Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0154100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2907071:2907926:-1 gene:Os01g0154100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154100-00)
Sequence

ATGGCGACGGAGACAACCAGCTCGAAGGCGCTGAGCATGAAGCTGCTGGTGGACAGCAAG
GCGCAGCGCGTGCTGTACGCGGAGGCCGGCAAGGACGTCGTCGACTTCCTCTTCTCCCTC
CTCACCCTCCCCGTCGGCACCGTCGTCAAGGTTCTCTCCAAGGACTCCATGGTCGGCTCC
ATCGGCGAGCTGTACGCCAGCGTCGAGGACCTCGACGCCACCTACGTCCGCTCCGCCGAC
GCCAGGAACGTGCTGCTCGCGCCGGCCGGTGGCTTCGACACCGGCAAGCTCCTCCAGCTG
CCGGAGACGGCGGCGCCGCTGGCCACGAAACTTTACCGCTGCAGCTCGTGCGACTACAAC
GAGTGCTATGACTATGTTTCCACGGTGAGTGGCTTGCGTTGTCAGATCGCTCGATGCCCT
GGCAAGATGACGGTGGCAATGAAGCTTGTGGTGTCGAGCACGAGCACTACAGCTACCGGA
TCGGCCAGCGGCGGCGAGGCGGCGCAACCAGCATATGCTGTTGCCGGCACGGGATTTGTG
CAGGGGGTGGTGACGTACACGATCATGGATGACCTCAGGGTCGCGCCCATGTCCACCATC
TCCGGCATCACGCTGCTCACCACCTTCGGTGTTACTGACATCACCTCGCTCCAGGAGAAG
ACCGTGCAGATTGGCTACACTGAGGTAAAGTGCTACTATTTCTCTACGAGCAATGTGTAT
TGCTTGCAGTGCGTACTCTCATCTCTCTGTTCCGATCTGTTTGTCAATTTTGTACAACAC
TATTGCAGGGCTTGGCGATGCTGA

Peptide Sequence

PEP ID

Os01t0154100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2907071:2907926:-1 gene:Os01g0154100 transcript:Os01t0154100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154100-00)
Sequence

MATETTSSKALSMKLLVDSKAQRVLYAEAGKDVVDFLFSLLTLPVGTVVKVLSKDSMVGS
IGELYASVEDLDATYVRSADARNVLLAPAGGFDTGKLLQLPETAAPLATKLYRCSSCDYN
ECYDYVSTVSGLRCQIARCPGKMTVAMKLVVSSTSTTATGSASGGEAAQPAYAVAGTGFV
QGVVTYTIMDDLRVAPMSTISGITLLTTFGVTDITSLQEKTVQIGYTEVKCYYFSTSNVY
CLQCVLSSLCSDLFVNFVQHYCRAWRC

Transcript Sequence

Transcript ID

Os01t0154100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2907071:2907926:-1 gene:Os01g0154100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0154100-00)
Sequence

GCTACGATGGCGACGGAGACAACCAGCTCGAAGGCGCTGAGCATGAAGCTGCTGGTGGAC
AGCAAGGCGCAGCGCGTGCTGTACGCGGAGGCCGGCAAGGACGTCGTCGACTTCCTCTTC
TCCCTCCTCACCCTCCCCGTCGGCACCGTCGTCAAGGTTCTCTCCAAGGACTCCATGGTC
GGCTCCATCGGCGAGCTGTACGCCAGCGTCGAGGACCTCGACGCCACCTACGTCCGCTCC
GCCGACGCCAGGAACGTGCTGCTCGCGCCGGCCGGTGGCTTCGACACCGGCAAGCTCCTC
CAGCTGCCGGAGACGGCGGCGCCGCTGGCCACGAAACTTTACCGCTGCAGCTCGTGCGAC
TACAACGAGTGCTATGACTATGTTTCCACGGTGAGTGGCTTGCGTTGTCAGATCGCTCGA
TGCCCTGGCAAGATGACGGTGGCAATGAAGCTTGTGGTGTCGAGCACGAGCACTACAGCT
ACCGGATCGGCCAGCGGCGGCGAGGCGGCGCAACCAGCATATGCTGTTGCCGGCACGGGA
TTTGTGCAGGGGGTGGTGACGTACACGATCATGGATGACCTCAGGGTCGCGCCCATGTCC
ACCATCTCCGGCATCACGCTGCTCACCACCTTCGGTGTTACTGACATCACCTCGCTCCAG
GAGAAGACCGTGCAGATTGGCTACACTGAGGTAAAGTGCTACTATTTCTCTACGAGCAAT
GTGTATTGCTTGCAGTGCGTACTCTCATCTCTCTGTTCCGATCTGTTTGTCAATTTTGTA
CAACACTATTGCAGGGCTTGGCGATGCTGAAGGCGTCGCTGCAGTCGAAGACGGTGCTCA
CAGATGTCTTCCTTGG