Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0157200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3031479:3033009:1 gene:Os01g0157200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0157200-01)
Sequence

ATGGACGAGTGGGAGGAGCTGGCGCGGACAGTGCCGGCGACGCTCATGCAAGTCGGCTCC
GGGATGGAAGCCGTCAGGAAGATCCAGGTCGCCCACAGGAAGATCCAAGGGCGCGCTGGT
TTGATGCGCAACATACGCTTCGGGATGCCGGCGGCCATCGCCATGAGCCTCTTCGACGAC
CCGGCCCCCGTCGGAGTTTGCCCCACCGTGACCCTCGAGGAGGCCCGCTGCGAGATCTCG
CGGGGCGCCGCTCGCCACGCGATGGCCGACCACGTCTTCGTTCGCTACGTCGAGCTCCTC
GGCATCCAGCACGAGCCGCCGTGCACCAGCAGGGACACCCACCACCGGGAGGCCATCCGC
TTCACCGCCATGGCCCTGGAGAAGGTCAGGGAAGCCGCGTCGCTTGCAGAGGCGGCCAAG
GACGCCGTCGACATCGCCGAGACGCTCCTCCCGCAGCCCGAGCTGAAGACGGAGTGGGCG
TTGGCGGCCCAGGACCTCGCGGAACGCGCCGACTACGAAGCCACCCAGGCGCTGGAGTTT
GTGAAACGGGCGCGCGACGTCGTCGCTCTCGAGTTCTTCGACACCTGGAAGATTCTGCGT
CGCGGGAGAGCTCGATCGGCGGAGATGAAGGAGTGGAGAGAGCTAGCGCTGAAAGTGCCG
GGAACCATCATGCTCATCGGCGACGCCGAGCTGGAAACCCTCGAGTTGATCCAAGCCGCC
GTCAGCAAGTTCCAGAAGCATGTCGAGTTGCTGCAAGAGGTACGCCATGGGACGGCGACG
GCCACCGCCGTCGACAACTTCACCGACCCGGACCCCGAGGGAGCCTTGCCCACCGAGCTC
CTCGAGAACGCACGCCGCGGGATGTCCAAGAGCGCCGTTCGCCATGCGAAGGCCCACCAC
ATCTTCGCTCGCTACGCCGCGTTCCTCGGCATCCAAGGCGACGAGGAGTACCGCAGCTGG
GACAACAAGCACCAGGAAGCCGCCGGCAGCATGGTCGCGGCGCTGAAGAAAGTCATCGAC
GCCGTCTCGGATGCTGAGGCAGCCAAGGACGCCGTCGCCATGGTCGGGATCCTCCCCTAC
CAGTGCCCGCTGTGGGAATTGTGGGCGTTGAGGGCGCAGAACCAGACCTCCTTGTCCTCC
TTCAACGCCACCCTCGCGATACTAGACGTGCGACAGGCGCGCGAGGCCTTTTTTGTGGAG
GTCTTACGCGCCTGGTTGATTCTGCGTCGCTATGGATCTCTTCAACTCCTGGATGATTCT
GCATCGCTCTGGAGTTCCTCGACGCCTGCATGA

Peptide Sequence

PEP ID

Os01t0157200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3031479:3033009:1 gene:Os01g0157200 transcript:Os01t0157200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0157200-01)
Sequence

MDEWEELARTVPATLMQVGSGMEAVRKIQVAHRKIQGRAGLMRNIRFGMPAAIAMSLFDD
PAPVGVCPTVTLEEARCEISRGAARHAMADHVFVRYVELLGIQHEPPCTSRDTHHREAIR
FTAMALEKVREAASLAEAAKDAVDIAETLLPQPELKTEWALAAQDLAERADYEATQALEF
VKRARDVVALEFFDTWKILRRGRARSAEMKEWRELALKVPGTIMLIGDAELETLELIQAA
VSKFQKHVELLQEVRHGTATATAVDNFTDPDPEGALPTELLENARRGMSKSAVRHAKAHH
IFARYAAFLGIQGDEEYRSWDNKHQEAAGSMVAALKKVIDAVSDAEAAKDAVAMVGILPY
QCPLWELWALRAQNQTSLSSFNATLAILDVRQAREAFFVEVLRAWLILRRYGSLQLLDDS
ASLWSSSTPA

Transcript Sequence

Transcript ID

Os01t0157200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3031479:3033009:1 gene:Os01g0157200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0157200-01)
Sequence

AAACCGCCACACACACGCGCGCGGAAAACACTCCCAATCCCAAACCGAAGCGAGAAAGAG
CTCGAGAGGGAGAGATCGATCGGCGGTGCCGGCCGCCGGCGATGGACGAGTGGGAGGAGC
TGGCGCGGACAGTGCCGGCGACGCTCATGCAAGTCGGCTCCGGGATGGAAGCCGTCAGGA
AGATCCAGGTCGCCCACAGGAAGATCCAAGGGCGCGCTGGTTTGATGCGCAACATACGCT
TCGGGATGCCGGCGGCCATCGCCATGAGCCTCTTCGACGACCCGGCCCCCGTCGGAGTTT
GCCCCACCGTGACCCTCGAGGAGGCCCGCTGCGAGATCTCGCGGGGCGCCGCTCGCCACG
CGATGGCCGACCACGTCTTCGTTCGCTACGTCGAGCTCCTCGGCATCCAGCACGAGCCGC
CGTGCACCAGCAGGGACACCCACCACCGGGAGGCCATCCGCTTCACCGCCATGGCCCTGG
AGAAGGTCAGGGAAGCCGCGTCGCTTGCAGAGGCGGCCAAGGACGCCGTCGACATCGCCG
AGACGCTCCTCCCGCAGCCCGAGCTGAAGACGGAGTGGGCGTTGGCGGCCCAGGACCTCG
CGGAACGCGCCGACTACGAAGCCACCCAGGCGCTGGAGTTTGTGAAACGGGCGCGCGACG
TCGTCGCTCTCGAGTTCTTCGACACCTGGAAGATTCTGCGTCGCGGGAGAGCTCGATCGG
CGGAGATGAAGGAGTGGAGAGAGCTAGCGCTGAAAGTGCCGGGAACCATCATGCTCATCG
GCGACGCCGAGCTGGAAACCCTCGAGTTGATCCAAGCCGCCGTCAGCAAGTTCCAGAAGC
ATGTCGAGTTGCTGCAAGAGGTACGCCATGGGACGGCGACGGCCACCGCCGTCGACAACT
TCACCGACCCGGACCCCGAGGGAGCCTTGCCCACCGAGCTCCTCGAGAACGCACGCCGCG
GGATGTCCAAGAGCGCCGTTCGCCATGCGAAGGCCCACCACATCTTCGCTCGCTACGCCG
CGTTCCTCGGCATCCAAGGCGACGAGGAGTACCGCAGCTGGGACAACAAGCACCAGGAAG
CCGCCGGCAGCATGGTCGCGGCGCTGAAGAAAGTCATCGACGCCGTCTCGGATGCTGAGG
CAGCCAAGGACGCCGTCGCCATGGTCGGGATCCTCCCCTACCAGTGCCCGCTGTGGGAAT
TGTGGGCGTTGAGGGCGCAGAACCAGACCTCCTTGTCCTCCTTCAACGCCACCCTCGCGA
TACTAGACGTGCGACAGGCGCGCGAGGCCTTTTTTGTGGAGGTCTTACGCGCCTGGTTGA
TTCTGCGTCGCTATGGATCTCTTCAACTCCTGGATGATTCTGCATCGCTCTGGAGTTCCT
CGACGCCTGCATGATACGTTGACACCGCGTCGCGAAGCACGCAGGTTACCCGATCGAGCT
AGCTTGGTAATCGATCGATTGGTGGACTCGAAATTCTTGATCAGTTTGAAAACAACCACT
TGGATGTTTCTGTTTCTTCTGGAGTTCTACT