Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0154200-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2920425:2921321:-1 gene:Os01g0154200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154200-00)
Sequence

ATGGCCGGAAAAACATCTAAAGCTGCCACTCTAACCATGAAGCTGCTCGTCGACACCAAG
GCGCAGCGCGTGCTGTACGCGGAGGGCAGCAAGGACGTCGTCGACTTCCTCCTCTCCCTC
CTCGCTGTCCCGCTCGCCGGGGTCACCAAGCTGCTCACTGCCGGCGACATGGTCGGCTCC
GTCGGCAACCTCTACGGCAGCGTCGTTGACAAGCTCGGCGCCGACTACGCCTGCCGCGGC
GACGTCAAGGCCGCGCTGCTCGCGCCCACGGCCGCCCTCCGGTTGGGCTCGCCGGCGGAC
GCCGACAACGGCGGCGGCGCCCTTTACCGGTGCAGCGGCTGCGCCTGCTCGAGAAGCTGC
TACAACTTCGTGACCAAGGTGAACGGCACGCCGTGTCCGGTGTGCAAGAGGAAGATGGCG
ACCGAGGTGAGTCTTGTTGAGCCGGACGATGTCTCCGGCGCCGGCGCCAAGGTCGTGACG
TCGCCGGCGGCGCCGTCTGGCGAGGCAAGCTCTAGCAAGGCTGGTTACGCGCCGGGCAAG
GTGACGTACACGGTGATGGATGACCTCACCGTCGCGCCGTCGTCCACCGTCTCCGCCGTC
GCCGCCCTCGTGGCGCTTGGCGTGACGGACATCAGGGGACTGCAGGAGAAGACCGTCGAG
GTCGGCTACGACGAGGGTTTGGCTGTGCTGAAGGCTTCGTTGCAGTCAAAGACAGTGCTC
ACTGATGTCTTCCTCGGTGCGAGGCGGACTGCTCACCGACGTCATCCTATGCTGGTTTGA

Peptide Sequence

PEP ID

Os01t0154200-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2920425:2921321:-1 gene:Os01g0154200 transcript:Os01t0154200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154200-00)
Sequence

MAGKTSKAATLTMKLLVDTKAQRVLYAEGSKDVVDFLLSLLAVPLAGVTKLLTAGDMVGS
VGNLYGSVVDKLGADYACRGDVKAALLAPTAALRLGSPADADNGGGALYRCSGCACSRSC
YNFVTKVNGTPCPVCKRKMATEVSLVEPDDVSGAGAKVVTSPAAPSGEASSSKAGYAPGK
VTYTVMDDLTVAPSSTVSAVAALVALGVTDIRGLQEKTVEVGYDEGLAVLKASLQSKTVL
TDVFLGARRTAHRRHPMLV

Transcript Sequence

Transcript ID

Os01t0154200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2920425:2921321:-1 gene:Os01g0154200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154200-00)
Sequence

AGATGGCCGGAAAAACATCTAAAGCTGCCACTCTAACCATGAAGCTGCTCGTCGACACCA
AGGCGCAGCGCGTGCTGTACGCGGAGGGCAGCAAGGACGTCGTCGACTTCCTCCTCTCCC
TCCTCGCTGTCCCGCTCGCCGGGGTCACCAAGCTGCTCACTGCCGGCGACATGGTCGGCT
CCGTCGGCAACCTCTACGGCAGCGTCGTTGACAAGCTCGGCGCCGACTACGCCTGCCGCG
GCGACGTCAAGGCCGCGCTGCTCGCGCCCACGGCCGCCCTCCGGTTGGGCTCGCCGGCGG
ACGCCGACAACGGCGGCGGCGCCCTTTACCGGTGCAGCGGCTGCGCCTGCTCGAGAAGCT
GCTACAACTTCGTGACCAAGGTGAACGGCACGCCGTGTCCGGTGTGCAAGAGGAAGATGG
CGACCGAGGTGAGTCTTGTTGAGCCGGACGATGTCTCCGGCGCCGGCGCCAAGGTCGTGA
CGTCGCCGGCGGCGCCGTCTGGCGAGGCAAGCTCTAGCAAGGCTGGTTACGCGCCGGGCA
AGGTGACGTACACGGTGATGGATGACCTCACCGTCGCGCCGTCGTCCACCGTCTCCGCCG
TCGCCGCCCTCGTGGCGCTTGGCGTGACGGACATCAGGGGACTGCAGGAGAAGACCGTCG
AGGTCGGCTACGACGAGGGTTTGGCTGTGCTGAAGGCTTCGTTGCAGTCAAAGACAGTGC
TCACTGATGTCTTCCTCGGTGCGAGGCGGACTGCTCACCGACGTCATCCTATGCTGGTTT
GA