Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0144000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:2378825:2382584:-1 gene:Os01g0144000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144000-01)
Sequence

CGTCCCTATCGCGTCGGATCGCCACCCACCTCGCCGCCGCTGCTTGCTTCACTCGCCTCA
GATCCGCGCCGCCGCCCCCCGCGAATCCCCTCTCCTCCCCGAACCCTAGCCCCGCTCTCG
GGGGTTCCCCCTCCTCCTCCGCCGCCCGCCGCGTCCGCCACTTCCATCGGAGGTGATCGA
TCGAGCGGGGGTGGGGGGAGAGGTTGGGCGGCTTGGATTGGAGAGGGCTCGGAGTGGATG
TCGAGGAGGTCGGTGAATCCGAGCCGGCGGGTGGCGGATGGGGGATTGCCGTCTGTCGGT
GGCCTGCTTCACCCCAAGTCACGCTCGCCGCCCGTGCTCACCATCGCCCTCGTGGTCCTG
GGTGTCATTATTCTGATCGCCTACTTCAATAGCGGCTCAGGTGTAACAGTTACTAGCAGA
GAAGCTGTGAGCAGGTCTGAAGGTTCTTGTACACCAGAAGTCATGCAAGCACTTCCTTAT
CTTAAAAAGGCATATGGCAATGAGTTGCATAAGGTTCTCCATGTTGGCCCTGATAGTTGT
ACAGTAGTTTCTAACTTGTTGAAGGAAGGGAAGGTTGAAGCATGGGGAGTGGAGCCTTAT
GATTTGGAGGATACTGATAGTAGCTGCAAAAGCCTTGTGCGCAAGGGCTTTGTTCGTATG
GCTGATATCAAGTTCCCTCTTCCATACCGCCAAGATTCCTTTAACCTTGTTATCGTATCA
GATGCTTTGGATTATTTGACCCCAAGATATCTGAACAAAACACTTCCAGATTTAGCAAGG
ATTTCTACAGATGGTCTTGTTATCTTTGCCGGCAATCCAGGTCAACAGAAGGCTAAGGTT
TCTGAACTACCAAAATTCGGAAGACCGGCAAAGTTGCGGAGTTCTTCGTGGTGGTCGCGA
TACTTTATCCAGACTGGCTTGAGAGAGAATGAAGGGCCATTGAAGAAGTTTGAGCAGGCT
GCTTCCAAGAACAAATACAAACCAGACTGTCAAATCTTCCATCTTAGCTCGTAG

Peptide Sequence

PEP ID

Os01t0144000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:2378825:2382584:-1 gene:Os01g0144000 transcript:Os01t0144000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144000-01)
Sequence

RPYRVGSPPTSPPLLASLASDPRRRPPRIPSPPRTLAPLSGVPPPPPPPAASATSIGGDR
SSGGGGRGWAAWIGEGSEWMSRRSVNPSRRVADGGLPSVGGLLHPKSRSPPVLTIALVVL
GVIILIAYFNSGSGVTVTSREAVSRSEGSCTPEVMQALPYLKKAYGNELHKVLHVGPDSC
TVVSNLLKEGKVEAWGVEPYDLEDTDSSCKSLVRKGFVRMADIKFPLPYRQDSFNLVIVS
DALDYLTPRYLNKTLPDLARISTDGLVIFAGNPGQQKAKVSELPKFGRPAKLRSSSWWSR
YFIQTGLRENEGPLKKFEQAASKNKYKPDCQIFHLSS

Transcript Sequence

Transcript ID

Os01t0144000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2378825:2382584:-1 gene:Os01g0144000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0144000-01)
Sequence

CCGTCCCTATCGCGTCGGATCGCCACCCACCTCGCCGCCGCTGCTTGCTTCACTCGCCTC
AGATCCGCGCCGCCGCCCCCCGCGAATCCCCTCTCCTCCCCGAACCCTAGCCCCGCTCTC
GGGGGTTCCCCCTCCTCCTCCGCCGCCCGCCGCGTCCGCCACTTCCATCGGAGGTGATCG
ATCGAGCGGGGGTGGGGGGAGAGGTTGGGCGGCTTGGATTGGAGAGGGCTCGGAGTGGAT
GTCGAGGAGGTCGGTGAATCCGAGCCGGCGGGTGGCGGATGGGGGATTGCCGTCTGTCGG
TGGCCTGCTTCACCCCAAGTCACGCTCGCCGCCCGTGCTCACCATCGCCCTCGTGGTCCT
GGGTGTCATTATTCTGATCGCCTACTTCAATAGCGGCTCAGGTGTAACAGTTACTAGCAG
AGAAGCTGTGAGCAGGTCTGAAGGTTCTTGTACACCAGAAGTCATGCAAGCACTTCCTTA
TCTTAAAAAGGCATATGGCAATGAGTTGCATAAGGTTCTCCATGTTGGCCCTGATAGTTG
TACAGTAGTTTCTAACTTGTTGAAGGAAGGGAAGGTTGAAGCATGGGGAGTGGAGCCTTA
TGATTTGGAGGATACTGATAGTAGCTGCAAAAGCCTTGTGCGCAAGGGCTTTGTTCGTAT
GGCTGATATCAAGTTCCCTCTTCCATACCGCCAAGATTCCTTTAACCTTGTTATCGTATC
AGATGCTTTGGATTATTTGACCCCAAGATATCTGAACAAAACACTTCCAGATTTAGCAAG
GATTTCTACAGATGGTCTTGTTATCTTTGCCGGCAATCCAGGTCAACAGAAGGCTAAGGT
TTCTGAACTACCAAAATTCGGAAGACCGGCAAAGTTGCGGAGTTCTTCGTGGTGGTCGCG
ATACTTTATCCAGACTGGCTTGAGAGAGAATGAAGGGCCATTGAAGAAGTTTGAGCAGGC
TGCTTCCAAGAACAAATACAAACCAGACTGTCAAATCTTCCATCTTAGCTCGTAGGCGTG
TTCTGATCTAGGTGATGTGTATCCATGAAACCTGGATCGTTGCCTCGCCGGTTTTGTAAG
CAATATCCTGTTTACCCCCGTTGACTTGCGCTTCTTTTACACGGAGGAATTGTCACATTA
AGAGCCAGCCAGCCTTGAGCATAGGTAGCTTATGTAGAGAGATTTGCCACATGCTGCTAG
AAAATTCTTCCTGGAAAGTTAAATTATGTGTTACCAAGAGGTGCAAATTGAAGCCCTGAG
GATATATATGTAAGAACTTCACACTGTTGTACCCTGTTATTCTTCTTGGTGTTACAGTTA
TTCCTGGTGAACCAGCTGCAGTTCCGTGAGCAGTTTGTAATGTACTCAGTTCAAGAGAGA
GAGAAAAAATATATATCT