Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0141300-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:2226409:2229526:-1 gene:Os01g0141300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar sorting protein 4b. (Os01t0141300-00)
Sequence	ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGAC AATGGCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCCCTCGAGTACTTCAAG ACCCACCTCAAGTACGAGAAGGACCCCAAGATCAAGGACGCCATCGCCGCCAAGTTCACC GAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGGGCACATCGGCGGCGGC GGCGGCGGCGGCGACTCCGAGCAGGCCAAGCCGAGGGGCATGCTCAGGTCGGCCATCGTC GCCGCGAAGCCGAGCGTCAAGTGGAGCGACGTCGCCGGCTTGGAGAGCGCCAAGGAGGCA CTGCAAGAGGCCGCCATATTGCCTATCAAGTTTCCACACTTCTTTACAGGCAAGCGAAGC CCATGGAAAGCTTTTCTTTTGTATGGTCCACCAGGAACTGGAAAGTCTTATTTGGCTGAA GCTGTTGCAACCGAGGTTGATTCAACATTCTTCAGCATATCTTCATCAGACCTTGTTTCA AAATGGATGGGAGAAAGTGAGAAACTAGTTGCTAATCTTTTCCAGATGGCCCGTGAAAAT GCTCCCTCCATTATCTTCATCGATGAAATCGATTCTTTATGCGGCCAACGTGGAGAATGT AATGAAAATGAAGCTTCCCGGAGAATCAAGACTGAACTTCTTGTGCAAATGCAGGGTTTC GATAATAGCAATGATAAAGTTCTGGTTCTTGCTGCTACAAATATGCCACATGTTCTGGAC CAGGCTATGCGGCGACGGTTTGACAAATGTATCTACATTCCCCTACCTGACTTGAAGGCA AGGAAAGACACTTTTAAGATCCACATTGGGGACACACCACATAGCTTAACTGAAGGTGAT TTTGTGAGCTTGGCCTATCAAACAGAGGGGTTTTCTGGCTCAGATATTGCTGTTTGTGTG AAGGATGCGTTATTTCAACCTGTGAGGAAAACACAGGATGCCAAGTTCTTCATCAAGGCA GACGATGACACGTGGACGCCAAGTGAACAGAGTCAGCCTGGTTCCATACAAACCACCATG CAGGAACTCGCATCAAAAGGTTTGGCTGCCAAGATTCTTCTTCCACCAATCTCAAAGATA GATTTCGATGAAGTCCTCGTGAGGCAGAGACCAACGGTGAGCAAGAAAGATCTAGTGGTG TATGAGAAGTTCACACAAGAGTTCAGTGAGGAGGAGATATTTATTTCCCCTCTATCTAAT GAAAAACCACAATCTCATGATGTTCCTTTCAAAAAAAGTGAGGAGGAGATATTGACAATG CAGAAAAAAACGAAAAGTGAGGAGGAGATATTGACGATGCAAAAGAAAACGAAATCCCCT ATGAGGAATTTTCTTAATGTGTGGGCTAAAGCATGCTGTTGTGCCAGTACAATTTGA

Peptide Sequence

PEP ID	Os01t0141300-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:2226409:2229526:-1 gene:Os01g0141300 transcript:Os01t0141300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar sorting protein 4b. (Os01t0141300-00)
Sequence	MYSNFKEQAIEYVKQAVQEDNGGNYVKAFPLYMNALEYFKTHLKYEKDPKIKDAIAAKFT EYLRRAEEIRAVLDGHIGGGGGGGDSEQAKPRGMLRSAIVAAKPSVKWSDVAGLESAKEA LQEAAILPIKFPHFFTGKRSPWKAFLLYGPPGTGKSYLAEAVATEVDSTFFSISSSDLVS KWMGESEKLVANLFQMARENAPSIIFIDEIDSLCGQRGECNENEASRRIKTELLVQMQGF DNSNDKVLVLAATNMPHVLDQAMRRRFDKCIYIPLPDLKARKDTFKIHIGDTPHSLTEGD FVSLAYQTEGFSGSDIAVCVKDALFQPVRKTQDAKFFIKADDDTWTPSEQSQPGSIQTTM QELASKGLAAKILLPPISKIDFDEVLVRQRPTVSKKDLVVYEKFTQEFSEEEIFISPLSN EKPQSHDVPFKKSEEEILTMQKKTKSEEEILTMQKKTKSPMRNFLNVWAKACCCASTI

Transcript Sequence

Transcript ID	Os01t0141300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2226409:2229526:-1 gene:Os01g0141300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to vacuolar sorting protein 4b. (Os01t0141300-00)
Sequence	ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGAC AATGGCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCCCTCGAGTACTTCAAG ACCCACCTCAAGTACGAGAAGGACCCCAAGATCAAGGACGCCATCGCCGCCAAGTTCACC GAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGGGCACATCGGCGGCGGC GGCGGCGGCGGCGACTCCGAGCAGGCCAAGCCGAGGGGCATGCTCAGGTCGGCCATCGTC GCCGCGAAGCCGAGCGTCAAGTGGAGCGACGTCGCCGGCTTGGAGAGCGCCAAGGAGGCA CTGCAAGAGGCCGCCATATTGCCTATCAAGTTTCCACACTTCTTTACAGGCAAGCGAAGC CCATGGAAAGCTTTTCTTTTGTATGGTCCACCAGGAACTGGAAAGTCTTATTTGGCTGAA GCTGTTGCAACCGAGGTTGATTCAACATTCTTCAGCATATCTTCATCAGACCTTGTTTCA AAATGGATGGGAGAAAGTGAGAAACTAGTTGCTAATCTTTTCCAGATGGCCCGTGAAAAT GCTCCCTCCATTATCTTCATCGATGAAATCGATTCTTTATGCGGCCAACGTGGAGAATGT AATGAAAATGAAGCTTCCCGGAGAATCAAGACTGAACTTCTTGTGCAAATGCAGGGTTTC GATAATAGCAATGATAAAGTTCTGGTTCTTGCTGCTACAAATATGCCACATGTTCTGGAC CAGGCTATGCGGCGACGGTTTGACAAATGTATCTACATTCCCCTACCTGACTTGAAGGCA AGGAAAGACACTTTTAAGATCCACATTGGGGACACACCACATAGCTTAACTGAAGGTGAT TTTGTGAGCTTGGCCTATCAAACAGAGGGGTTTTCTGGCTCAGATATTGCTGTTTGTGTG AAGGATGCGTTATTTCAACCTGTGAGGAAAACACAGGATGCCAAGTTCTTCATCAAGGCA GACGATGACACGTGGACGCCAAGTGAACAGAGTCAGCCTGGTTCCATACAAACCACCATG CAGGAACTCGCATCAAAAGGTTTGGCTGCCAAGATTCTTCTTCCACCAATCTCAAAGATA GATTTCGATGAAGTCCTCGTGAGGCAGAGACCAACGGTGAGCAAGAAAGATCTAGTGGTG TATGAGAAGTTCACACAAGAGTTCAGTGAGGAGGAGATATTTATTTCCCCTCTATCTAAT GAAAAACCACAATCTCATGATGTTCCTTTCAAAAAAAGTGAGGAGGAGATATTGACAATG CAGAAAAAAACGAAAAGTGAGGAGGAGATATTGACGATGCAAAAGAAAACGAAATCCCCT ATGAGGAATTTTCTTAATGTGTGGGCTAAAGCATGCTGTTGTGCCAGTACAATTTGA