Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0152000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:2810313:2815017:1 gene:Os01g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0152000-01)
Sequence	ATGGCGATGGCTCTTGCTAGCTTCCTGCTGCTGCTGCTGTCCGTCTTCATGTCCATCTTC TTGCACTTCATGGCAGTGCGAGGAGCAGACGGAGAAGACGCCGCAGCGTTGCTCGCTTTC AAGGCCGTGGCGGTGGGCAACGGTGGTGGCAACGGCGTGCTTGCGTCGTGGAACGGCAGC GCCGGGCCGTGCAGCTGGGAGGGCGTGGCGTGTGGCCGGCACGGGCGGGTGGTGGCGCTT AGCCTGCCCGGCCATGATCTCTCGGGGACCCTGTCGCCGGCCGTCGGCAACCTGACGTCG TTGCGGAAACTTGACCTGAGTTACAACTGGCTGCACGGTGGCATCCCCGCGAGCCTCGGT CAGCTGCACCGCCTCAGGGAACTCGACCTAAGCTTCAACACCTTCTCCGGCGAGGTCCCC AGCAATCTGACATCCTGCACCAGCTTGGAATACCTGGCCCTCGGCAGCAACAAGCTCGCC GGGCACATACCTTCGGAGCTCGGCAACACGCTGACACAGCTCCAGGTGCTAGGCCTCGAC AACAACAGCTTCGTCGGCCATTGGCCAGCTTCACTGGCCAATCTGACGTCCCTGGGATAC CTCAGCCTCAGGATGAACAGTCTCGAGGGCACAATACCTCCTGAATTCGGCAGCAACATG CCGCGCCTTTACTTCCTCGACATCTGCTCCAACAACCTGAGTGGTGCACTCCCGTCTTCC CTGTACAATCTGTCGTCGCTAATGGGGTTTGATGCAGGAAACAACAAGCTGGATGGAAGC ATTGCTACTGATATCGATGAAAAGTTTCCTCATTTACAGTCTTTCGCAGTGTTCAACAAC CAGTTCAGCGGGGAAATTCCCTCCTCGTTCTCCAATCTCACTAACCTCACGAGTCTGCAG CTATCAATGAACGGATTTAGTGGGTTTGTGCCACATAATCTAGGGAGGTTGAATGCTCTG CAGAATCTGCAACTAGGTGTTAATATGCTTGAAGCAGGGGACATAAAGGGGTGGGAATTT GTTGAGTCATTGACAAACTGCAGTAAGCTAGAGATTTTAGTTCTCAGTAACAACAATTTC ACTGGGCAGTTCCCTATTTCGATCGCAAACCTCTCGAAGACTCTCCAAAAACTTTACTTG GGTGGCAGTAGGATTTCTGGAAGCATCCCCTCTGATTTCGGTAATTTGGTTGGTCTAAGA TCATTATACCTGTTTAGTACTGACATATCAGGTGTAATTCCAGAGAGCATTGGGAAGCTG GAAAACTTGACTACGCTATACCTGAATAACAATAGCTTGTCTGGCCATGTACCGTCTTCT GTAGGAAACCTTACCAATCTGATGAAGCTATTCATGCAAGGCAACAACTTGGAAGGACCA ATCCCAGCGAATCTTGGTAAGCTGAAAAGCCTGAATGTTCTTGATTTATCAAGAAATCAC TTCAATGGTTCGATTCCAAAGGAAATATTGGAGCTGCCTTCCATTTCACAGTACTTGAAT TTATCATACAACTCCCTCTCTGGACCCCTTCCTTCTGAAGTTGGGAGTTTGACTAGCCTC AACGAGTTGATTCTGTCAGGAAACCAATTGTCTGGCCAGATACCAAGTAGTATAAAAAAT TGCATAGTGCTCACTGTACTTTTATTGGACAGTAACTCGTTCCAAGGAACTATACCTGTG TTTCTGGGGGACATTAAGGGGCTCCGTGTACTTAACCTAACCATGAACAAGTTTTCTGGT GTGATTCCTGATGCCCTTGGTAGCATCCACAACCTGCAAGAGTTGTATCTAGCGTATAAC AACTTGTCTGGGCCTATCCCAGCAGTGCTGCAGAATTTGACATCGTTATCAATGCTGGAT CTATCCTTCAATGATCTGCAAGGTGAAGTGCCAAAAGAAGGTATTTTTAAGAACTTATCT TACTTGTCTTTAGCTGGAAACAGTGAGCTTTGTGGGGGAATATCTCATCTTAACTTACCT CCATGCTCCATGCATGCTGTTAGAAAGAGAAGCAAAGGGTGGTTAAGGTCTCTTAAAATA GCTCTGGCATCAATAGCTGTGGTCTTGTTCTTAGCTCTAGTTATGGTGATTATTATGTTA ATTCGTCGTAGAAAGCCTGTACATAGGAAGAAGGGCCAGTCCCTAACCCCAGTTGTGGAG GAACAATTTGAAAGAGTTTCTTACCAGGAATTGTCAAATGGAACCAAGGGATTTTCACAG AACAGTTTGCTTGGAAAAGGAAGCTATGGTGTAGTCTATAAATGCACTTTGTTTGATGAG GAAATTGTTGTCGCTGTAAAGGTGTTTAACCTTGAACGGTCTGGATCTACTAGAAGTTTT CTGGCAGAATGCGACGCACTGAGAAGTGTGCGCCACCGTTGTCTCCTAAAGATCATCACT TGCTGTTCAAGCATAAATAACCAAGGTCAAGATTTCAAGGCACTAGTTTTTGAGTTTATG CCCAATGGCAGCTTAAATGGTTGGCTTCATCCAAAATCTGATATGCCCATTGCTGACAAT ACTTTGAGCCTAACTCAAAGGCTGGACATTGCTGTTGATATTGTGGATGCTCTGGAATAT CTTCATATCCACTGCCAGCCGCCGATCGTTCATTGTGATCTCAAGCCAAGCAACATCCTT CTTGCAGAAGACATGAGTGCCCGAGTTGGAGATTTCGGCATATCAAGAATCCTAACTGAA AGCGCGAGCAAAACACAGCAAAATTCAAGCAACACAATCGGAATAAGAGGTTCCATTGGC TATGTTGCTCCAGAGTATGGGGAAGGCTCTGCGGTCTCAACTCTTGGCGATGTTTATAGT CTGGGCATATTGCTGCTTGAGATGTTTACAGGAATGAGCCCAACAGACGATATGTTCAGA GATTCCTTGGACCTGCACAGTTTCTCAGAGGCTGCTCATCCTGACAGAATCCTGGAGATA GCCGATCCGACGCTCTGGGTGCATGTAGACGCCGAGGATAGCATCACAAGAAGCAGAATG CAAGAGTGTTTGATTTCAGTCATTGGCCTCGGCTTGTCCTGCTCAAAGCATCAACCCAAA GAGCGAATGCCAATACAAGATGCAGCCCTGAAGATGCATGCGATCAGAGACGACGCTTAC CTGATGTTTTCTGGCTCTCTTTCAGTGGACATGGAAGAGGAGACGAAACAAATTAGCAGC GATTTGAAGCAACAGTGA

Peptide Sequence

PEP ID	Os01t0152000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:2810313:2815017:1 gene:Os01g0152000 transcript:Os01t0152000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0152000-01)
Sequence	MAMALASFLLLLLSVFMSIFLHFMAVRGADGEDAAALLAFKAVAVGNGGGNGVLASWNGS AGPCSWEGVACGRHGRVVALSLPGHDLSGTLSPAVGNLTSLRKLDLSYNWLHGGIPASLG QLHRLRELDLSFNTFSGEVPSNLTSCTSLEYLALGSNKLAGHIPSELGNTLTQLQVLGLD NNSFVGHWPASLANLTSLGYLSLRMNSLEGTIPPEFGSNMPRLYFLDICSNNLSGALPSS LYNLSSLMGFDAGNNKLDGSIATDIDEKFPHLQSFAVFNNQFSGEIPSSFSNLTNLTSLQ LSMNGFSGFVPHNLGRLNALQNLQLGVNMLEAGDIKGWEFVESLTNCSKLEILVLSNNNF TGQFPISIANLSKTLQKLYLGGSRISGSIPSDFGNLVGLRSLYLFSTDISGVIPESIGKL ENLTTLYLNNNSLSGHVPSSVGNLTNLMKLFMQGNNLEGPIPANLGKLKSLNVLDLSRNH FNGSIPKEILELPSISQYLNLSYNSLSGPLPSEVGSLTSLNELILSGNQLSGQIPSSIKN CIVLTVLLLDSNSFQGTIPVFLGDIKGLRVLNLTMNKFSGVIPDALGSIHNLQELYLAYN NLSGPIPAVLQNLTSLSMLDLSFNDLQGEVPKEGIFKNLSYLSLAGNSELCGGISHLNLP PCSMHAVRKRSKGWLRSLKIALASIAVVLFLALVMVIIMLIRRRKPVHRKKGQSLTPVVE EQFERVSYQELSNGTKGFSQNSLLGKGSYGVVYKCTLFDEEIVVAVKVFNLERSGSTRSF LAECDALRSVRHRCLLKIITCCSSINNQGQDFKALVFEFMPNGSLNGWLHPKSDMPIADN TLSLTQRLDIAVDIVDALEYLHIHCQPPIVHCDLKPSNILLAEDMSARVGDFGISRILTE SASKTQQNSSNTIGIRGSIGYVAPEYGEGSAVSTLGDVYSLGILLLEMFTGMSPTDDMFR DSLDLHSFSEAAHPDRILEIADPTLWVHVDAEDSITRSRMQECLISVIGLGLSCSKHQPK ERMPIQDAALKMHAIRDDAYLMFSGSLSVDMEEETKQISSDLKQQ

Transcript Sequence

Transcript ID	Os01t0152000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2810313:2815017:1 gene:Os01g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0152000-01)
Sequence	TTGGACAGATCGCTCACGCGCGCGCTTCCGCCGGGGTCTCGTGCTCACCTCCGGGCACCG CCTCGCCGCCGCCGCCGGAATGCGCCGTCACTGGAAGCCGTGCTCAGCTCCGACGCGTAC GATGCCCAATCCTGTATACTTTTTCTTCTTCGAGACTCCCGTCGCTGTAGCCACAACAAT TCTCCAGAGACTCGGAGTTCTCAGTCTGCGCCCGTTACCTGTTCGACAGAACTCCTCCGA GGAGCTTACTGTCCCTGGCCCTTTGACTAAGGAGGCTCGGTGTTGTTCGTTTTTGTGCTC GTCAACTGTAGTTGTCCATGCTTTCACGGAAGCTCTACACAAGCTGAATCTAATCCTGGA TCACCACAAGACTTTTACCTTTCCTCGTGTGTCTGGAACTCCGCATACAAGCGTGGAAAA GGGTGGCCGTACAACTGTACAAGGTAACACTCTGGACTGCCAACCTAATGGATTCTCTGT TGGAATCAGTCAGGAAGAAATTATCAGGAATTTGGTCGAACAGAGAAGGGGTGAGGACAT AATTGGAGCGAGCTAAGTCATGTGTGAGGGCCGAGGGCGACAGCGACGAGAGCTTGGATG CGTCCAAGCTTTCCATATCCTTCCAGTACTATGTTACAGTAAGTATCTAGTTGGGAAATG ATGTGGAAAGGAATGGCGGGAACAGTCAAAAAGGTAACATGCACTGCTCCAAGTCGACAT GGTATCTTACCACTCCTGTCTCTCTCCCTGTGAGCGCGGAGACCGCTAAACAAGTCAAGA TTTTGACTCGGTGTCCTCGCCGTCTCGCCAATGGCACTCTGGGATCATGGCGTCGTGGGG TTAAAATACGGTGCTCTGGGGCACTGCTTGTCACTCCACTTGTGTACCTTGCAAGTTTGC AACCACCATGGCGATGGCTCTTGCTAGCTTCCTGCTGCTGCTGCTGTCCGTCTTCATGTC CATCTTCTTGCACTTCATGGCAGTGCGAGGAGCAGACGGAGAAGACGCCGCAGCGTTGCT CGCTTTCAAGGCCGTGGCGGTGGGCAACGGTGGTGGCAACGGCGTGCTTGCGTCGTGGAA CGGCAGCGCCGGGCCGTGCAGCTGGGAGGGCGTGGCGTGTGGCCGGCACGGGCGGGTGGT GGCGCTTAGCCTGCCCGGCCATGATCTCTCGGGGACCCTGTCGCCGGCCGTCGGCAACCT GACGTCGTTGCGGAAACTTGACCTGAGTTACAACTGGCTGCACGGTGGCATCCCCGCGAG CCTCGGTCAGCTGCACCGCCTCAGGGAACTCGACCTAAGCTTCAACACCTTCTCCGGCGA GGTCCCCAGCAATCTGACATCCTGCACCAGCTTGGAATACCTGGCCCTCGGCAGCAACAA GCTCGCCGGGCACATACCTTCGGAGCTCGGCAACACGCTGACACAGCTCCAGGTGCTAGG CCTCGACAACAACAGCTTCGTCGGCCATTGGCCAGCTTCACTGGCCAATCTGACGTCCCT GGGATACCTCAGCCTCAGGATGAACAGTCTCGAGGGCACAATACCTCCTGAATTCGGCAG CAACATGCCGCGCCTTTACTTCCTCGACATCTGCTCCAACAACCTGAGTGGTGCACTCCC GTCTTCCCTGTACAATCTGTCGTCGCTAATGGGGTTTGATGCAGGAAACAACAAGCTGGA TGGAAGCATTGCTACTGATATCGATGAAAAGTTTCCTCATTTACAGTCTTTCGCAGTGTT CAACAACCAGTTCAGCGGGGAAATTCCCTCCTCGTTCTCCAATCTCACTAACCTCACGAG TCTGCAGCTATCAATGAACGGATTTAGTGGGTTTGTGCCACATAATCTAGGGAGGTTGAA TGCTCTGCAGAATCTGCAACTAGGTGTTAATATGCTTGAAGCAGGGGACATAAAGGGGTG GGAATTTGTTGAGTCATTGACAAACTGCAGTAAGCTAGAGATTTTAGTTCTCAGTAACAA CAATTTCACTGGGCAGTTCCCTATTTCGATCGCAAACCTCTCGAAGACTCTCCAAAAACT TTACTTGGGTGGCAGTAGGATTTCTGGAAGCATCCCCTCTGATTTCGGTAATTTGGTTGG TCTAAGATCATTATACCTGTTTAGTACTGACATATCAGGTGTAATTCCAGAGAGCATTGG GAAGCTGGAAAACTTGACTACGCTATACCTGAATAACAATAGCTTGTCTGGCCATGTACC GTCTTCTGTAGGAAACCTTACCAATCTGATGAAGCTATTCATGCAAGGCAACAACTTGGA AGGACCAATCCCAGCGAATCTTGGTAAGCTGAAAAGCCTGAATGTTCTTGATTTATCAAG AAATCACTTCAATGGTTCGATTCCAAAGGAAATATTGGAGCTGCCTTCCATTTCACAGTA CTTGAATTTATCATACAACTCCCTCTCTGGACCCCTTCCTTCTGAAGTTGGGAGTTTGAC TAGCCTCAACGAGTTGATTCTGTCAGGAAACCAATTGTCTGGCCAGATACCAAGTAGTAT AAAAAATTGCATAGTGCTCACTGTACTTTTATTGGACAGTAACTCGTTCCAAGGAACTAT ACCTGTGTTTCTGGGGGACATTAAGGGGCTCCGTGTACTTAACCTAACCATGAACAAGTT TTCTGGTGTGATTCCTGATGCCCTTGGTAGCATCCACAACCTGCAAGAGTTGTATCTAGC GTATAACAACTTGTCTGGGCCTATCCCAGCAGTGCTGCAGAATTTGACATCGTTATCAAT GCTGGATCTATCCTTCAATGATCTGCAAGGTGAAGTGCCAAAAGAAGGTATTTTTAAGAA CTTATCTTACTTGTCTTTAGCTGGAAACAGTGAGCTTTGTGGGGGAATATCTCATCTTAA CTTACCTCCATGCTCCATGCATGCTGTTAGAAAGAGAAGCAAAGGGTGGTTAAGGTCTCT TAAAATAGCTCTGGCATCAATAGCTGTGGTCTTGTTCTTAGCTCTAGTTATGGTGATTAT TATGTTAATTCGTCGTAGAAAGCCTGTACATAGGAAGAAGGGCCAGTCCCTAACCCCAGT TGTGGAGGAACAATTTGAAAGAGTTTCTTACCAGGAATTGTCAAATGGAACCAAGGGATT TTCACAGAACAGTTTGCTTGGAAAAGGAAGCTATGGTGTAGTCTATAAATGCACTTTGTT TGATGAGGAAATTGTTGTCGCTGTAAAGGTGTTTAACCTTGAACGGTCTGGATCTACTAG AAGTTTTCTGGCAGAATGCGACGCACTGAGAAGTGTGCGCCACCGTTGTCTCCTAAAGAT CATCACTTGCTGTTCAAGCATAAATAACCAAGGTCAAGATTTCAAGGCACTAGTTTTTGA GTTTATGCCCAATGGCAGCTTAAATGGTTGGCTTCATCCAAAATCTGATATGCCCATTGC TGACAATACTTTGAGCCTAACTCAAAGGCTGGACATTGCTGTTGATATTGTGGATGCTCT GGAATATCTTCATATCCACTGCCAGCCGCCGATCGTTCATTGTGATCTCAAGCCAAGCAA CATCCTTCTTGCAGAAGACATGAGTGCCCGAGTTGGAGATTTCGGCATATCAAGAATCCT AACTGAAAGCGCGAGCAAAACACAGCAAAATTCAAGCAACACAATCGGAATAAGAGGTTC CATTGGCTATGTTGCTCCAGAGTATGGGGAAGGCTCTGCGGTCTCAACTCTTGGCGATGT TTATAGTCTGGGCATATTGCTGCTTGAGATGTTTACAGGAATGAGCCCAACAGACGATAT GTTCAGAGATTCCTTGGACCTGCACAGTTTCTCAGAGGCTGCTCATCCTGACAGAATCCT GGAGATAGCCGATCCGACGCTCTGGGTGCATGTAGACGCCGAGGATAGCATCACAAGAAG CAGAATGCAAGAGTGTTTGATTTCAGTCATTGGCCTCGGCTTGTCCTGCTCAAAGCATCA ACCCAAAGAGCGAATGCCAATACAAGATGCAGCCCTGAAGATGCATGCGATCAGAGACGA CGCTTACCTGATGTTTTCTGGCTCTCTTTCAGTGGACATGGAAGAGGAGACGAAACAAAT TAGCAGCGATTTGAAGCAACAGTGAGTAACTAGGCCTGAAGAGTGTACAAGAATAAGATA TGCTTGCTGGGGAAAATGTTTTAACAGCTCAGCTGCCGATGGCGACTTGCCAGAATTCCG AGAAACAAAAGCTGAGACGCTGAAGATGTAGCATTTTCCTTCGTGGTTCATATCAGTCAG TCTTTATTTGCGTCAGTTCATATGGCTATATGTAATGTAAGCTAATAGAACGTTCAGTAA CTGCCGATGTGTACATTACAACCAATACGGCAATACTACTATGTGGAGAACTGTCAGAAA GATTTTTGACTGTTCATCCTTTTCGTACAAAATGAAAATTCAAATCATACCTGTAATCAC ACATGAAAATCAGATTATGAGATTGCGCCACGTTTTTGTGGGACG