Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0141900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:2261501:2266230:1 gene:Os01g0141900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0141900-01)
Sequence	ATGCATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGG ACGCTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGC CGCCGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTT TCCGGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCG CGCCCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGG AGAGCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTAC GACTGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAG TCCCCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTG GCCAATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAAC AACTTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAAT TCATCAAGGCCTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCA AGACCTTCAACCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCA AGATCATCAACTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCA AGAACATCTGGCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCT AGCAGGTCATCCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCA TCATCCAGGCCCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACA AGACGGCCTTCTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACC TCAATCTCCAAACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCG TCAACACCTTCAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAA ATGCCTGGCTTCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCA ACCTCTGCTACTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCT GGGCCAGCTGCTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAAT GGTAGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGT GACAGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGA AGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAA TCATCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGAC ATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATG ACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCA ATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTC AACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGG GCAGGACAATACAGGCGATGA

Peptide Sequence

PEP ID	Os01t0141900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:2261501:2266230:1 gene:Os01g0141900 transcript:Os01t0141900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0141900-01)
Sequence	MHRVAMAAAAAGDGGDGRGRTLGAVIKEKDEELALFLEMRRREKERGAAAAAAAAEQLLL SGDRVDVARDGMLLVDQPPPRPQPPAEHKAAAYRMTGGFRRAPGGADDFLNSDGGDKNDY DWLLTPPGTPLFPSLEESKKSPVSQTGTPKTRPTALKSRLANHPDPPSRTTLPLRATSSN NLNSAATTRRPSSSGGHTSNSSRPSTPTGRPALTNTSKGSRPSTPTSRATVPSKSGPPAP RSSTPTSRSTLTSARSTTPSRTSGPATRTSIPSGRASAPASRSSTPTSRSSIPATRSSTP SSRPSIPAQSKPVSRSSTPTRRPSATSTQHGSLAAPVRSTSISKPAPTMSKSSSPAKTIA STPSRGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSLPERPTSATRGRPGAPSSRSSSVEP GPAARPRRQSCSPSRGRTLNGSVPSGSSVPAVRRSHLNSGDSVNPVQMGNKMVERVVNMR RLVPPKHDDQRSSLNGLSGKSSNSPDSSGFGRTLSKKSLDMALRHMDIRRSIPNNLRPLM TSIPASSVHSARSGSTRSRPISVSDSPLATSSNASSEPSVNNNLMCLDSIEIDDELCSDR AGQYRR

Transcript Sequence

Transcript ID	Os01t0141900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2261501:2266230:1 gene:Os01g0141900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0141900-01)
Sequence	ATCTTCATCCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGTTTGTTCG CTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCACTGCTCC TCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTAATGCCAC GGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATGCATCGGG TGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACGCTGGGGG CGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGCCGCGAGA AGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCCGGGGACC GCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGCCCGCAGC CTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGAGCGCCCG GCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGACTGGCTTC TGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCCCCAGTGA GCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCCAATCATC CAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAACTTGAACT CAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCATCAAGGC CTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCAAGACCTTCAA CCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCAAGATCATCAA CTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCAAGAACATCTG GCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCTAGCAGGTCAT CCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCATCATCCAGGC CCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACAAGACGGCCTT CTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACCTCAATCTCCA AACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCGTCAACACCTT CAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAAATGCCTGGCT TCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCAACCTCTGCTA CTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCTGGGCCAGCTG CTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGTAGTGTGC CTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGACAGTGTCA ATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGGCTAGTTC CTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCATCAAACT CTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATGGCTCTTC GACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATAC CAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTT CAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACC TGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAAT ACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTACGA CCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATCTCCAAGATGACCTGATGGGTTCCT ATTCTCATATGTAGTTCATTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGC GAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTAT GTGTTCAGTCCTTGAGTATCATTTTCAGTACTTTGGGAGTTTAAGTTAGGTCTTCTTAGC CCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATG TGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCTGTTGTTGTATCAGCAATGTAAATT TAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTGCCGTAAAA CTGTTGCTGTAATCTTGTAAATTCCAAATTGGTAAG