Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0143800-03
CDS Infomation

cds chromosome:IRGSP-1.0:1:2374572:2376733:-1 gene:Os01g0143800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os01t0143800-01);Mitochondrial glycoprotein family protein. (Os01t0143800-03)
Sequence

ATGGCCTTCGTCTCCGCCGCCGCCGCCGCCACCGCCGCCGCCGCCTTCCTCCCCGGCGTC
TCGTCCGCGTCCCGCGCAGGAACACCCTTGCTCTCGCTGCAACGGCAGCCGCTCGCGGGT
TCCCTGCGCGCGGCGGCGCAGGGGTCGAGCGCCTCTTCGGGGCAGGTGGTGATGGAGAGC
AAGGTCAAGGCGAAGAAGAAGAAGGGGTCCGGCGCCGGGAACCTCCCCGGAGCCATCGAC
GCGGAGATCAGGGAGGCGCAGGACTACCTCGCCATCGACGAGCAGGAACCTGTTCCGGAA
AACTTCCCTTTTGAAATCCTTGACGAAGAAGGGATGAGTGTGGTTATTCTGAAAAGGGAC
TACAAAGATGAGAAGATTGAGGTCATTGTCAGCATGCCAAATTTAGAAGGGGGCCCTGAG
TTTGACGACGAAGAAGCCGAGGGTGAGGGCAAGAATGCTAGCAAGGATGATGAAGATGAA
GAGGAAGACGAGAGCGCTGGAGATAGCAGCGTGTCTCTAAAGGTGACAGTCTCCAAGGGC
TCTGGGCCCAAACTTGAGTTCACCTGCACAGCCTTTCGTGAGGAGATCACCATCGACGAC
ATGTTAATAGTGGAGAATGCAGCCACAGAAGGAGATGAGAAATTCCCTTACGAGGGCCCT
GAATTCACCGAGCTACCGGTGAATGTGCAGAAGGGCCTATTCAAGTACCTGGAGCAAAGA
GGGATCACTCTGCCGACCACCAACTACATGCACGATTACATGGTGACCAAGCAAACCAAG
GAGTACGTCGGGTGGATGACCAAGCTGAAGGACTTCGTCCGGCAATGA

Peptide Sequence

PEP ID

Os01t0143800-03
PEP Infomation

pep chromosome:IRGSP-1.0:1:2374572:2376733:-1 gene:Os01g0143800 transcript:Os01t0143800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os01t0143800-01);Mitochondrial glycoprotein family protein. (Os01t0143800-03)
Sequence

MAFVSAAAAATAAAAFLPGVSSASRAGTPLLSLQRQPLAGSLRAAAQGSSASSGQVVMES
KVKAKKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVILKRD
YKDEKIEVIVSMPNLEGGPEFDDEEAEGEGKNASKDDEDEEEDESAGDSSVSLKVTVSKG
SGPKLEFTCTAFREEITIDDMLIVENAATEGDEKFPYEGPEFTELPVNVQKGLFKYLEQR
GITLPTTNYMHDYMVTKQTKEYVGWMTKLKDFVRQ

Transcript Sequence

Transcript ID

Os01t0143800-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:2374572:2376733:-1 gene:Os01g0143800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial glycoprotein family protein. (Os01t0143800-01);Mitochondrial glycoprotein family protein. (Os01t0143800-03)
Sequence

TTCGCTTCGCCACCGCGTTCGCCATGGCCTTCGTCTCCGCCGCCGCCGCCGCCACCGCCG
CCGCCGCCTTCCTCCCCGGCGTCTCGTCCGCGTCCCGCGCAGGAACACCCTTGCTCTCGC
TGCAACGGCAGCCGCTCGCGGGTTCCCTGCGCGCGGCGGCGCAGGGGTCGAGCGCCTCTT
CGGGGCAGGTGGTGATGGAGAGCAAGGTCAAGGCGAAGAAGAAGAAGGGGTCCGGCGCCG
GGAACCTCCCCGGAGCCATCGACGCGGAGATCAGGGAGGCGCAGGACTACCTCGCCATCG
ACGAGCAGGAACCTGTTCCGGAAAACTTCCCTTTTGAAATCCTTGACGAAGAAGGGATGA
GTGTGGTTATTCTGAAAAGGGACTACAAAGATGAGAAGATTGAGGTCATTGTCAGCATGC
CAAATTTAGAAGGGGGCCCTGAGTTTGACGACGAAGAAGCCGAGGGTGAGGGCAAGAATG
CTAGCAAGGATGATGAAGATGAAGAGGAAGACGAGAGCGCTGGAGATAGCAGCGTGTCTC
TAAAGGTGACAGTCTCCAAGGGCTCTGGGCCCAAACTTGAGTTCACCTGCACAGCCTTTC
GTGAGGAGATCACCATCGACGACATGTTAATAGTGGAGAATGCAGCCACAGAAGGAGATG
AGAAATTCCCTTACGAGGGCCCTGAATTCACCGAGCTACCGGTGAATGTGCAGAAGGGCC
TATTCAAGTACCTGGAGCAAAGAGGGATCACTCTGCCGACCACCAACTACATGCACGATT
ACATGGTGACCAAGCAAACCAAGGAGTACGTCGGGTGGATGACCAAGCTGAAGGACTTCG
TCCGGCAATGAGAAATTGCCGAGCAATTTGGCAGGATTTTTGGTAGCTTAGCCTTTTAGC
ATACCTGCATATGTAACAAGGATTACTAGAATTATGCGAAGCAATGCAACAACCGGGGAA
ACTGCCTTCCCTGCAATGTGCGATTTCTGATGCCCAGTAGTCAATCTGAGGCTATTGGCA
CTTATGATATCAGTGCTTATTTT