Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0151200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:2770142:2774161:1 gene:Os01g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inner membrane protein ALBINO3, chloroplast precursor. Splice isoform 2. (Os01t0151200-01);Similar to inner membrane protein ALBINO3. (Os01t0151200-02);Similar to inner membrane protein ALBINO3. (Os01t0151200-03)
Sequence	ATGGCCAAGGCGCTCCTCTCCTCGTCGCTGCTCCCCTCGCTGCAGCCCCGCGCCGCCGCC GCGAGGCTGCCTATGCTGACGCTGCCTTCGCTGCGGAGGCACGGGGGCCGCCGCGCGTCG GCGTGCAGGGTGAGGGCGAGCCTCCACGGGCTCGACTCGATCGCGGGGCTCGACCTCCAC GCCGCGCTGGAGCGCGCCGAGGCGGCGCTCTACACGCTCGCCGACGCCGCTGTCGTCGCG GCGGACGCGGCGGCGGGAGGAGGAGGGGGTGGCGGTGGTGGTGGCGGTGAAGCGGCGGCG TCGGTGGCGCAGAAGAACGGGGGGTGGTTCGGGTTCATCTCCGAGGCCTTGGAGGTCGTG CTTAAGGTGCTGAAGGATGGCCTGTCAGCTGTTCATGTGCCGTACTCTTATGGATTCGCC ATCATTCTTCTCACTGTTATTGTGAAGGCTGCAACATTACCTTTAACGAAACAACAGGTC GAATCAACTCTGGCTATGCAGAATTTACAGCCACAGATCAAAGCAATTCAACAGAGATAT GCAGGAAATCAGGAAAGGATACAGCTTGAGACTGCTCGGTTATACAAGCAAGCTGGAGTC AACCCTCTGGCAGGATGTTTTCCAACTTTGGCAACAATACCTGTCTGGATTGGCCTCTAC CAAGCCCTTTCAAATGTAGCAAACGAGGGATTACTGACAGAAGGATTTTTCTGGATTCCA TCTTTGGGAGGCCCTACAACAATTGCTGCTCGGCAAAGTGGTGCTGGCATTTCTTGGCTC TTGCCTTTTGTGGATGGCCATCCTCCATTAGGCTGGCATGACACGATATGTTATCTTGTG TTGCCTGTGCTACTTGTTGCTTCTCAGTTTGTCTCTATGGAAATCATGAAGCCACCCCAG ACTGATGATCCATCGCAGAAGAACACACTGCTTGTTTTGAAATTTCTTCCATTTATGATA GGGTGGTTCTCTTTGTCAGTGCCGTCAGGGTTGTCCATTTATTGGTTCACAAATAATATC CTCAGCACAGCCCAGCAAGTTTGGTTACGGAAACTGGGAGGAGCAAAGCCTGTTGTCAAT CAGGGGGGTAGTGGGATAATTACTGCAGGACGAGCAAAACGTACGAGTGCTCAACCAGCC CAACCTGGTGAAAGATTTAAACAGCTGAAAGAAGAGGAGAGCAAGAGAAAAGGCAACAAA GCGCTTGCTGCAGGAGATTCAGATCTTTCAGCCTCAACATCAGAGGATGAAGAGTCGGAT GATGAGACTACTGAAGAGGGAGGACCTGAGGAAAGATACAATTCCAGTAGCAACAAGAAA CTTCCAAATTACTCCGGAAAGAAGGGCAAAAGATCAAAGAGGAAGCGCATGGTTCAGTAG

Peptide Sequence

PEP ID	Os01t0151200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:2770142:2774161:1 gene:Os01g0151200 transcript:Os01t0151200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inner membrane protein ALBINO3, chloroplast precursor. Splice isoform 2. (Os01t0151200-01);Similar to inner membrane protein ALBINO3. (Os01t0151200-02);Similar to inner membrane protein ALBINO3. (Os01t0151200-03)
Sequence	MAKALLSSSLLPSLQPRAAAARLPMLTLPSLRRHGGRRASACRVRASLHGLDSIAGLDLH AALERAEAALYTLADAAVVAADAAAGGGGGGGGGGGEAAASVAQKNGGWFGFISEALEVV LKVLKDGLSAVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPQIKAIQQRY AGNQERIQLETARLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIP SLGGPTTIAARQSGAGISWLLPFVDGHPPLGWHDTICYLVLPVLLVASQFVSMEIMKPPQ TDDPSQKNTLLVLKFLPFMIGWFSLSVPSGLSIYWFTNNILSTAQQVWLRKLGGAKPVVN QGGSGIITAGRAKRTSAQPAQPGERFKQLKEEESKRKGNKALAAGDSDLSASTSEDEESD DETTEEGGPEERYNSSSNKKLPNYSGKKGKRSKRKRMVQ

Transcript Sequence

Transcript ID	Os01t0151200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2770142:2774161:1 gene:Os01g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inner membrane protein ALBINO3, chloroplast precursor. Splice isoform 2. (Os01t0151200-01);Similar to inner membrane protein ALBINO3. (Os01t0151200-02);Similar to inner membrane protein ALBINO3. (Os01t0151200-03)
Sequence	CGACTACCTCTTCTTCCTCCTCTCGCACCACCACCACTCACCACCCCCCACCCCCCACCT CCACCCTCCTCCTCCTCCTCCGCCTCGGCGTTCGTGCATGAAACCCTAGACCCCCCCCCC CTCTAAACCCCCCTCCCTCCCGCACCCCCCGCGATGGCCAAGGCGCTCCTCTCCTCGTCG CTGCTCCCCTCGCTGCAGCCCCGCGCCGCCGCCGCGAGGCTGCCTATGCTGACGCTGCCT TCGCTGCGGAGGCACGGGGGCCGCCGCGCGTCGGCGTGCAGGGTGAGGGCGAGCCTCCAC GGGCTCGACTCGATCGCGGGGCTCGACCTCCACGCCGCGCTGGAGCGCGCCGAGGCGGCG CTCTACACGCTCGCCGACGCCGCTGTCGTCGCGGCGGACGCGGCGGCGGGAGGAGGAGGG GGTGGCGGTGGTGGTGGCGGTGAAGCGGCGGCGTCGGTGGCGCAGAAGAACGGGGGGTGG TTCGGGTTCATCTCCGAGGCCTTGGAGGTCGTGCTTAAGGTGCTGAAGGATGGCCTGTCA GCTGTTCATGTGCCGTACTCTTATGGATTCGCCATCATTCTTCTCACTGTTATTGTGAAG GCTGCAACATTACCTTTAACGAAACAACAGGTCGAATCAACTCTGGCTATGCAGAATTTA CAGCCACAGATCAAAGCAATTCAACAGAGATATGCAGGAAATCAGGAAAGGATACAGCTT GAGACTGCTCGGTTATACAAGCAAGCTGGAGTCAACCCTCTGGCAGGATGTTTTCCAACT TTGGCAACAATACCTGTCTGGATTGGCCTCTACCAAGCCCTTTCAAATGTAGCAAACGAG GGATTACTGACAGAAGGATTTTTCTGGATTCCATCTTTGGGAGGCCCTACAACAATTGCT GCTCGGCAAAGTGGTGCTGGCATTTCTTGGCTCTTGCCTTTTGTGGATGGCCATCCTCCA TTAGGCTGGCATGACACGATATGTTATCTTGTGTTGCCTGTGCTACTTGTTGCTTCTCAG TTTGTCTCTATGGAAATCATGAAGCCACCCCAGACTGATGATCCATCGCAGAAGAACACA CTGCTTGTTTTGAAATTTCTTCCATTTATGATAGGGTGGTTCTCTTTGTCAGTGCCGTCA GGGTTGTCCATTTATTGGTTCACAAATAATATCCTCAGCACAGCCCAGCAAGTTTGGTTA CGGAAACTGGGAGGAGCAAAGCCTGTTGTCAATCAGGGGGGTAGTGGGATAATTACTGCA GGACGAGCAAAACGTACGAGTGCTCAACCAGCCCAACCTGGTGAAAGATTTAAACAGCTG AAAGAAGAGGAGAGCAAGAGAAAAGGCAACAAAGCGCTTGCTGCAGGAGATTCAGATCTT TCAGCCTCAACATCAGAGGATGAAGAGTCGGATGATGAGACTACTGAAGAGGGAGGACCT GAGGAAAGATACAATTCCAGTAGCAACAAGAAACTTCCAAATTACTCCGGAAAGAAGGGC AAAAGATCAAAGAGGAAGCGCATGGTTCAGTAGGTGTGACAGAACCTGATTGGATTTCAT TTTTGTCATTACTGGTTAATTCAGTTGGCCAGTACGGTTGTGTAGTTGATCTCGGACACA ATTTTGATGATCAGTTGGGAAGGCTAATCTTCAGGTGCAGGACAGACACGAAACATTCCA GTGGTACAGGTGTTTTGCTGGCACACAGCAAGATGAAAATAGTTCAGTACACTACAATAG GTTTGAGAGGATAGGCATGGCTTGAGTATGTGCTACAACATAAGAGTAGTACACAAATTA TTCTTGTGCTACTCTGCAATGTGGGTACCAAACTCACGCAGGAATTGCATAATTCATGCT CTACATGCATTTATTTCCCTCTTGTAACCTAATAACATTCTTTGCGGAGTATATTGCAGA AGTTAGAACAATCCAGTCGCCTAGAAAAGGTGAGGAAAAAAAAATACATTGCTGAACTTA CGTCTACTTT