Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0159400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3108117:3113940:-1 gene:Os01g0159400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6). (Os01t0159400-01)
Sequence	ATGGCGGGGAAGCAAGGAGATGGGCGCGAGGAGGATGGCGCTAAGGTCGGCCTCCCGGCG CTGGATATCTCGCTCGCGTTTCCGCAGGCCACGCCGGCATCCATCTTCCCGCCATCAGCA TCGGACTATTATCAGATTGATGATTTACTCACCACTGAAGAGCAGTCTATCAGGAAGAAT GTCAGGGCTATAATGGAGAAAGAAATTGCACCCATTATGGCAACGTACTGGGAGAAAGCA GAGTTCCCATTTCATGCCATTCCTAAACTTTCAAGCCTCGGTGTAGCTGGAGGCACAATA AAGGGATATGGGTGCCCAGGACTTTCAATAACAGCAAGTGCTATTACTATGGCAGAAATT GCACGGGTAGATGCAAGCTGCTCCACGTTCATTCTAGTACACTCCTCCCTTGCAATGGTC ACAATAGCTCTTTGTGGATCTGAGGTTCAGAAGCAGAAGTACTTGCCATCCCTTGCTCAA CTTACTGCTGTTGGTTGCTGGGCATTGACAGAACCAAATCATGGAAGCGATGCAAGCTCT TTGATAACTACAGCAACCAAGGTACCTGGTGGGTGGCACATAGATGGACAAAAACGCTGG ATTGGTAACAGTACTTTTGCTGATGTGCTCGTGGTATTAGCTAGGAATGCCAATACAAAA CAACTAAATGGATTTATTGTGAGGAAGGGTGCTCCTGGCTTGAAAGCTACAAAGATTGAG AACAAAATTGGTCTCAGAATGGTTCAGAACGGTGATATAGTTTTTAATAAAGTATTTGTC CCTGAGGAAGATCGACTGCCAGGTGTCAATTCATTTCAGGATATAAGCAAGGTCCTTGCT ATTTCACGTGTCATGGTGGCATGGCAACCGATTGGTATATCAATGGGGGTGTTTGATGTC TGCCATCGGTATCTGAAAGAAAGGAAACAGTTTGGAGTTCCTCTAGTAGCTTTTCAGCTG AACCAAGAAAAACTTGTGCGAATGCTTGGTAACATCCAAGCGATGCTTCTTGTTGGCTGG CGACTATGCAAGCTTTATGAGTCAGGGAAAATGACACCAGGGCATGCTAGTTTAGGGAAG GGTTGGACTTCCAGAATGGCTCGTGAGGTGGTTTCTCTCGGTCGAGAATTGTTGGGTGGA AATGGAATTTTGGCTGATTTTCTAGTTGCAAAGGCATTCTGTGACCTGGAGCCTATATAC TCATACGAAGGCACATACGACATCAACAGCCTGGTGACTGGTAGAGAAATAACTGGGATC GCAAGCTTCAAACCTGCCGCATTAGCAAAAGCTCGGTTATAA

Peptide Sequence

PEP ID	Os01t0159400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3108117:3113940:-1 gene:Os01g0159400 transcript:Os01t0159400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6). (Os01t0159400-01)
Sequence	MAGKQGDGREEDGAKVGLPALDISLAFPQATPASIFPPSASDYYQIDDLLTTEEQSIRKN VRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAGGTIKGYGCPGLSITASAITMAEI ARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASS LITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNANTKQLNGFIVRKGAPGLKATKIE NKIGLRMVQNGDIVFNKVFVPEEDRLPGVNSFQDISKVLAISRVMVAWQPIGISMGVFDV CHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLVGWRLCKLYESGKMTPGHASLGK GWTSRMAREVVSLGRELLGGNGILADFLVAKAFCDLEPIYSYEGTYDINSLVTGREITGI ASFKPAALAKARL

Transcript Sequence

Transcript ID	Os01t0159400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3108117:3113940:-1 gene:Os01g0159400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6). (Os01t0159400-01)
Sequence	ACTACTACTACTCCTCTTTCCCACTCCTCTCGCTTCCTTCCTCCTCCTCCCCTGCTTCGC CGCCGCGTGCTCCTCCGCCGCCGCCGGAGAAGCTCCAAGCCTCCTCCTCCTCCGGGCCGC CGGGAATGGCGGGGAAGCAAGGAGATGGGCGCGAGGAGGATGGCGCTAAGGTCGGCCTCC CGGCGCTGGATATCTCGCTCGCGTTTCCGCAGGCCACGCCGGCATCCATCTTCCCGCCAT CAGCATCGGACTATTATCAGATTGATGATTTACTCACCACTGAAGAGCAGTCTATCAGGA AGAATGTCAGGGCTATAATGGAGAAAGAAATTGCACCCATTATGGCAACGTACTGGGAGA AAGCAGAGTTCCCATTTCATGCCATTCCTAAACTTTCAAGCCTCGGTGTAGCTGGAGGCA CAATAAAGGGATATGGGTGCCCAGGACTTTCAATAACAGCAAGTGCTATTACTATGGCAG AAATTGCACGGGTAGATGCAAGCTGCTCCACGTTCATTCTAGTACACTCCTCCCTTGCAA TGGTCACAATAGCTCTTTGTGGATCTGAGGTTCAGAAGCAGAAGTACTTGCCATCCCTTG CTCAACTTACTGCTGTTGGTTGCTGGGCATTGACAGAACCAAATCATGGAAGCGATGCAA GCTCTTTGATAACTACAGCAACCAAGGTACCTGGTGGGTGGCACATAGATGGACAAAAAC GCTGGATTGGTAACAGTACTTTTGCTGATGTGCTCGTGGTATTAGCTAGGAATGCCAATA CAAAACAACTAAATGGATTTATTGTGAGGAAGGGTGCTCCTGGCTTGAAAGCTACAAAGA TTGAGAACAAAATTGGTCTCAGAATGGTTCAGAACGGTGATATAGTTTTTAATAAAGTAT TTGTCCCTGAGGAAGATCGACTGCCAGGTGTCAATTCATTTCAGGATATAAGCAAGGTCC TTGCTATTTCACGTGTCATGGTGGCATGGCAACCGATTGGTATATCAATGGGGGTGTTTG ATGTCTGCCATCGGTATCTGAAAGAAAGGAAACAGTTTGGAGTTCCTCTAGTAGCTTTTC AGCTGAACCAAGAAAAACTTGTGCGAATGCTTGGTAACATCCAAGCGATGCTTCTTGTTG GCTGGCGACTATGCAAGCTTTATGAGTCAGGGAAAATGACACCAGGGCATGCTAGTTTAG GGAAGGGTTGGACTTCCAGAATGGCTCGTGAGGTGGTTTCTCTCGGTCGAGAATTGTTGG GTGGAAATGGAATTTTGGCTGATTTTCTAGTTGCAAAGGCATTCTGTGACCTGGAGCCTA TATACTCATACGAAGGCACATACGACATCAACAGCCTGGTGACTGGTAGAGAAATAACTG GGATCGCAAGCTTCAAACCTGCCGCATTAGCAAAAGCTCGGTTATAACCATCATTTTCCG AAGAGGATAAAGCTACAGCTCACTGCAATTTCTTCTCAGATTGCTACTACAGGAAGCAAA TAAAAATCAGGTCCCCATGCACCGATTATTGGCCGGCTAATGCAGCATGATGCAGACCAA ATAGACTCCTTGGAAAATTCTCTGGTCAATCTTGGCTGGCTAGAAGGCTGTGCCGTGCGA GAGGATATCTAACGTATCCGAATCACCTCGTTGGAATCGTGTCCGGTGGTGGAGGACAGC ATGAATAAAAGCTCCGTCCTGTATGCCAAGTCTTGGCATTTAACTGTTGTATACATTTGT GAACGCTGTAAAATCTGAATAAAGGTCAAGAACAGTAGTGTCGAATTTTACCTCTTTCAA ACCTACACTGCCTGTTCTTGTTTTGGTTTGTTTCAAGCATGGGTCCAGAGAATAATTGTC CTTTCTCGATTGTTTGCCTTACTCTGTCAGTAAATTTTCTGACTTTAGACAGGAAACTTC TGTATATCTAGCATGCGCACTGCTACACGTGCTTAAAAGATTCAAGACAACTTTTACG