Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0155300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2966314:2967346:1 gene:Os01g0155300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to dirigent-like protein. (Os01t0155300-00)
Sequence

ATGGAGTTCAAGAAGCCAACGATCGGGATCTCCTCCTTCCTCCTCCTGCTCCTCGTGTCC
GCCGCCGCCGCGGCAAGGCCGACGCGCCAGCTAGTCGCCAACGACGGCACCGTTGCCGCG
CCCGCTGTCGCACCGGCCGCGGCGGACGTGGCGGCCGGTGTTGCCGATGCGCCGGTGGCT
GCTGCCAATGCCGACGTCCCGGCTGCTGCGGCAGCAATGGGCCCTGTGGCTGGCGCGGCG
GCGGCCGGAGCACCGATCGGCGCCAGCACCATCCCTGTGGCGGCGGGCGCGGGCGCGGTG
GGGATGAACGGCGGCGGCGGCGGCGGCGACCACCCTATGGTGTTCTTCATGCATGACATC
CTCGGCGGGACGAACCCGTCGGCGCGCATCGTGGCGGGCATCGTCGACAACACGGCCGTC
ACCGGCCAGCTCCCCTTCGCGCGGCCCAACGGCGCCGTGCTGCCGCTGAACAGCGGCGTC
AACGTCAAGAGCGGCGCGGCCGGCGCCATCGACAACAACAACATCCCCTTCCTCACCGGC
CTCGGCGGCGCCACCAACGCCGCCTTCACGTCGAACAGCAACAACAACAACAACGGCGTG
CCCGTCTTCGCCGGCGGCAGCCTCCCGCAGGGGACCACGCTCCAGAAGCTCCTCTTCGGG
ACCATGACGGTGGTCGACGACGAGCTGACGGAGGCGCCGGGGCTGGGCTCGCCGGCGGTG
GGCAGGGCGCAGGGGTTCTACATCGCGAGCTCCGAGGAGGGCGTGAGCCAGACGGTGGTG
GTGACGGCGATGTTCAAGGAAGGCGAGTTCGCCGACAGCATCAGCTTCTTCGGCGTGCAC
CGCACGGCGGACTCGGAGTCGCACCTCGCCGTCGTCGGCGGCACAGGGAAGTTCGCCGGT
GTGAAGGGATTCGCCAAGGTGGCCGTCGTGAGGCCCGGAGGTGTGGCGGCGACTGCCGCG
GAGCACGAGACGGACGGCGTCGAGACGGTGCTCCAGTTCACCGTGTTGCTCATCATGTAC
TAG

Peptide Sequence

PEP ID

Os01t0155300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2966314:2967346:1 gene:Os01g0155300 transcript:Os01t0155300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to dirigent-like protein. (Os01t0155300-00)
Sequence

MEFKKPTIGISSFLLLLLVSAAAAARPTRQLVANDGTVAAPAVAPAAADVAAGVADAPVA
AANADVPAAAAAMGPVAGAAAAGAPIGASTIPVAAGAGAVGMNGGGGGGDHPMVFFMHDI
LGGTNPSARIVAGIVDNTAVTGQLPFARPNGAVLPLNSGVNVKSGAAGAIDNNNIPFLTG
LGGATNAAFTSNSNNNNNGVPVFAGGSLPQGTTLQKLLFGTMTVVDDELTEAPGLGSPAV
GRAQGFYIASSEEGVSQTVVVTAMFKEGEFADSISFFGVHRTADSESHLAVVGGTGKFAG
VKGFAKVAVVRPGGVAATAAEHETDGVETVLQFTVLLIMY

Transcript Sequence

Transcript ID

Os01t0155300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2966314:2967346:1 gene:Os01g0155300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to dirigent-like protein. (Os01t0155300-00)
Sequence

GCTTGATCAAATGGAGTTCAAGAAGCCAACGATCGGGATCTCCTCCTTCCTCCTCCTGCT
CCTCGTGTCCGCCGCCGCCGCGGCAAGGCCGACGCGCCAGCTAGTCGCCAACGACGGCAC
CGTTGCCGCGCCCGCTGTCGCACCGGCCGCGGCGGACGTGGCGGCCGGTGTTGCCGATGC
GCCGGTGGCTGCTGCCAATGCCGACGTCCCGGCTGCTGCGGCAGCAATGGGCCCTGTGGC
TGGCGCGGCGGCGGCCGGAGCACCGATCGGCGCCAGCACCATCCCTGTGGCGGCGGGCGC
GGGCGCGGTGGGGATGAACGGCGGCGGCGGCGGCGGCGACCACCCTATGGTGTTCTTCAT
GCATGACATCCTCGGCGGGACGAACCCGTCGGCGCGCATCGTGGCGGGCATCGTCGACAA
CACGGCCGTCACCGGCCAGCTCCCCTTCGCGCGGCCCAACGGCGCCGTGCTGCCGCTGAA
CAGCGGCGTCAACGTCAAGAGCGGCGCGGCCGGCGCCATCGACAACAACAACATCCCCTT
CCTCACCGGCCTCGGCGGCGCCACCAACGCCGCCTTCACGTCGAACAGCAACAACAACAA
CAACGGCGTGCCCGTCTTCGCCGGCGGCAGCCTCCCGCAGGGGACCACGCTCCAGAAGCT
CCTCTTCGGGACCATGACGGTGGTCGACGACGAGCTGACGGAGGCGCCGGGGCTGGGCTC
GCCGGCGGTGGGCAGGGCGCAGGGGTTCTACATCGCGAGCTCCGAGGAGGGCGTGAGCCA
GACGGTGGTGGTGACGGCGATGTTCAAGGAAGGCGAGTTCGCCGACAGCATCAGCTTCTT
CGGCGTGCACCGCACGGCGGACTCGGAGTCGCACCTCGCCGTCGTCGGCGGCACAGGGAA
GTTCGCCGGTGTGAAGGGATTCGCCAAGGTGGCCGTCGTGAGGCCCGGAGGTGTGGCGGC
GACTGCCGCGGAGCACGAGACGGACGGCGTCGAGACGGTGCTCCAGTTCACCGTGTTGCT
CATCATGTACTAG