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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0159000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3091435:3092698:-1 gene:Os01g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsDOG1-like-2 description:Similar to cDNA clone:J023049H21, full insert sequence. (Os01t0159000-01)
Sequence

ATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCC
GGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCC
GCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAG
CTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCC
GCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAG
AACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCC
AAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGG
GCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGG
ATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGAT
GGTTAA

Peptide Sequence

PEP ID

Os01t0159000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3091435:3092698:-1 gene:Os01g0159000 transcript:Os01t0159000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsDOG1-like-2 description:Similar to cDNA clone:J023049H21, full insert sequence. (Os01t0159000-01)
Sequence

MPPPSPHPPHRNGNHVPAPSGESFAKFFECWISEQSRDLAALRSAASAATNPAAPPDDAE
LHRLVNRVLGHYEHYYRTKSAAASTDVLRMFSPSWTSTTENLYLWCGGWRPTAALHLLYS
KSGAQLETQLPVFLAGGGLGAGDLGDLSAEQLQAADQLQRITVSKEREIENAAASAQVSD
G

Transcript Sequence

Transcript ID

Os01t0159000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3091435:3092698:-1 gene:Os01g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsDOG1-like-2 description:Similar to cDNA clone:J023049H21, full insert sequence. (Os01t0159000-01)
Sequence

TTCACTCCACCACAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGC
CAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGG
CGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCG
ACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACG
ACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGA
CCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCA
CCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGC
TCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCG
GCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGC
TTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGG
TGAGTGATGGTTAATTTGTTCTTTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCA
AACGTGAACAATGCAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGG
CGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCG
CGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCT
CCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCA
CGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGT
GCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGC
TCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTA
TGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGA
TGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTAC
TACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCT
AATC