Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0158200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3054481:3057198:1 gene:Os01g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 1 description:Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment). (Os01t0158200-01)
Sequence	ATGGCGGCGGCCGCCGTGCTCCTGGCCGCCATCCTACTGGCGCTGTCCCCTCTCCCCATG TCCCTCTCCGCCGGCGGCGGCGGCGGAGGTGACACTGGCACGGCCGAGGCGGCCGCGGAC CGAATCACGGCCCTGCCGGGGCAGCCACGGGTCAACTTCTCCATGTACTCCGGGTACGTC ACCGTCGACGCGGCCGCCGGGCGCGCGCTCTTCTACTGGCTCATCGAGGCCGCCGACCCG GCGTCCGCGCCGCTCGTGCTCTGGCTCAACGGCGGGCCCGGGTGCTCCTCCGTTGGGTAC GGCGCGTCCGAGGAGCTCGGCGCGTTCCGGATCAACCCCGACGGGAGGTCGCTCTACTTG AACCCCTACCCCTGGAACAGAGTGGCCAACATGCTGTTCTTGGACTCCCCCGCCGGCGTC GGCTACTCCTACTCCAACACCACCTCCGATCTGTTCACTGCTGGTGATAACAAGACAGCT CATGATTCATATGCTTTCTTGGTGAATTGGTTGGAACGGTTTCCGCAGTACAAGTACCGT GATTTCTACATCGCAGGCGAGAGCTATGGAGGGCACTATGTCCCTCAGTTGTCTCAGCTA GTGTACCGGAATAACAAAGACGTTGAAAAGCCTATCCTAAACTTTAAAGGCTTTATGGTT GGAAATGCGGTAATCGATGATTACCATGACTACGTTGGCACATTTGAGTACTGGTGGACA CACGGGCTGATATCTGATGATACATATCAGAAGCTGCAGGTGGCCTGTGATTTTGAATCA TCTGCTCACGCATCAGAAGCATGTAACAAGATTTATGAAGTGGCTGAGGCTGAACAAGGG AACATTGATGCATACAGCATCTATACGCCTACCTGTAAAAAAACTTCATTTCTCAAACGC AGGTTAATAAGGGGTAACTCGCCATGGTTGCCTAGAGGATATGATCCCTGCACTGAAAAG TACTCTACGAAGTACTACAACCTACCAGAAGTGCAAAAAGCATTTCATGCCAATGTCACT GGAATACCGTATGCCTGGACCACCTGCAGTGATGACTTGTTTTATTATTGGAAAGATTCA CCAAGGTCCATGCTTCCTATTTACCGTGAGCTGATTGCGGCTGGTCTAAGAATATGGGTT TTCAGCGGCGACGCTGATTCTGTAGTCCCCCTCACTGCGACAAGATACTCCATTGATGCA CTCTATCTACCTACTGTCACTAACTGGTATCCTTGGTATGATGATGAGGAGGTTGCTGGT TGGTGTCAAGTGTATCAAGGTTTGACACTGGTGACGATCCGAGGAGCAGGGCATGAAGTT CCTCTCCATCGTCCACGGCAAGCCTTAAAACTCTTTGAGCATTTCCTACAAGATAAGCCC ATGCCTCAACCTGTACATAGCATTCAATCCTTTTAG

Peptide Sequence

PEP ID	Os01t0158200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3054481:3057198:1 gene:Os01g0158200 transcript:Os01t0158200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 1 description:Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment). (Os01t0158200-01)
Sequence	MAAAAVLLAAILLALSPLPMSLSAGGGGGGDTGTAEAAADRITALPGQPRVNFSMYSGYV TVDAAAGRALFYWLIEAADPASAPLVLWLNGGPGCSSVGYGASEELGAFRINPDGRSLYL NPYPWNRVANMLFLDSPAGVGYSYSNTTSDLFTAGDNKTAHDSYAFLVNWLERFPQYKYR DFYIAGESYGGHYVPQLSQLVYRNNKDVEKPILNFKGFMVGNAVIDDYHDYVGTFEYWWT HGLISDDTYQKLQVACDFESSAHASEACNKIYEVAEAEQGNIDAYSIYTPTCKKTSFLKR RLIRGNSPWLPRGYDPCTEKYSTKYYNLPEVQKAFHANVTGIPYAWTTCSDDLFYYWKDS PRSMLPIYRELIAAGLRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDDEEVAG WCQVYQGLTLVTIRGAGHEVPLHRPRQALKLFEHFLQDKPMPQPVHSIQSF

Transcript Sequence

Transcript ID	Os01t0158200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3054481:3057198:1 gene:Os01g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 1 description:Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment). (Os01t0158200-01)
Sequence	ACTGACTTCCCACACAGACTGCTCCGAGCTCTCCATTCCCGCGACCCATTGACCCATCGG GATCCTGGAGCGCGCCAATGGCGGCGGCCGCCGTGCTCCTGGCCGCCATCCTACTGGCGC TGTCCCCTCTCCCCATGTCCCTCTCCGCCGGCGGCGGCGGCGGAGGTGACACTGGCACGG CCGAGGCGGCCGCGGACCGAATCACGGCCCTGCCGGGGCAGCCACGGGTCAACTTCTCCA TGTACTCCGGGTACGTCACCGTCGACGCGGCCGCCGGGCGCGCGCTCTTCTACTGGCTCA TCGAGGCCGCCGACCCGGCGTCCGCGCCGCTCGTGCTCTGGCTCAACGGCGGGCCCGGGT GCTCCTCCGTTGGGTACGGCGCGTCCGAGGAGCTCGGCGCGTTCCGGATCAACCCCGACG GGAGGTCGCTCTACTTGAACCCCTACCCCTGGAACAGAGTGGCCAACATGCTGTTCTTGG ACTCCCCCGCCGGCGTCGGCTACTCCTACTCCAACACCACCTCCGATCTGTTCACTGCTG GTGATAACAAGACAGCTCATGATTCATATGCTTTCTTGGTGAATTGGTTGGAACGGTTTC CGCAGTACAAGTACCGTGATTTCTACATCGCAGGCGAGAGCTATGGAGGGCACTATGTCC CTCAGTTGTCTCAGCTAGTGTACCGGAATAACAAAGACGTTGAAAAGCCTATCCTAAACT TTAAAGGCTTTATGGTTGGAAATGCGGTAATCGATGATTACCATGACTACGTTGGCACAT TTGAGTACTGGTGGACACACGGGCTGATATCTGATGATACATATCAGAAGCTGCAGGTGG CCTGTGATTTTGAATCATCTGCTCACGCATCAGAAGCATGTAACAAGATTTATGAAGTGG CTGAGGCTGAACAAGGGAACATTGATGCATACAGCATCTATACGCCTACCTGTAAAAAAA CTTCATTTCTCAAACGCAGGTTAATAAGGGGTAACTCGCCATGGTTGCCTAGAGGATATG ATCCCTGCACTGAAAAGTACTCTACGAAGTACTACAACCTACCAGAAGTGCAAAAAGCAT TTCATGCCAATGTCACTGGAATACCGTATGCCTGGACCACCTGCAGTGATGACTTGTTTT ATTATTGGAAAGATTCACCAAGGTCCATGCTTCCTATTTACCGTGAGCTGATTGCGGCTG GTCTAAGAATATGGGTTTTCAGCGGCGACGCTGATTCTGTAGTCCCCCTCACTGCGACAA GATACTCCATTGATGCACTCTATCTACCTACTGTCACTAACTGGTATCCTTGGTATGATG ATGAGGAGGTTGCTGGTTGGTGTCAAGTGTATCAAGGTTTGACACTGGTGACGATCCGAG GAGCAGGGCATGAAGTTCCTCTCCATCGTCCACGGCAAGCCTTAAAACTCTTTGAGCATT TCCTACAAGATAAGCCCATGCCTCAACCTGTACATAGCATTCAATCCTTTTAGAATTTTC TTCCATTTAAAGTGGAAGATCATGCCACGAGGCCATGATGTTGTATAATTTGAAGTCTGT CTCCCACATTTTCTGATGAACAGATGAAATCTGTTCAAATGACAGCTGGCCATCATTCTT AATTTATTCAACTATATGTTCCTAGTGACTTCAGAAATAATGCCCATCCTGTTGAATATT TCCTTTTCGGTTTATGTATACCACAAGACCAAGATGGAAATATAGTTTTTCATTTTATGA GCTTGCTTC