Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0147400-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:2570072:2571010:-1 gene:Os01g0147400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised domain XH domain containing protein. (Os01t0147400-00)
Sequence

ATGGAAGCCATTTATGCAAAATTAAATCAGCTTGAGAAGCAGCTGGAGCAGAGGCAGTCA
CTAGAGTCCATAATACGGCAGATGAACATGAATTTACAAGCAGGGGGGAGCCTCAGAAAG
GAAGATCATGAACACATTTACAGCATCATGATATGTTTGAGAACGATTGTAGATGAAGAA
AAAGAAATGCTGGTTGACTCATGTGCTGAAATCATGAAAAGATTGCGGACGAACAGCGAT
GAACTTAAAGAATATCGACAGGAGTTGATTAAGGGTGTCGAGAACATGACGATCACCACG
AGCACGATTATTGGGATAAAAAGGATGGGAGAACTTGATGAGAGGCCATTTCACCTTGCA
TGCAAGAGGAAGCACAGGGAGGATGATCCTAGGGGCAAAGCTGCAATGCTGATCTCATAC
TGGCAGGAAGAACTGAAGAATCCATCATGGCATCCGTTTAAGATTATTCAGGTTGATGGA
GAAGATAAGGGAGTTGTAGATGAAGATGATCAAAAACTGAGGCAGTTATGCAAAGATTAC
GGTGATAGTGTCTGCAATGCAGTGAAAGCCGCCATGGCTGAGCTCAACGAGTACAATCCT
CGTGGACGGCACACCATGAATGAGCTCTGGAACTTCAGGGAGGGCAGGAAGGCGACGACG
AAGGAGGTGGTGAAGTACATCTCAGACCAGCTGAAGACGAACAGTTCTCAGTCTGACAAT
TGA

Peptide Sequence

PEP ID

Os01t0147400-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:2570072:2571010:-1 gene:Os01g0147400 transcript:Os01t0147400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised domain XH domain containing protein. (Os01t0147400-00)
Sequence

MEAIYAKLNQLEKQLEQRQSLESIIRQMNMNLQAGGSLRKEDHEHIYSIMICLRTIVDEE
KEMLVDSCAEIMKRLRTNSDELKEYRQELIKGVENMTITTSTIIGIKRMGELDERPFHLA
CKRKHREDDPRGKAAMLISYWQEELKNPSWHPFKIIQVDGEDKGVVDEDDQKLRQLCKDY
GDSVCNAVKAAMAELNEYNPRGRHTMNELWNFREGRKATTKEVVKYISDQLKTNSSQSDN

Transcript Sequence

Transcript ID

Os01t0147400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2570072:2571010:-1 gene:Os01g0147400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised domain XH domain containing protein. (Os01t0147400-00)
Sequence

ATGGAAGCCATTTATGCAAAATTAAATCAGCTTGAGAAGCAGCTGGAGCAGAGGCAGTCA
CTAGAGTCCATAATACGGCAGATGAACATGAATTTACAAGCAGGGGGGAGCCTCAGAAAG
GAAGATCATGAACACATTTACAGCATCATGATATGTTTGAGAACGATTGTAGATGAAGAA
AAAGAAATGCTGGTTGACTCATGTGCTGAAATCATGAAAAGATTGCGGACGAACAGCGAT
GAACTTAAAGAATATCGACAGGAGTTGATTAAGGGTGTCGAGAACATGACGATCACCACG
AGCACGATTATTGGGATAAAAAGGATGGGAGAACTTGATGAGAGGCCATTTCACCTTGCA
TGCAAGAGGAAGCACAGGGAGGATGATCCTAGGGGCAAAGCTGCAATGCTGATCTCATAC
TGGCAGGAAGAACTGAAGAATCCATCATGGCATCCGTTTAAGATTATTCAGGTTGATGGA
GAAGATAAGGGAGTTGTAGATGAAGATGATCAAAAACTGAGGCAGTTATGCAAAGATTAC
GGTGATAGTGTCTGCAATGCAGTGAAAGCCGCCATGGCTGAGCTCAACGAGTACAATCCT
CGTGGACGGCACACCATGAATGAGCTCTGGAACTTCAGGGAGGGCAGGAAGGCGACGACG
AAGGAGGTGGTGAAGTACATCTCAGACCAGCTGAAGACGAACAGTTCTCAGTCTGACAAT
TGA