Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0138400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:2053583:2057636:1 gene:Os01g0138400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os01t0138400-01)
Sequence	ATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATGTCTGCTCGCGCCGCGG CACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTGCGGGAACGTGACCATC GCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTCGTCGTCCGCGCCGTGC GGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGCGTCGCTGGCCCGCTCC TTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCGCACCGTCGTCGTCGCC AACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAAGATCGACGTCTCCGCC AGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCAGCTCGTCTTCCTCTTC AACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAACGTCACGTGCCCGGGA GCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGCCGCCAGAGTGGTCGCC GGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGGGGCGAGCCCGACGGAC TACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGCGCCCGCCGGCGACTGC ATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGACACGGAGGCGTTCGCC TGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGATGCAAAGAAGTCCGGGAAC AAGGTCATCCTGATAGTGTCACTGTCGATCTGTGCGACTGGGTTGGTGCTATTGGCATGC ATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTTCAGTTTTCTGAACGCC ATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCTGCTGCAGAGTTACGGA TCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGATAACGAAGTCCTTCAGC CAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCACGCTCGCCGACGGCCGC GCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGAGGAGTTCCTCAACGAG GTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCTGCTCGGCTTCTGCCTC GAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGGCTCGCTGGACAAGTAC ATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGCGGAGGCGACGGCGAGC CCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGCCGTCGGCGTGGCGCGG GGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCACTTCGACATCAAGCCG CACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGACTTCGGGATGGCGAAG CTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAGGGGGACGATAGGGTTC ATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGACCAAGTCCGACGTGTAC AGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAACGTCAAGGCCTACGCC GAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGACCACCTGCTCGAGGAC GGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGCCGGCGGCGGCGCCGGA TCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGGGCTGTGGTGCATACAG ACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGATGCTGGAGAGAAGCGTC CACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTCGTCCCCGTCGCGGCCG TCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGATCAAGGTTATCAACACCGGGA AGCACAGCGTGA

Peptide Sequence

PEP ID	Os01t0138400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:2053583:2057636:1 gene:Os01g0138400 transcript:Os01t0138400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os01t0138400-01)
Sequence	MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPPPSSSSAPC GPAAFQVNCDNGSRASLARSFRSGYKILGVSYANRTVVVANDNVQTDASGCPVPKIDVSA SLTLAPFTASPANSQLVFLFNCTSSSRPPPAGFVNVTCPGAKAVVRLDTSYNNTAARVVA GGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNASGGQCGYDADTEAFA CICSDGSSRPGICDAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQNRFSFLNA MDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGR AVAVKFLHHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKY IYSTSAAAAAEAEEAEATASPDRDVLGWKVLQEIAVGVARGLEYLHDGCNTRIIHFDIKP HNVLLDEGFRPKIADFGMAKLCNPKESILSMADTRGTIGFIAPEVFSRGFGDISTKSDVY SYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAAATAGGGAG SPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRP SSYPSSASDFTQRSRLSTPGSTA

Transcript Sequence

Transcript ID	Os01t0138400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:2053583:2057636:1 gene:Os01g0138400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os01t0138400-01)
Sequence	ACCAACCGTCGTCGCGATGGACACGCCATTGCTGCTGCTGCTTCCCTTCCTGGCGGCATG TCTGCTCGCGCCGCGGCACGCGGCGGAGGCGGCCGTCACGAGCTGCGCGCCGAGGAGGTG CGGGAACGTGACCATCGCCTACCCGTTCTGGCTGCCGGACTCATCGCCGCCGCCGTCGTC GTCGTCCGCGCCGTGCGGCCCCGCGGCGTTCCAGGTGAACTGCGACAACGGCAGCCGCGC GTCGCTGGCCCGCTCCTTCCGCAGCGGGTACAAGATCCTCGGCGTGTCGTACGCCAACCG CACCGTCGTCGTCGCCAACGACAACGTCCAGACCGACGCCAGCGGCTGCCCGGTGCCCAA GATCGACGTCTCCGCCAGCCTCACCCTCGCGCCGTTCACCGCCAGCCCGGCCAACAGCCA GCTCGTCTTCCTCTTCAACTGCACCAGCAGCAGCAGGCCGCCGCCGGCAGGGTTCGTCAA CGTCACGTGCCCGGGAGCGAAGGCCGTGGTCCGGCTCGACACGAGCTACAACAACACCGC CGCCAGAGTGGTCGCCGGAGGCTGCGACTACGCGGCCGTTCCGGTGGTCGGCGTGCCGGG GGCGAGCCCGACGGACTACCCGCAGCTGCTCCGGGGAGGCTACATGCTGGAGTGGAGGGC GCCCGCCGGCGACTGCATGGCGTGCAATGCCAGCGGCGGCCAGTGTGGCTACGACGCCGA CACGGAGGCGTTCGCCTGCATCTGCTCCGACGGCTCATCGCGCCCGGGGATATGTGATGC AAAGAAGTCCGGGAACAAGGTCATCCTGATAGTGTCACTGTCGATCTGTGCGACTGGGTT GGTGCTATTGGCATGCATCGCCATCGTCTACAAGTGTCGCCGACGTATGCAAAATCGTTT CAGTTTTCTGAACGCCATGGACGGTGCAAGCAGAACGGATACTGCAAAGGTGGAGAAGCT GCTGCAGAGTTACGGATCCCTAGCTCCCCGGAGGTTCAGGTACTCGGAGCTGAAGAAGAT AACGAAGTCCTTCAGCCAGCGGCTCGGCGAGGGCGGCTACGGCACGGTGTTCAGCGGCAC GCTCGCCGACGGCCGCGCCGTCGCCGTCAAGTTCCTCCACCACTCCAAGCCCAACGGCGA GGAGTTCCTCAACGAGGTGGTCAGCATTGGCCGGACGAGCCATGTCAACATCGTCTCCCT GCTCGGCTTCTGCCTCGAGGGCTCCAAGCGAGCCCTCGTCTACGAGTACATGCCCAATGG CTCGCTGGACAAGTACATCTACTCGACGTCGGCGGCGGCGGCGGCGGAGGCGGAGGAGGC GGAGGCGACGGCGAGCCCTGACAGGGATGTTCTGGGGTGGAAGGTGCTGCAGGAGATCGC CGTCGGCGTGGCGCGGGGGCTGGAGTACCTGCACGACGGGTGCAACACGCGGATCATCCA CTTCGACATCAAGCCGCACAACGTGCTCCTCGACGAGGGATTCCGGCCCAAGATCGCCGA CTTCGGGATGGCGAAGCTGTGCAACCCAAAGGAGAGCATCCTGTCGATGGCGGACACGAG GGGGACGATAGGGTTCATCGCGCCGGAGGTGTTCTCCCGCGGGTTCGGCGACATCTCGAC CAAGTCCGACGTGTACAGCTACGGGATGCTGCTGCTGGAGATGGTCGGCGGCGGGAGCAA CGTCAAGGCCTACGCCGAGAAGGGCGCCAGCGGCACGTTCTTCCCGCTCTGGGTCTACGA CCACCTGCTCGAGGACGGCGGCGTGCTGCAGAGCGTCGCCGCCGCCGCCGCCGCCACGGC CGGCGGCGGCGCCGGATCACCGGGAGGCGAGGAGATCGCGAGGAAGATGGCGCTGATCGG GCTGTGGTGCATACAGACCGTGCCGGCGAACAGGCCGTCGATGGGCAAGGTGCTGGAGAT GCTGGAGAGAAGCGTCCACGAGCTCGCCATGCCGCCGCGGCCGTACCACTCGAACTCGTC GTCCCCGTCGCGGCCGTCGAGCTACCCCTCCTCTGCCTCGGATTTCACGCAGCGATCAAG GTTATCAACACCGGGAAGCACAGCGTGAAAAGTGGCGATGGAATGACTATACTTGAAGCA GACAACTGGCTAGTAGACTGTAAATTAAAGAAAACCAGAGTGGGAGCTTTGGTTTTGTAT GTAGAGCAGATTAGCAAGAACAACAAAATTAGACGTTATTACTGTTTGAATCATTAATTC GTTCTCTTATGGTTTTCTGTGGAAATCATGTACTACTCCTATTCAGTTTTAGTTTAACTT GTGCTTGACG