Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0157900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3044488:3047128:1 gene:Os01g0157900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os01t0157900-01)
Sequence

ATGGGCGCGGCCGACGACGCCAACCACCGCCACGAGGAGGCCAGCCCCCTCCTGCCACCG
GGCGGCGGCGGCGGCGGCGGCAAGAAGCTCCACCAGTCTCCGCCTCCATCGCCTCCGGAG
GCAGCCAAGTGCTGCGCCGATGGAGTCCCCGTCGTTATGGGCGAGCCGCTCGGGGCACCC
GCACCGCCGCGGGAGAGCTGGAACTCGGGGGTGCTCTCCTGCCTCGGCCGCAACGACGAG
TTCTGCAGCAGCGACGTCGAAGTGTGTCTTCTTGGAAGCATAGCACCATGTGTGCTGTAT
GGTAGTAATGTTGAGAGGTTTGCAGCCAGACCAGGAACTTTTGCAAACAGCTGCTTGCCT
TACACTGGCCTCTATATGCTTGGGAATGCTCTCTTCGGGTGGAACTGCATAGCCCCATGG
TTCTCTCATCACACTCGTACAGCTATTCGTCGACGATACAATCTTGAGGGTAGCTTTGAG
GCTTTCACTAAGCAATGTGGGTGCTGCCATGGCCTTGTTGAGGATGAGGGGAACCGTGAG
CACCTGGAGGTTGCCTGCGACCTTGCAACTCACTACTTCTGTCACCCTTGTGCGCTCTGC
CAGGAGGGACGCGAGCTGCGGCGCAGGGTCCCCCATCCTGGCTTCAACGGGCGATCTGTC
TTGGTCATGACGCCACCAAAGGAGCAGACTATGGGTCGTGGCATGTGA

Peptide Sequence

PEP ID

Os01t0157900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3044488:3047128:1 gene:Os01g0157900 transcript:Os01t0157900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os01t0157900-01)
Sequence

MGAADDANHRHEEASPLLPPGGGGGGGKKLHQSPPPSPPEAAKCCADGVPVVMGEPLGAP
APPRESWNSGVLSCLGRNDEFCSSDVEVCLLGSIAPCVLYGSNVERFAARPGTFANSCLP
YTGLYMLGNALFGWNCIAPWFSHHTRTAIRRRYNLEGSFEAFTKQCGCCHGLVEDEGNRE
HLEVACDLATHYFCHPCALCQEGRELRRRVPHPGFNGRSVLVMTPPKEQTMGRGM

Transcript Sequence

Transcript ID

Os01t0157900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3044488:3047128:1 gene:Os01g0157900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function Cys-rich family protein. (Os01t0157900-01)
Sequence

GATCTCTTCGCTGCGAAGCCATCTTCTTCTCGGTCTCCACGCGCTTTCACCTCCGTATTT
TACTCGCGCCCTTCTCTCTCTCCTCGACCTCATTCGCCTCGCCTCGCGTCTCGTCTCGTT
CGCCCCTCGCCACCACGCAACACGCCATGGGCGCGGCCGACGACGCCAACCACCGCCACG
AGGAGGCCAGCCCCCTCCTGCCACCGGGCGGCGGCGGCGGCGGCGGCAAGAAGCTCCACC
AGTCTCCGCCTCCATCGCCTCCGGAGGCAGCCAAGTGCTGCGCCGATGGAGTCCCCGTCG
TTATGGGCGAGCCGCTCGGGGCACCCGCACCGCCGCGGGAGAGCTGGAACTCGGGGGTGC
TCTCCTGCCTCGGCCGCAACGACGAGTTCTGCAGCAGCGACGTCGAAGTGTGTCTTCTTG
GAAGCATAGCACCATGTGTGCTGTATGGTAGTAATGTTGAGAGGTTTGCAGCCAGACCAG
GAACTTTTGCAAACAGCTGCTTGCCTTACACTGGCCTCTATATGCTTGGGAATGCTCTCT
TCGGGTGGAACTGCATAGCCCCATGGTTCTCTCATCACACTCGTACAGCTATTCGTCGAC
GATACAATCTTGAGGGTAGCTTTGAGGCTTTCACTAAGCAATGTGGGTGCTGCCATGGCC
TTGTTGAGGATGAGGGGAACCGTGAGCACCTGGAGGTTGCCTGCGACCTTGCAACTCACT
ACTTCTGTCACCCTTGTGCGCTCTGCCAGGAGGGACGCGAGCTGCGGCGCAGGGTCCCCC
ATCCTGGCTTCAACGGGCGATCTGTCTTGGTCATGACGCCACCAAAGGAGCAGACTATGG
GTCGTGGCATGTGAACCGTGCCAAACATCTGCTCTGCTCTATTTGCACTTGAGCTATTAT
GTGATGAATGTTCTCTACTGCCTTGGTGAAACTCTGTATGTTCGTCGGTAAATATGAGTC
TTGTGTGATATGGGATCATGATGGACAATGGAAACTCCAGCCTGTTTCTCTGAATTGTGT
TGATCGTCTTCGGTCTTTCTGTTCCGTATGGACCGCTTGTGTATTCTGTCATTCTGAATA
ACATTGTAATACTGTATCACGTTTGTGTTGGCAATCCACTTTTAAACTTATCG