Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0158000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:3047456:3052121:1 gene:Os01g0158000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 2 description:Importin alpha-2 subunit. (Os01t0158000-01);Importin alpha-2 subunit. (Os01t0158000-02)
Sequence	ATGGCCGACGACAGCGCCTCCCCGTCGCCGTCCTCGGCCTCGCCGCTCCAGCACCACCGC GAAGCCCTCAAGTCGTCAGTGCGCAACACGGCAGCTAGCCGGAGGCGGGAACAAGCTATT GCGATTGGGAAGGAAAGACGGGAAGCCTTGATCCGTGCAAAGCGTGTGTGTCGAGCTCCA ATTTCTGGCAGTGATGAAGCTGAAATGGAAGAGGGTGATATGGTGGTCGATGAGGAGAAA GCATGTCTTGAGGCAAAGACTGCTCATGCTGTTGAAGAATTGAAATCTGCTTTGTCAATC CAGGGGAAAGGCGTTCAGAAGAAGAAGATAGAGGCGCTTCGTGATTTGAGACGCTTGTTG TCACAGCCTGAAGTACCTCTAGTTGATACTGCAATTAAAGCTGGAGCAGTCCCTCTTTTA GTGCAATATCTATCCTTTGGATCATCAGATGAGCAGTTGCTAGAGGCAGCTTGGTGCCTT ACAAACATAGCAGCTGGGGAACCAGAAGAAACAAAATCCTTGCTGCCTGCTCTACCATTG CTTATTGCTCACCTTGGTGAAAAGAGCTCCACACTTGTTGCCGAGCAATGTGCATGGGCC ATTGGTAATGTTGCTGGTGAAGGAGCAGAGCTGAGAAGCACATTACTTGCACAAGGTGCT TTGCGGCCTCTTACCCGTTTAATGTTCTCCAGTAAAGGTTCTACAGCAAGAACTGCTGCT TGGGCTATGTCAAATCTCATCAAGGGGCCTGATCCAAAGGCTGCAAATGAGCTTATTACC ATTGATGGCGTGCTAAATGCAATTATAGCGAGCTTGGAAAAGGAGGACGAAGAGTTAGCA ACTGAGGTGGCATGGGTTGTGGTCTATCTTTCAGCACTTTCAGACAGAGGTATTAGCTTA ATAGTAAGAAGTTCTGTGCCTCAGCTGCTGATAGGACGACTGTTCTCATCTGAGAACTTG CAGTTGCTGATCCCAGTGCTTCGTGGTTTGGGAAATCTTATTGCCGCTGATGACTACATG GTTGATTCAGTCCTAACTGTTGGACACAATATCATTGATCAAGCATTGTCAGGTCTTATA AAATGTTTGAAGAGTGATAACAGGGTTCTCAGAAAGGAGTCATCATGGGCATTGTCAAAT ATAGCAGCAGGCAGTTTTGAGCACAAGAAACTGATTTTTGCCAGTGAGGCCACGCCTGTG CTGATACGCCTTGTCACCAGCATGCAATTTGATATTCGCAGGGAAGCAGCATACACCCTA GGAAATCTGTGTGTTGTCCCTACTGGAAATTGCGAACTCCCAAAGATAATCGTGGAACAT CTAGTCGCTATCGTAGATGGTGGAGCCCTTCCAGGATTTATACACTTGGTCAGGTCTGCT GATGTAGATACCGCAGGGCTTGGTCTTCAGTTCCTAGAACTGGTGATGAGGGGGTATCCC AATAAGCAAGGCCCAAAGCTTGTGGAAATGGAGGACGGCATTGAGGCCATGGAGAGGTTT CAATTCCACGAGAACGAGCAGATGAGGAACATGGCCAATGGTTTGGTCGACGAATACTTC GGTGAGGATTATGGCCTCGACGAGTGA

Peptide Sequence

PEP ID	Os01t0158000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:3047456:3052121:1 gene:Os01g0158000 transcript:Os01t0158000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 2 description:Importin alpha-2 subunit. (Os01t0158000-01);Importin alpha-2 subunit. (Os01t0158000-02)
Sequence	MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQGKGVQKKKIEALRDLRRLL SQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLLPALPL LIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLLAQGALRPLTRLMFSSKGSTARTAA WAMSNLIKGPDPKAANELITIDGVLNAIIASLEKEDEELATEVAWVVVYLSALSDRGISL IVRSSVPQLLIGRLFSSENLQLLIPVLRGLGNLIAADDYMVDSVLTVGHNIIDQALSGLI KCLKSDNRVLRKESSWALSNIAAGSFEHKKLIFASEATPVLIRLVTSMQFDIRREAAYTL GNLCVVPTGNCELPKIIVEHLVAIVDGGALPGFIHLVRSADVDTAGLGLQFLELVMRGYP NKQGPKLVEMEDGIEAMERFQFHENEQMRNMANGLVDEYFGEDYGLDE

Transcript Sequence

Transcript ID	Os01t0158000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3047456:3052121:1 gene:Os01g0158000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IMPORTIN ALPHA 2 description:Importin alpha-2 subunit. (Os01t0158000-01);Importin alpha-2 subunit. (Os01t0158000-02)
Sequence	ACTTTCGCCAAACCTCGCGGCCGTCGAGCTCCGCCGCCGGAGAAAAAGATGGCCGACGAC AGCGCCTCCCCGTCGCCGTCCTCGGCCTCGCCGCTCCAGCACCACCGCGAAGCCCTCAAG TCGTCAGTGCGCAACACGGCAGCTAGCCGGAGGCGGGAACAAGCTATTGCGATTGGGAAG GAAAGACGGGAAGCCTTGATCCGTGCAAAGCGTGTGTGTCGAGCTCCAATTTCTGGCAGT GATGAAGCTGAAATGGAAGAGGGTGATATGGTGGTCGATGAGGAGAAAGCATGTCTTGAG GCAAAGACTGCTCATGCTGTTGAAGAATTGAAATCTGCTTTGTCAATCCAGGGGAAAGGC GTTCAGAAGAAGAAGATAGAGGCGCTTCGTGATTTGAGACGCTTGTTGTCACAGCCTGAA GTACCTCTAGTTGATACTGCAATTAAAGCTGGAGCAGTCCCTCTTTTAGTGCAATATCTA TCCTTTGGATCATCAGATGAGCAGTTGCTAGAGGCAGCTTGGTGCCTTACAAACATAGCA GCTGGGGAACCAGAAGAAACAAAATCCTTGCTGCCTGCTCTACCATTGCTTATTGCTCAC CTTGGTGAAAAGAGCTCCACACTTGTTGCCGAGCAATGTGCATGGGCCATTGGTAATGTT GCTGGTGAAGGAGCAGAGCTGAGAAGCACATTACTTGCACAAGGTGCTTTGCGGCCTCTT ACCCGTTTAATGTTCTCCAGTAAAGGTTCTACAGCAAGAACTGCTGCTTGGGCTATGTCA AATCTCATCAAGGGGCCTGATCCAAAGGCTGCAAATGAGCTTATTACCATTGATGGCGTG CTAAATGCAATTATAGCGAGCTTGGAAAAGGAGGACGAAGAGTTAGCAACTGAGGTGGCA TGGGTTGTGGTCTATCTTTCAGCACTTTCAGACAGAGGTATTAGCTTAATAGTAAGAAGT TCTGTGCCTCAGCTGCTGATAGGACGACTGTTCTCATCTGAGAACTTGCAGTTGCTGATC CCAGTGCTTCGTGGTTTGGGAAATCTTATTGCCGCTGATGACTACATGGTTGATTCAGTC CTAACTGTTGGACACAATATCATTGATCAAGCATTGTCAGGTCTTATAAAATGTTTGAAG AGTGATAACAGGGTTCTCAGAAAGGAGTCATCATGGGCATTGTCAAATATAGCAGCAGGC AGTTTTGAGCACAAGAAACTGATTTTTGCCAGTGAGGCCACGCCTGTGCTGATACGCCTT GTCACCAGCATGCAATTTGATATTCGCAGGGAAGCAGCATACACCCTAGGAAATCTGTGT GTTGTCCCTACTGGAAATTGCGAACTCCCAAAGATAATCGTGGAACATCTAGTCGCTATC GTAGATGGTGGAGCCCTTCCAGGATTTATACACTTGGTCAGGTCTGCTGATGTAGATACC GCAGGGCTTGGTCTTCAGTTCCTAGAACTGGTGATGAGGGGGTATCCCAATAAGCAAGGC CCAAAGCTTGTGGAAATGGAGGACGGCATTGAGGCCATGGAGAGGTTTCAATTCCACGAG AACGAGCAGATGAGGAACATGGCCAATGGTTTGGTCGACGAATACTTCGGTGAGGATTAT GGCCTCGACGAGTGACTCAACTAATTACCATTCGTACATCAGGTTAAATTGTAATGGCAG CAGCTGTTCATGTGTTCGTACTGTAAAAATGCATTCTCAGTTTCTAACAGCACTGGAACT TTAGAATGAGAAAATCATTTGCTTGTT