Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0158900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3085452:3090887:-1 gene:Os01g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, NF-X1-type domain containing protein. (Os01t0158900-01);Hypothetical conserved gene. (Os01t0158900-02)
Sequence	ATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGTCCTCTTCTCGCAAGCCGGTT CCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGCCGGCAGCGGCGGCGGCACCC GCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCGACCCCTCCTCGTACTCCTCC TCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGGCCGCCTCCGTCATCTCCTCC TACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGGTCGGGATCTTCCTCAGCTCC GCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCGATCCCATCCGCCCCTCCGAC CCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCCACCTCCACTGCATCCAGTCA TGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCTGGGGTTGCCCCAAATGCCGC TTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCTGCTTCTGCTCCAAGACGGTA GACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCGGCGACGTCTGTGGCCGACGT CTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCCTCCTGCTTTGCCACCCTGGG CCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGTGCTTTTGCGGCTCACATCGT GAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGGGGAAATGCAATAAACGCCTC GGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATGGGCCTTGCCCGCCTTGTGCG GTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGGAGGAGAGGCTATGCTCTGAA AGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGCAGTGTGGGAAGCATAGTTGT GAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCACTCCAAGGGCGACGAACTTGC CCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATGCAGAGGCTGCCACATGTGGA TCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAATGCCCAGAGCGGTGTCATCGT GGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAATCGTGCCGCTGTGGGGGTCTC AAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAAGGAAGTGTCAGCGTTTGCGA AACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGGGTGATTGTGCACCCTGCCCA GAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAATGCCTATCTCCATGCCACAGA GGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCATGCAACTGTGGGCAAACATTT TTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCACCCAAATGCTCAAAAAAATGC AATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGCCCCACAAGTGCCACTATGGA GCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTTCTTGTGGCCACAGGTGTAAG CTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGTTCACACTGAAACCAATAAAA AGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACACCATGCCCGCCATGCCAAGAA GTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAGAACGTGCAATACTTTGCTCC AAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACCCTCTCAACTGTGGCAATCAT TATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGAGTCAGCCTGAAGGAGATCAA TCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTGAGCCTTGCGAAGAATGTAAC CTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATCCCTGCCCTTTGCCATGCCAT CTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGACCATGTCATTGTGGTGCTATG GTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATGCTACAAAACAGCAGAAAGTA AGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATTGTCCCCATCTGTGCTCAGAA ATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCATGAAAAAGGTCAATGTCCGT TGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAGATGTTCTGAAGGAATACCGT CAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAATATGCAGTTGGCCTACTTGCC TGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATTCTGAGTTGCATCTCCGGAAA ATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATGTGCCCAAGCGCAGGAAGAGG CGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCCAGGAAATCAAAGCTGTTGCG TTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTGTAGCTGGATTGTACCTTTTG TGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACATGGAGGAGCAGAGGGCCAGG CAGAGGCATTTGAAGCCTGGAAGATTGTAA

Peptide Sequence

PEP ID	Os01t0158900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3085452:3090887:-1 gene:Os01g0158900 transcript:Os01t0158900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, NF-X1-type domain containing protein. (Os01t0158900-01);Hypothetical conserved gene. (Os01t0158900-02)
Sequence	MPFSYAAAASGSASSSRKPVPVAAAAARRPAPSPAAAAAPAPSPSNPSAVSDSDPSSYSS SGEETDLTASDPAAASVISSYLSVAGDGADLSKVGIFLSSAARRRSPPCLICFDPIRPSD PVWSCSASCFALLHLHCIQSWAHQSSSAAPSPTWGCPKCRFPYPKSQTPTSYLCFCSKTV DPAPDPWILPHSCGDVCGRRLNADRDSGCEHNCLLLCHPGPCPPCPAIVPNAMCFCGSHR ETRRCSHQRYSCSGKCNKRLGCGIHRCPVDCHDGPCPPCAVRGKHKCECGETMEERLCSE RVFQCKRECGGMLQCGKHSCERGCHAGKCGGCPLQGRRTCPCGKKDYPSLDCDAEAATCG STCEKVLGCGRHKCPERCHRGSCVETCRLVITKSCRCGGLKKEVPCYQELTCERKCQRLR NCGRHACRRRCCEGDCAPCPEVCDKRLRCGNHKCLSPCHRGACAPCPLMKTISCNCGQTF FEVPCGTEKNQKPPKCSKKCNIARLCRHKLECRPHKCHYGACPPCKLICGEELSCGHRCK LRCHGPIAPPNPEFTLKPIKRKKGKHIDSTPGTPCPPCQEVVLVPCFGHHLGQERAILCS KRRQFPCQNLCGNPLNCGNHYCTKACHVLQIPLSQPEGDQSAILSLASASAFAEPCEECN LPCQRVREPPCSHPCPLPCHLNDCPPCKALVKRPCHCGAMVHAFECMYYNNLNATKQQKV RSCGGPCHRKLPNCPHLCSEICHPGQCPSVDQCMKKVNVRCACNNLKKEWICQDVLKEYR QSGRDPKQIPKNQYAVGLLACGEDCVKKVKAADSELHLRKIQEIKTPAVEVENVPKRRKR RNRGQESVESSKFQEIKAVALKFLLVIFLCIIVVAGLYLLWKGVYRLSDWMNDMEEQRAR QRHLKPGRL

Transcript Sequence

Transcript ID	Os01t0158900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3085452:3090887:-1 gene:Os01g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, NF-X1-type domain containing protein. (Os01t0158900-01);Hypothetical conserved gene. (Os01t0158900-02)
Sequence	AGTCTGACAGCAAAAGGCCACACTCCTCACAAATCTCGTGCGCGCCACCGTCATCTCCGG CGACCACCTCACCGCCGGCCATGCCATTCTCCTACGCCGCCGCGGCCTCTGGCTCCGCGT CCTCTTCTCGCAAGCCGGTTCCCGTCGCCGCGGCCGCCGCCCGCCGACCCGCGCCCTCGC CGGCAGCGGCGGCGGCACCCGCGCCCTCGCCGTCAAACCCTAGCGCGGTCTCCGATTCCG ACCCCTCCTCGTACTCCTCCTCCGGGGAGGAGACCGACCTCACCGCCTCCGATCCGGCGG CCGCCTCCGTCATCTCCTCCTACCTCTCCGTTGCGGGGGATGGCGCCGACCTCTCCAAGG TCGGGATCTTCCTCAGCTCCGCGGCGCGCCGCCGATCGCCGCCGTGCCTGATATGCTTCG ATCCCATCCGCCCCTCCGACCCCGTCTGGTCCTGCTCCGCCTCCTGCTTCGCCCTCCTCC ACCTCCACTGCATCCAGTCATGGGCACATCAGTCATCCTCTGCCGCGCCTTCTCCCACCT GGGGTTGCCCCAAATGCCGCTTCCCCTATCCCAAATCCCAGACTCCCACCTCCTACCTCT GCTTCTGCTCCAAGACGGTAGACCCAGCTCCGGACCCCTGGATCCTCCCCCACTCCTGCG GCGACGTCTGTGGCCGACGTCTCAATGCAGACCGTGACTCTGGCTGTGAGCACAACTGCC TCCTGCTTTGCCACCCTGGGCCATGTCCACCGTGCCCGGCAATTGTTCCAAATGCTATGT GCTTTTGCGGCTCACATCGTGAGACGCGTCGATGCTCACATCAGCGTTATTCTTGCTCGG GGAAATGCAATAAACGCCTCGGCTGTGGAATCCACCGGTGTCCTGTGGATTGCCATGATG GGCCTTGCCCGCCTTGTGCGGTGCGAGGAAAGCACAAATGTGAGTGTGGAGAAACAATGG AGGAGAGGCTATGCTCTGAAAGGGTGTTCCAGTGCAAGAGGGAGTGTGGTGGGATGTTGC AGTGTGGGAAGCATAGTTGTGAGAGGGGTTGCCATGCTGGAAAGTGTGGAGGATGCCCAC TCCAAGGGCGACGAACTTGCCCATGTGGGAAGAAAGATTATCCAAGTTTGGACTGTGATG CAGAGGCTGCCACATGTGGATCAACTTGCGAGAAGGTGCTTGGGTGCGGGCGGCACAAAT GCCCAGAGCGGTGTCATCGTGGTTCATGCGTTGAGACATGTCGGCTTGTGATCACAAAAT CGTGCCGCTGTGGGGGTCTCAAGAAGGAGGTGCCTTGCTACCAAGAATTGACATGCGAAA GGAAGTGTCAGCGTTTGCGAAACTGTGGCCGCCATGCTTGTAGACGACGTTGCTGCGAGG GTGATTGTGCACCCTGCCCAGAGGTTTGTGACAAGAGGCTCAGATGTGGCAACCATAAAT GCCTATCTCCATGCCACAGAGGTGCTTGTGCACCTTGTCCTTTGATGAAGACCATTTCAT GCAACTGTGGGCAAACATTTTTTGAGGTGCCCTGTGGGACTGAGAAGAATCAGAAGCCAC CCAAATGCTCAAAAAAATGCAATATAGCTCGCCTTTGCAGGCACAAACTTGAATGCCGGC CCCACAAGTGCCACTATGGAGCTTGCCCACCTTGCAAACTAATCTGCGGAGAAGAACTTT CTTGTGGCCACAGGTGTAAGCTGAGGTGTCATGGCCCCATTGCTCCTCCAAATCCTGAGT TCACACTGAAACCAATAAAAAGGAAAAAGGGAAAGCATATAGACTCTACACCTGGAACAC CATGCCCGCCATGCCAAGAAGTTGTTTTGGTGCCATGCTTTGGACATCATCTTGGCCAAG AACGTGCAATACTTTGCTCCAAAAGGAGGCAGTTTCCATGTCAGAATTTATGTGGTAACC CTCTCAACTGTGGCAATCATTATTGTACGAAGGCTTGCCATGTGTTACAGATTCCATTGA GTCAGCCTGAAGGAGATCAATCGGCTATACTGTCTCTTGCTAGTGCAAGTGCATTCGCTG AGCCTTGCGAAGAATGTAACCTGCCTTGTCAAAGGGTCAGGGAGCCTCCATGTTCACATC CCTGCCCTTTGCCATGCCATCTTAACGATTGTCCACCTTGCAAAGCCCTTGTTAAAAGAC CATGTCATTGTGGTGCTATGGTACACGCTTTTGAGTGCATGTATTATAACAACTTAAATG CTACAAAACAGCAGAAAGTAAGGTCCTGTGGTGGCCCATGTCATAGAAAATTACCGAATT GTCCCCATCTGTGCTCAGAAATATGTCACCCTGGTCAGTGCCCATCAGTTGATCAGTGCA TGAAAAAGGTCAATGTCCGTTGTGCATGCAACAACCTTAAAAAAGAGTGGATATGTCAAG ATGTTCTGAAGGAATACCGTCAGTCTGGTCGTGACCCAAAACAAATACCTAAAAATCAAT ATGCAGTTGGCCTACTTGCCTGTGGTGAAGATTGTGTTAAAAAGGTTAAAGCTGCAGATT CTGAGTTGCATCTCCGGAAAATTCAGGAGATCAAGACCCCTGCTGTGGAAGTTGAAAATG TGCCCAAGCGCAGGAAGAGGCGTAACCGTGGCCAAGAAAGTGTTGAAAGCTCAAAATTCC AGGAAATCAAAGCTGTTGCGTTGAAATTTCTCCTGGTTATTTTTCTGTGCATAATCGTTG TAGCTGGATTGTACCTTTTGTGGAAAGGTGTTTACCGGCTTTCTGATTGGATGAATGACA TGGAGGAGCAGAGGGCCAGGCAGAGGCATTTGAAGCCTGGAAGATTGTAAATTAAAGACT ACGGAGGGTGTTTGTGGAATATTCACAACTGAGATGTGCATCGGTTCACCGTCAGGGATT GGTTTCGGATATATGGTAGTGAAAGATGTCATCATTTTGTTATTGGAGCCAAGCCCCGGA GTTTGTAACTAGTTTGGTCTCTTGTCCGAAGCTACTGGTTAATGGAAACTAAAGTTATCC GTGTCAAAAGAAAGATATCATTTTGTTCTTTGTTTGCCAAACAAAATGTAGGAACTCAAC AACCTTGTACTGTAGTTTACATGCATACTGTGTTCGAGTGAATTAAGGGTGTGTTTAGTT CACGTCAAAATTAGAAGTTTCATTGAAATTGAAACGATGTGATGGAAAAGTTAGAAGTT