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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0153300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2872115:2872826:1 gene:Os01g0153300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.5 description:Similar to Histone H2B.1. (Os01t0153300-00)
Sequence

ATGGCGCCCAAGGCGGAGAAGAAGCCGGCCGCGAAGAAGCCCGCGGAGGAGGAGCCCGCG
GCGGAGAAGGCCGAGAAGGCCCCGGCCGGGAAGAAGCCCAAGGCGGAGAAGCGGCTCCCC
GCCGGCAAGGGCGAGAAGGGCTCCGGCGAGGGGAAGAAGGACCGCGCTGGGAGGAAGAAG
GCGAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCAC
CCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATC
TTCGAGAAGCTCGCCGCCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATC
ACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCAC
GCCGTCTCCGAGGGCACCAAGGCTGTGACCAAGTTCACCTCCGCTTAG

Peptide Sequence

PEP ID

Os01t0153300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2872115:2872826:1 gene:Os01g0153300 transcript:Os01t0153300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.5 description:Similar to Histone H2B.1. (Os01t0153300-00)
Sequence

MAPKAEKKPAAKKPAEEEPAAEKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKDRAGRKK
AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTI
TSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA

Transcript Sequence

Transcript ID

Os01t0153300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2872115:2872826:1 gene:Os01g0153300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.5 description:Similar to Histone H2B.1. (Os01t0153300-00)
Sequence

CAAATCTTGCGATCCACACACAGCAAAAGAACCACCACCGTTTCCCCTTCCCGAGAAGAA
GAGAGCAGCATCCATGGCGCCCAAGGCGGAGAAGAAGCCGGCCGCGAAGAAGCCCGCGGA
GGAGGAGCCCGCGGCGGAGAAGGCCGAGAAGGCCCCGGCCGGGAAGAAGCCCAAGGCGGA
GAAGCGGCTCCCCGCCGGCAAGGGCGAGAAGGGCTCCGGCGAGGGGAAGAAGGACCGCGC
TGGGAGGAAGAAGGCGAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCT
CAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTT
CATCAACGACATCTTCGAGAAGCTCGCCGCCGAGGCCGCCAAGCTCGCCCGCTACAACAA
GAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGA
GCTTGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCTGTGACCAAGTTCACCTCCGCTTA
GGCTCATAGGCCCCTTTCTCGTCTTGCTGCTAATGGTAGTTGTGGTAGGTTGGAATTTTG
GATGGTATGGTACTGTGCTGTAGTTATTCTGGCTTTTGACTATCTTGGGTTCATGTAAGA
AATATCCTGGTGGATTTAGGACAATATTGTTATCTGGATCTGGTAAAGTAGT