGAACAACTTGGAGGATGCACATGAGCAGATTG ATGCTGCCATCTCCACTGCAATAAAGGAGAGCAAGCCTGTTTACATAAGCATCAGCTGCA ACCTCCCCTCTATCCCACATCCCACCTTTAGCCGCCACCCTGTTCCTTTCTTCCTGTCCC CAAGATTATCAAACCAGATGAACCTGGAGGCAGCAGTGGAAACTGCTGCAGCTTTCCTGA ACAAAGCAGTCAAGCCAGTCCTCGTTGGTGGACCAAAAATGAGGGTGGCCAAAGCATGCA AATCCTTCGTAGAGCTGGCTGATGCCTGTGGTTATCCTGTTGCGGTCATGCCTTCTGCAA AGGGTCTTGTGCCAGAGCACCATCCTAGGTTTATTGGCACGTACTGGGGTGCTGTGAGCA CTCCATTTTGTGCTGAGATCGTCGAGTCAGCTGATGCATATCTATTTGCTGGCCCAATAT TTAATGACTACAGCTCGGTTGGATACTCACTACTTCTCAAGAAGGAGAAGGCCATCATCG TCCAGCCAGACCGGGTGGTGATAGGTCATGGGCCTGCGTTTGGGTGTGTTCTGATGAAGG ACTTCCTGCATGCACTTTCAGCACGGCTGAAGAAAAACACGGCTGCATATGAGAACTATC GTCGGATTTATGTGCCTCCGGGTGAACCTCCTTTGTCTGAGCCTGGAGAGCCATTGAGAG TGAATGTACTTTTCCAGCATATTCAGAAAATGTTGTCAGCCAACTCGGCTGTCATTGCTG AGACTGGAGACTCTTGGTTTAATTGCCAGAAGCTAAAGCTACCAGAGGGCTGTGGGTACG AATTTCAAATGCAATATGGATCAATTGGTTGGTCGGTAGGTGCAACTCTGGGATATGCAA AGGCTGCTAAGGATAAGCGAGTCATTGCTTGCATCGGAGATGGAAGCTTTCAGGTGACGG CACAAGAAGTGTCGACAATGCTTCGTTGGGGGCAGAAAAGCATCATCTTCCTCATAAACA ATGGAGGGTACACCATCGAGGTGGAGATCCATGACGGTCCTTACAATGTCATCAAGAATT GGAACTACACCGGTGTGGTGGAAGCGTTCCATAATGGCGAGGGGAAGTGCTACACGGCAA AGGTCCGAACTGAGGAGGAACTGAAGGAAGCAATTGAAGAAGCTCAGGGACCTAAGAAGG ATTGCTTGTGCTTCATAGAGGTGATTGTACACAAGGATGACACAAGTAAGGAGCTTCTTG AGTGGGGCTCCAGAGTTTCTGCTGCAAATAGCCGCCCACCAAATCCTCAGTGAGTACGTC AGATATCCGACTTGCCATGTTTTGATTAGGAAAATGTGAATTTCAGTGGTCTTCGAATAA GTTGCGCATGTAATTAGCCGCTGTTGTAAGTGTTGTAAGTGGTTAGAAATGATTTCAGAC TCTCATACCTGTATTATTGTCAATAAATCTGAAATCGATTTTTGGTTGCCCTTCC