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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0153500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2885392:2886301:1 gene:Os01g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0153500-00)
Sequence

ATGGCAGCCTCCACCACCGCGCTGAGCATGAAGCTGCTCGTCGACACCAATGCCCAGCGA
GTGCTGTTCGCGGAGGCGAGCAAGGATGTCGTCGACTTCCTCTTCTCCCTCCTGGCGCTG
CCGGTCGGCACGGCCGTCAAGCTGCTCGGGAAGGACTCCATGGTCGGCTGCGTCGGCAAC
CTCTACGCCAGCGTCGAGAAGCTCGACGGCACCTACGTCCAGCCCGGCGCCTCCAAGAAC
GCGCTGCTCAGCCCCGTCGTGCTCTCGCCGGCGGCCAGCTCCAACACCTCCGTCCTCCGC
TTGCCGGCCCCGTCTTCTTCGCAGCCCAAGAGCTTCTTCAGCTGCCGCTCCTACGACTGT
TTCTACTACGTGACGGACGTGAGCGGCGTCAAGTGTCCGTCCTGCGGCAACCAGATGACA
ACGGCATGCACGTATGCCGCACCAACCGCTGCCCAGAAGCTGCAGGCCGCTGCAGCCGAA
GGGGCGGGGAAGGGGTTCGTGCAGGGCATCGTGACGTACACGGTGATGGACGACCTCACC
GTGTCGCCCATGTCGTCCATCTCCAGCATCACGCTGCTCAACACGTTCGCCGTCAAGGAC
CTGGGCGCGCTCAAGGAGCAGACCGTGCAGCTCGGCTACACTGAGGGCCTGGCGATCCTG
AGGGCCTCGCTGCAGTCCAAGACCGTTCTCAGCGACGTTTTCCTTGCCAGGAGGCCTGCA
AAGCAAGCCTGA

Peptide Sequence

PEP ID

Os01t0153500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2885392:2886301:1 gene:Os01g0153500 transcript:Os01t0153500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0153500-00)
Sequence

MAASTTALSMKLLVDTNAQRVLFAEASKDVVDFLFSLLALPVGTAVKLLGKDSMVGCVGN
LYASVEKLDGTYVQPGASKNALLSPVVLSPAASSNTSVLRLPAPSSSQPKSFFSCRSYDC
FYYVTDVSGVKCPSCGNQMTTACTYAAPTAAQKLQAAAAEGAGKGFVQGIVTYTVMDDLT
VSPMSSISSITLLNTFAVKDLGALKEQTVQLGYTEGLAILRASLQSKTVLSDVFLARRPA
KQA

Transcript Sequence

Transcript ID

Os01t0153500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2885392:2886301:1 gene:Os01g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF674 domain containing protein. (Os01t0153500-00)
Sequence

AGGCGGAGAAAAGCAGTTGGCAAAGCTCGCGCAATGGCAGCCTCCACCACCGCGCTGAGC
ATGAAGCTGCTCGTCGACACCAATGCCCAGCGAGTGCTGTTCGCGGAGGCGAGCAAGGAT
GTCGTCGACTTCCTCTTCTCCCTCCTGGCGCTGCCGGTCGGCACGGCCGTCAAGCTGCTC
GGGAAGGACTCCATGGTCGGCTGCGTCGGCAACCTCTACGCCAGCGTCGAGAAGCTCGAC
GGCACCTACGTCCAGCCCGGCGCCTCCAAGAACGCGCTGCTCAGCCCCGTCGTGCTCTCG
CCGGCGGCCAGCTCCAACACCTCCGTCCTCCGCTTGCCGGCCCCGTCTTCTTCGCAGCCC
AAGAGCTTCTTCAGCTGCCGCTCCTACGACTGTTTCTACTACGTGACGGACGTGAGCGGC
GTCAAGTGTCCGTCCTGCGGCAACCAGATGACAACGGCATGCACGTATGCCGCACCAACC
GCTGCCCAGAAGCTGCAGGCCGCTGCAGCCGAAGGGGCGGGGAAGGGGTTCGTGCAGGGC
ATCGTGACGTACACGGTGATGGACGACCTCACCGTGTCGCCCATGTCGTCCATCTCCAGC
ATCACGCTGCTCAACACGTTCGCCGTCAAGGACCTGGGCGCGCTCAAGGAGCAGACCGTG
CAGCTCGGCTACACTGAGGGCCTGGCGATCCTGAGGGCCTCGCTGCAGTCCAAGACCGTT
CTCAGCGACGTTTTCCTTGCCAGGAGGCCTGCAAAGCAAGCCTGA