Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0153100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2857382:2858128:-1 gene:Os01g0153100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 2 description:Similar to Histone H2B-3 (Fragment). (Os01t0153100-00)
Sequence

ATGGCGCCCAAGGCGGAGAAGAAGCCGGCCGCGAAGAAGCCCGCGGAGGAGGAGCCCGCG
GCGGAGAAGGCCGAGAAGGCCCCGGCGGGGAAGAAGCCCAAGGCGGAGAAGCGTCTCCCC
GCCGGCAAGGGCGAGAAGGGCAGCGGCGAGGGGAAGAAGGCGGGGCGGAAGAAGGGGAAG
AAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCACCCCGAC
ATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAG
AAGCTCGCCGCCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCC
CGGGAGATCCAGACCGCCGTCCGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTC
TCCGAGGGCACCAAGGCCGTCACCAAGTTCACTTCCTCTTAG

Peptide Sequence

PEP ID

Os01t0153100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2857382:2858128:-1 gene:Os01g0153100 transcript:Os01t0153100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 2 description:Similar to Histone H2B-3 (Fragment). (Os01t0153100-00)
Sequence

MAPKAEKKPAAKKPAEEEPAAEKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKAGRKKGK
KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITS
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Transcript Sequence

Transcript ID

Os01t0153100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2857382:2858128:-1 gene:Os01g0153100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 2 description:Similar to Histone H2B-3 (Fragment). (Os01t0153100-00)
Sequence

GCAGTCTTGCAAACACACGCAGCAAAATCCACACCGCTTCCCCTCCCCGAGAAGAAGAGA
GCAGCATCCATGGCGCCCAAGGCGGAGAAGAAGCCGGCCGCGAAGAAGCCCGCGGAGGAG
GAGCCCGCGGCGGAGAAGGCCGAGAAGGCCCCGGCGGGGAAGAAGCCCAAGGCGGAGAAG
CGTCTCCCCGCCGGCAAGGGCGAGAAGGGCAGCGGCGAGGGGAAGAAGGCGGGGCGGAAG
AAGGGGAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTC
CACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGAC
ATCTTCGAGAAGCTCGCCGCCGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACC
ATCACCTCCCGGGAGATCCAGACCGCCGTCCGCCTCGTCCTCCCCGGCGAGCTTGCCAAG
CACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACTTCCTCTTAGGCTGCACCT
GGTGCTATTGTGCTAGTAGTAATATTAGTTTGATCTATTTATCTACTAGCTGTAGTGCAT
CAATGATGGGAAATGGATGTTGGGGATTTAGTGACTGTAAGAAGAATTAGGTGGGGCTGC
TTTTGAGGAACTTCTGTTTCATGGATTCGAAATACACTAGTAATGCTTTTGTATCATGTG
AATATGTGATCTCTCCTATGTTGTCTT