Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0144600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:2403276:2405947:1 gene:Os01g0144600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144600-01)
Sequence

ATGGCGGCGAAGCGGGAGCTCTCGAGCACCCTCAGGAACCTCAAGTTTATGCAGCGGGCG
GCTGTTGCGCAGAAGGTTGAGGAGAAGCCCAAGGTTGAGGCGGCGGCGGCGGCGGCGGAG
GAGGAGGTGGTGACGGTGCCTAGCGGAGGTGTTGGCTCGTCGGTTAAAGTCGCTCGGAAG
TGCGTAGTTATCATGGAGGGTAATCCACACCCTGGAGCTGCAAAGGGTCGAATGTCATTC
CTGAATTTCAACCCATCCATTGATAAATTAACTCAAGAGGCAACGGGTGGCCGCCAATCA
CAGTTAGCATCACCTAGTAATAATCATCAGGATGGTTCGAATTCCAGCAGAACGGATGAA
GTATCAAGAACAAGATTTAGTGACTTCAACATTGATAGTTCAGAAAGCATATCTCTGAAT
GAACTAAAGAGGAAACAGCCTGAGCTTGAAATGGAAACACCACCATCACATAGGCAGCCC
AAGACCACAGGTAAGAGTATCGATGGTGATTCATCTTCCCAAAGCAATGGCCGTGGGTCT
CACAAGTCAAACAAGCGTGAAAAGCTTGACTGGAATCTTCTTAGACCACGGAAATCAAAA
TGA

Peptide Sequence

PEP ID

Os01t0144600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:2403276:2405947:1 gene:Os01g0144600 transcript:Os01t0144600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144600-01)
Sequence

MAAKRELSSTLRNLKFMQRAAVAQKVEEKPKVEAAAAAAEEEVVTVPSGGVGSSVKVARK
CVVIMEGNPHPGAAKGRMSFLNFNPSIDKLTQEATGGRQSQLASPSNNHQDGSNSSRTDE
VSRTRFSDFNIDSSESISLNELKRKQPELEMETPPSHRQPKTTGKSIDGDSSSQSNGRGS
HKSNKREKLDWNLLRPRKSK

Transcript Sequence

Transcript ID

Os01t0144600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2403276:2405947:1 gene:Os01g0144600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144600-01)
Sequence

CTCTTCTCGTCGTGCGCCTCCTCCCCGCGGCGACGGCTTCCGCGAGCCGCGTAAACCCTA
ACCCTAAATCGGTAAGCGAAGCAGCGGCAGCGGCAGAGGCGGCGGCGGAGGAGGAAGGTG
GCGATGGCGGCGAAGCGGGAGCTCTCGAGCACCCTCAGGAACCTCAAGTTTATGCAGCGG
GCGGCTGTTGCGCAGAAGGTTGAGGAGAAGCCCAAGGTTGAGGCGGCGGCGGCGGCGGCG
GAGGAGGAGGTGGTGACGGTGCCTAGCGGAGGTGTTGGCTCGTCGGTTAAAGTCGCTCGG
AAGTGCGTAGTTATCATGGAGGGTAATCCACACCCTGGAGCTGCAAAGGGTCGAATGTCA
TTCCTGAATTTCAACCCATCCATTGATAAATTAACTCAAGAGGCAACGGGTGGCCGCCAA
TCACAGTTAGCATCACCTAGTAATAATCATCAGGATGGTTCGAATTCCAGCAGAACGGAT
GAAGTATCAAGAACAAGATTTAGTGACTTCAACATTGATAGTTCAGAAAGCATATCTCTG
AATGAACTAAAGAGGAAACAGCCTGAGCTTGAAATGGAAACACCACCATCACATAGGCAG
CCCAAGACCACAGGTAAGAGTATCGATGGTGATTCATCTTCCCAAAGCAATGGCCGTGGG
TCTCACAAGTCAAACAAGCGTGAAAAGCTTGACTGGAATCTTCTTAGACCACGGAAATCA
AAATGAAGTCCGGAGTTAGCGTAGCCAAAACTTTGCTCTTGTACCCCATTTGTACTCTGT
ATCTGATTAGCATTTTCTCCTGTTTCGCGAGTTATATCTAGAAAGCTGGTAACCAGTAGT
TTATTTACAGTAAAATGTTTGTCCTTGCCTAATCTTGGTTTCAACTGTTCCCCTGTTCTT
GATATGTTGTTTACTGCATTACTTTGCTGTAACAAGGTTCTGCAGCAGCAATGAGAAATT
ACAGTTTTGACAGTGGTTAATGCTGC