Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0149350-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2669251:2674068:-1 gene:Os01g0149350 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0149350-00)
Sequence

ATGGGCACAGTTTTGGATGCTCTCGCTTGGAAATTCTTGGAAAAGCTGGGTCAGCTTATT
GAGGATGAGGTTATCATGACATTAAGTGTGAAAAGGGGTATTGAGAGCCTGAAGAAAAAT
CTGGAATTCTTCAACGCTGTTCGTGAGGATGCTGAGGCTCTGGCCATGGAGGATCCAGGG
ATAGATTCATGGTGGAAGAACATGAGAAATGTTATGTTTGATGTCGATGACATCGTGGAT
CTTTTCATGGTTCATTCACAGAAGTTTTTGCTGCCACCAAGGCCGGTATGTTGCAATCAG
CCCTTGTTCTCTAGCTTTGCAAAGTTTTCATTTGATCACAGGATTGCCAAAAGAATCGAT
AATATAAATGAAAAGTTTGAAGAAATTAAAATGAACAAAGAGATGTTTGGCTTCGAGAGA
ACCAACCGGCAACAAGTCCAGATAACAATTGTTGACAGAAGTCAGACATCTCCTGTAGAT
GAACTTGAGGTTGTTGGAGAAGATATCAGAAGGGCTGTTGATGACATGGTCAAAATGATT
GTTAGTAACTACAATGACAACAGGTCAACTGTTTTTGGGATCCAGGGGATGGGAGGCATC
GGTAAGACAACATTAGCTCAAAAGATATACAATGAACAGAGGATAAGGGAGAAATTCCAA
GTTCATATATGGTTGTGTATTTCTCAGAATTACACAGAGACCAGTTTGTTAAAACAGGCA
ATAAGAATGGCTGGAGGAATTTGTGATCAGCTGGAGACTAAGACTGAGCTTCTACCGCTT
CTAGTGGACACTATTAGAGGGAAGAGTGTTTTTCTTGTGCTGGATGATGTTTGGAAATCT
GATGTATGGATTGATCTTCTTCGATCGCCTTCCGAGAGAGGCTTGAATTCTCGTATCCTT
GTGACCTCAAGAAACCTGGATGTTTTGGTCGAAATGCATGCAACTTATACCCACAGGGTA
AACAAAATGAATGATTACGATGGCCTAGAACTGCTGATGAAGATGTCATTAGGGCCATAC
GAGCAAAGAAGAGAATTCAGTGGTGTTGGGTATCAAATTGTCAAAAAGTGTGATGGCCTT
CCTCTTGCCATCAAAGTTGTTGCAGGTGTCCTATCTAGTAAGAAAACAAAGGCAGAATGG
GAGAGCATCCGAGATAGCAAATGGTCTATTCATGGACTTCCCAAAGAACTAGGAGGTCCT
CTGTACTTAAGCTACAGCAACTTACCTCCTGAACTTAAGCAATTCTTTCTCTGGTGTGCT
TTGTTACCATCAAATTTTGGGATCCATCGTGATGCTGTCGCTTACTGGTGGGTCGCTGAA
GGCTTTGTGACGAAAATGCATGGGTACTCAATACATGAAGCCGCAGAAGAATACTACCAT
GAGCTAATTAGAATGAATCTTCTGCAGCCAAAACCAGAGTTTGTTGACAAATGGATGTCA
ACGATGCATGATCTTTTGAGGTCACTTGGACAATTTTTGACAAAGGATCATTCCTTATTC
ATGAATATGGAAAATAGCAAAACCTTACTGAATCTACGTCACTTAGTAATAAGCAATGAT
GTAAAAGAAATACCTGCTATAGAAGAGCTGAAGTGCTTGAGGAGCCTCCTAATTTTTAAT
AACAAGAACTTTAAGACAATTAATAAGGACATTTTCAGAGAGCTCAAGCATATTCGTGTC
TTAGTTCTCAGTGGAACAAGCATCCAAGTCATACCAGAGTCGGTGGGAAACTTGTTGCTA
CTGAGGTTGCTAGATCTAAGCTATACAAAAATCAAAAAACTCCCTGAATCCATAGGAAAT
CTTACCAGCCTTGAATACCTTTCTTTGCACTGTTGCAGACATTTGGATAGCCTGCCAGCT
AGTTTGATGAGACTGTCCAACATAAGTTTCCTTGAGCTAGAACAAACTGGAATCGACCAT
GTTCCAAAAGGGATCGCGAAGTTTCAGAAACTCTACAACCTTAAAGGAGTTTTCGAGAGT
GCATCTGGATTCAGGCTAGATGAACTGCAATGTCTCCCCAACATCCAACGTCTCCGGATT
GTAAAGCTAGAAAAAGCAACGCCAGGGGGTGCATTTGTACTCAGGAACAGTCTTCGTCTT
CGAGAACTGTGGTTTCGCTGCACAATGGGAGCTAATACTCATGATATTACCCACTACCAG
ATGAACGAGATTGAGAGAATTCAACAAGTCTATGAGATGCTAAGTCCATCATCAAGCCTA
ATTTATTTATTTTTTGAGGGGTTTCCTGGTGTAAGGTTCCCAGATTGGTTGTGCTCAGAA
CCAGAGTATAAGATGCCAAATTTGGGACATATGTACCTCAACGAGTGCATTTCATGCTCT
GAGCTTCCACCAGCAGGTCAGATGCCAGAACTACTAATTCTTCAGATCAGATGTGCAGAT
GCAGTAGTGAATATTGGTTCAGAGCTCCTAGGAAAAGGCGTCAGCAGTGCCACGCATATA
ACTATTTTCCCAAAGCTCAAATTGCTTCACATCATTGATATGAGCAATTTGGAAAGTTGG
TCTCTTAACACAGGGAATTTGCGTGGTAGATCTGAACAGCTCGTTCTGATGCCTTGCCTT
AAGCGTCTGTTTCTTAATGGCTGCCCAAAACTAAGGGCTCTCCCTGAAGACTTGCATAGG
ATTGCTAACTTAAGAAGAATCCACATTGAAGGTGCTCACACGCTGCATGAAATTGACAAC
CTTCCTTCAGTGTTATGGCTCAAGGTCAAGAATAACAGGTGTTTGAGGAGAATTTCCAAT
CTCTGTATTCTGCAGGACTTGTTTGCACAGGACTGTCCAGCGCTGGATCAGGCAGAGAAT
CTAATCTCACTAAAGAGACTCCACATGGTTGATTGCCAGAATGCAAAGCAATTCAGAATG
TGCCTCCTAGAAGACCAACAACTTGCAGTCGATGTTGTTACAGTTGGTGCAGATGGCAGG
GATATCTTTCCAGATGAAACTCTCTATAATTAG

Peptide Sequence

PEP ID

Os01t0149350-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2669251:2674068:-1 gene:Os01g0149350 transcript:Os01t0149350-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0149350-00)
Sequence

MGTVLDALAWKFLEKLGQLIEDEVIMTLSVKRGIESLKKNLEFFNAVREDAEALAMEDPG
IDSWWKNMRNVMFDVDDIVDLFMVHSQKFLLPPRPVCCNQPLFSSFAKFSFDHRIAKRID
NINEKFEEIKMNKEMFGFERTNRQQVQITIVDRSQTSPVDELEVVGEDIRRAVDDMVKMI
VSNYNDNRSTVFGIQGMGGIGKTTLAQKIYNEQRIREKFQVHIWLCISQNYTETSLLKQA
IRMAGGICDQLETKTELLPLLVDTIRGKSVFLVLDDVWKSDVWIDLLRSPSERGLNSRIL
VTSRNLDVLVEMHATYTHRVNKMNDYDGLELLMKMSLGPYEQRREFSGVGYQIVKKCDGL
PLAIKVVAGVLSSKKTKAEWESIRDSKWSIHGLPKELGGPLYLSYSNLPPELKQFFLWCA
LLPSNFGIHRDAVAYWWVAEGFVTKMHGYSIHEAAEEYYHELIRMNLLQPKPEFVDKWMS
TMHDLLRSLGQFLTKDHSLFMNMENSKTLLNLRHLVISNDVKEIPAIEELKCLRSLLIFN
NKNFKTINKDIFRELKHIRVLVLSGTSIQVIPESVGNLLLLRLLDLSYTKIKKLPESIGN
LTSLEYLSLHCCRHLDSLPASLMRLSNISFLELEQTGIDHVPKGIAKFQKLYNLKGVFES
ASGFRLDELQCLPNIQRLRIVKLEKATPGGAFVLRNSLRLRELWFRCTMGANTHDITHYQ
MNEIERIQQVYEMLSPSSSLIYLFFEGFPGVRFPDWLCSEPEYKMPNLGHMYLNECISCS
ELPPAGQMPELLILQIRCADAVVNIGSELLGKGVSSATHITIFPKLKLLHIIDMSNLESW
SLNTGNLRGRSEQLVLMPCLKRLFLNGCPKLRALPEDLHRIANLRRIHIEGAHTLHEIDN
LPSVLWLKVKNNRCLRRISNLCILQDLFAQDCPALDQAENLISLKRLHMVDCQNAKQFRM
CLLEDQQLAVDVVTVGADGRDIFPDETLYN

Transcript Sequence

Transcript ID

Os01t0149350-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2669251:2674068:-1 gene:Os01g0149350 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os01t0149350-00)
Sequence

TTGAACTTGGAGGGGCATTTCATCGAACGCCATTCGCGCATCGCTCTCCCCGAGCGCCCC
ATTCGTTACGTTACGTTACGTGCGAGATGAATCAGAGAATTTGCTCTTTGTTTATACTGG
AGTTATGCGATGTGATCCTGATCCAGGCTCAGTTCGACCTAGGCCCTGCTTATCTTTGCT
TGTGGGTCGTTGTCGCCGTCTTTGGTTTCGCTAGGAGAAGCATCTCTCTTTCTTGCGTAG
CTCTGAAACTTGGACTTTGCAACAAATGGTTGGGGCGCAGATGAGCTGTTTGACGAAATG
CCCAGTAGATTCCTGCGTGCGGTTGCATGCCCAGCACCGGCCAGCACCTGTTTGACTCTA
TTTTTTCCTTCGGTCTGCTGTCTGCACTCTGGTGATCTAATTGCTTCCAGGCTTCTTAGG
TGGTAAACAGGAAAAGAAAGTAAAGCACCAAGTGGCTCCTTTGCTGCAATAAAATCAAAT
TATTATTGTCAAGGGGATGAAAGGAAAAGAATACACAGCCTGGAAGAGCTTTCAACTTGA
ATCGCCTTGCAATTTTGTAACACTACTTGCCCTTTTTCACATTGCATCATCGTTGAAACA
TTTAGATTTGAATACAAAAATCTTTATGGGCAGATTCTGCCTCAAAAAGTACTTTCATAC
TATTTTAATTTTTTTTTCAGGTTTTTCAGACGTTTTGCAATAGAGAATGTCAATGTCTGT
TGGGACAAAGGCAGTTGGTGGCAAGAAAGGGAGGAGAATCTATAACAGCTCTCCTCTGCA
ATCTGCATTGCCCTCTCCGTTCTCATCAGGCTTTAGCCACACTGCTTCAATATCTCTTTC
CATCTTCCGTATTTAAGTGATCTGCAGCTCTGTGAGATATCTGTTCTGGGATCTGCAGTT
TCAAGCATCTCCCATTGGAGAGATCCAGCGGGAATCCCGGTTCTAGCACTATGGGCACAG
TTTTGGATGCTCTCGCTTGGAAATTCTTGGAAAAGCTGGGTCAGCTTATTGAGGATGAGG
TTATCATGACATTAAGTGTGAAAAGGGGTATTGAGAGCCTGAAGAAAAATCTGGAATTCT
TCAACGCTGTTCGTGAGGATGCTGAGGCTCTGGCCATGGAGGATCCAGGGATAGATTCAT
GGTGGAAGAACATGAGAAATGTTATGTTTGATGTCGATGACATCGTGGATCTTTTCATGG
TTCATTCACAGAAGTTTTTGCTGCCACCAAGGCCGGTATGTTGCAATCAGCCCTTGTTCT
CTAGCTTTGCAAAGTTTTCATTTGATCACAGGATTGCCAAAAGAATCGATAATATAAATG
AAAAGTTTGAAGAAATTAAAATGAACAAAGAGATGTTTGGCTTCGAGAGAACCAACCGGC
AACAAGTCCAGATAACAATTGTTGACAGAAGTCAGACATCTCCTGTAGATGAACTTGAGG
TTGTTGGAGAAGATATCAGAAGGGCTGTTGATGACATGGTCAAAATGATTGTTAGTAACT
ACAATGACAACAGGTCAACTGTTTTTGGGATCCAGGGGATGGGAGGCATCGGTAAGACAA
CATTAGCTCAAAAGATATACAATGAACAGAGGATAAGGGAGAAATTCCAAGTTCATATAT
GGTTGTGTATTTCTCAGAATTACACAGAGACCAGTTTGTTAAAACAGGCAATAAGAATGG
CTGGAGGAATTTGTGATCAGCTGGAGACTAAGACTGAGCTTCTACCGCTTCTAGTGGACA
CTATTAGAGGGAAGAGTGTTTTTCTTGTGCTGGATGATGTTTGGAAATCTGATGTATGGA
TTGATCTTCTTCGATCGCCTTCCGAGAGAGGCTTGAATTCTCGTATCCTTGTGACCTCAA
GAAACCTGGATGTTTTGGTCGAAATGCATGCAACTTATACCCACAGGGTAAACAAAATGA
ATGATTACGATGGCCTAGAACTGCTGATGAAGATGTCATTAGGGCCATACGAGCAAAGAA
GAGAATTCAGTGGTGTTGGGTATCAAATTGTCAAAAAGTGTGATGGCCTTCCTCTTGCCA
TCAAAGTTGTTGCAGGTGTCCTATCTAGTAAGAAAACAAAGGCAGAATGGGAGAGCATCC
GAGATAGCAAATGGTCTATTCATGGACTTCCCAAAGAACTAGGAGGTCCTCTGTACTTAA
GCTACAGCAACTTACCTCCTGAACTTAAGCAATTCTTTCTCTGGTGTGCTTTGTTACCAT
CAAATTTTGGGATCCATCGTGATGCTGTCGCTTACTGGTGGGTCGCTGAAGGCTTTGTGA
CGAAAATGCATGGGTACTCAATACATGAAGCCGCAGAAGAATACTACCATGAGCTAATTA
GAATGAATCTTCTGCAGCCAAAACCAGAGTTTGTTGACAAATGGATGTCAACGATGCATG
ATCTTTTGAGGTCACTTGGACAATTTTTGACAAAGGATCATTCCTTATTCATGAATATGG
AAAATAGCAAAACCTTACTGAATCTACGTCACTTAGTAATAAGCAATGATGTAAAAGAAA
TACCTGCTATAGAAGAGCTGAAGTGCTTGAGGAGCCTCCTAATTTTTAATAACAAGAACT
TTAAGACAATTAATAAGGACATTTTCAGAGAGCTCAAGCATATTCGTGTCTTAGTTCTCA
GTGGAACAAGCATCCAAGTCATACCAGAGTCGGTGGGAAACTTGTTGCTACTGAGGTTGC
TAGATCTAAGCTATACAAAAATCAAAAAACTCCCTGAATCCATAGGAAATCTTACCAGCC
TTGAATACCTTTCTTTGCACTGTTGCAGACATTTGGATAGCCTGCCAGCTAGTTTGATGA
GACTGTCCAACATAAGTTTCCTTGAGCTAGAACAAACTGGAATCGACCATGTTCCAAAAG
GGATCGCGAAGTTTCAGAAACTCTACAACCTTAAAGGAGTTTTCGAGAGTGCATCTGGAT
TCAGGCTAGATGAACTGCAATGTCTCCCCAACATCCAACGTCTCCGGATTGTAAAGCTAG
AAAAAGCAACGCCAGGGGGTGCATTTGTACTCAGGAACAGTCTTCGTCTTCGAGAACTGT
GGTTTCGCTGCACAATGGGAGCTAATACTCATGATATTACCCACTACCAGATGAACGAGA
TTGAGAGAATTCAACAAGTCTATGAGATGCTAAGTCCATCATCAAGCCTAATTTATTTAT
TTTTTGAGGGGTTTCCTGGTGTAAGGTTCCCAGATTGGTTGTGCTCAGAACCAGAGTATA
AGATGCCAAATTTGGGACATATGTACCTCAACGAGTGCATTTCATGCTCTGAGCTTCCAC
CAGCAGGTCAGATGCCAGAACTACTAATTCTTCAGATCAGATGTGCAGATGCAGTAGTGA
ATATTGGTTCAGAGCTCCTAGGAAAAGGCGTCAGCAGTGCCACGCATATAACTATTTTCC
CAAAGCTCAAATTGCTTCACATCATTGATATGAGCAATTTGGAAAGTTGGTCTCTTAACA
CAGGGAATTTGCGTGGTAGATCTGAACAGCTCGTTCTGATGCCTTGCCTTAAGCGTCTGT
TTCTTAATGGCTGCCCAAAACTAAGGGCTCTCCCTGAAGACTTGCATAGGATTGCTAACT
TAAGAAGAATCCACATTGAAGGTGCTCACACGCTGCATGAAATTGACAACCTTCCTTCAG
TGTTATGGCTCAAGGTCAAGAATAACAGGTGTTTGAGGAGAATTTCCAATCTCTGTATTC
TGCAGGACTTGTTTGCACAGGACTGTCCAGCGCTGGATCAGGCAGAGAATCTAATCTCAC
TAAAGAGACTCCACATGGTTGATTGCCAGAATGCAAAGCAATTCAGAATGTGCCTCCTAG
AAGACCAACAACTTGCAGTCGATGTTGTTACAGTTGGTGCAGATGGCAGGGATATCTTTC
CAGATGAAACTCTCTATAATTAGGCAGTGGTAGAGTCAAGAGTGGCGCGCGCCAAGGAAA
CGGTGGTACTAGTGTACCTGAAATGTTACAGGAAACAATTGAATTTCTGTGGTAACAAGT
GGTACTCAAAGTGCAGTCCAGTGGTAAATGCAGCTTGGTGCAGACCTAACAGCAGGAAGC
AACACCGTTTACCGAAATTATAGCTTGAATTCATCAGCTTGATCTAAATGCAAAAATTGA
GAACTTGGTCAGCACTGCCGAAAACTAGATATCCCTTCAAGTGAAGTTGCCTTACTCAAG
GTTAAGACTAACATCAATTTGCCACTGCTGGAGCTGAGAACGGTGGGTGCAAGTGCTGCC
TCAATTGCAGCCATAGTGTGATGCTATCTCCAAGATTGTTTCAGGCTGAGCAGTCTCTGA
GAACTTGTGCAGATTTCAAATCCAACGAGTCTCTGAACATGCCCTTGTCCAGTAGGCTCC
TCCGTGTAAATATCTTGAGCTGTGGATGCCCAAACTATAAGCAGCTAGCATGACCAATAG
ACATTCCCAGTACTCAATACAAAT