Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0136400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1957847:1967451:-1 gene:Os01g0136400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 1 description:Protein kinase, core domain containing protein. (Os01t0136400-01)
Sequence	ATGCACCCGACCTTGTTGTGCTTGCCACTCTTGGCCTCCTTGCTCCTCCTGTGCCACCGC GCGCGCGCCGAGTGCGAGCCGGCGACATGCGGCAACCTCACCGTCAGGTACCCATTCTGG CTAGGCGGCCCCAACTTCAACCAGTCCAACCAGTCGTCGCCGTCGTCAGCTCTGGCCTCC TGTGGCCATCCGGCTTTCGAGGTGTGGTGTAACGGCGGCGTGGCGTCGTTGAGGGGCTCG CAAATCCTCGTCCTCAGCATCGACTACAACAGCAGCTCATTCGTCGCGGCACACAAAAGG GTCGCCGACGGCGGCGACGGCGTGTGCCGCACCGACTTCAACATATCGTCCAGCCTAGCC CTCAGCCCGTTCACGATCAGCAGCAGCAACCGGGCCATCTGCTTCCTCTACAGCTGCAAC GGCACGGAGCCACCGGAGATCGACGGCCTTGTGAACGCCACCATCTCCAGCTGCAGTAAG CCTATCTACGCGTACCTCGGCGGGATCTACGACCGTGATAATCCACCGGCGATCAAAGCC GGGAACTGCACGTACTCGTACCTGCCGGTGCTGTGGCCGGACTCGCCGGCGAACTTGACG GCGGGGACAAACTACAGCCCGCAGTTCAAGAAGGGGTTCGTGTTGGAGTGGCAGAAGAAC GGGTTCGGCGACTGCGACGCCTGTAACGGGAGCGGCGGTCAGTGCCGGTACATCAACGAT TCCGCGGCGGCGTTCGCGTGCCTCTGCTCCGACGGCAAGCTGCGCCGCTCGACATGCCCC GGTTCAAGAAGCAAGAGTCACATAATAGGAATAGCATGTGGATCAAGCGGCGGAATATTA TTGATTGTATCTATATTCATTTTTGCTTGGCACAAACGCAAGAAGAGGAAACAAACCCGA GATTTGAAAGATCTCATGCATAGTTCATCTTCAATGCAATCATACAGCAAAGACCTTGAG TTGGGTGGTTCTCCCCATATATTCACTTACGAGGAACTTGAAGAGGCTACTGCTGGATTT AGTGCCTCGAGGGAACTTGGTGATGGTGGTTTTGGAACTGTTTACAAAGGAAAGCTCCGG GATGGGAGAGTAGTTGCAGTGAAGCGCCTTTACAAGAACAACTACAGACGAGTAGAGCAA TTCCTAAATGAGGTAGACATTTTGTCCCGCCTACTGCACCAGAACCTTGTTATCCTATAT GGCTGCACGTCTCGTTCTAGCCGTGACCTTCTCTTGGTCTATGAGTACATCCCAAATGGG ACAGTTGCAGACCATCTACATGGACCCCGTGCAGGAGAACGAGGCCTCACATGGCCTGTA AGAATGACAATTGCGATAGAAACGGCTGAGGCACTGGCATACCTTCATGCAGTTGAAATC ATACACCGTGATGTCAAGACCAACAACATATTGCTGGACAACAACTTCCATGTCAAAGTT GCGGACTTTGGACTATCGCGCCTGTTCCCGCTTGAAGTCACCCATGTATCAACTGTTCCA CAGGGCACACCAGGGTATGTTGACCCAGTGTACCACCAGTGCTACAAGCTAACCGATAAG AGTGATGTGTATAGCTTTGGTGTTGTGTTGATAGAGCTAATTTCCTCAAAACCAGCTGTG GACATGTCCAGGAGCCACAGTGACATTAACTTGGCTAACATGGCTCTCAACAGAATTCAG AACCATGAAGTTGATCAGTTGGTTGATCCAGAGATCGGCTATGAGACTGACAGTGAAACA AAGAGGATGGTAGATCTGGTGGCCGAGCTGGCCTTTCAGTGCTTGCAGATGGACAGAGAG AGCAGGCCACCAATTAAGGAGGTAGTGGAGGTCCTGAATTGTATCAAGAACGGGGAATGT CCAGCGGAAAAGATGAACAAGAATGCGTCTCCAAAGGAAGATTCGCATCTGCTGAAGGAC AGCCTACAGTATTCGCCTGACTCAGTAATCCATAGATTTCATAGCCAATCTACTAACCAC TCGGTAGCATCAAACTCTAGCGGATGA

Peptide Sequence

PEP ID	Os01t0136400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1957847:1967451:-1 gene:Os01g0136400 transcript:Os01t0136400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 1 description:Protein kinase, core domain containing protein. (Os01t0136400-01)
Sequence	MHPTLLCLPLLASLLLLCHRARAECEPATCGNLTVRYPFWLGGPNFNQSNQSSPSSALAS CGHPAFEVWCNGGVASLRGSQILVLSIDYNSSSFVAAHKRVADGGDGVCRTDFNISSSLA LSPFTISSSNRAICFLYSCNGTEPPEIDGLVNATISSCSKPIYAYLGGIYDRDNPPAIKA GNCTYSYLPVLWPDSPANLTAGTNYSPQFKKGFVLEWQKNGFGDCDACNGSGGQCRYIND SAAAFACLCSDGKLRRSTCPGSRSKSHIIGIACGSSGGILLIVSIFIFAWHKRKKRKQTR DLKDLMHSSSSMQSYSKDLELGGSPHIFTYEELEEATAGFSASRELGDGGFGTVYKGKLR DGRVVAVKRLYKNNYRRVEQFLNEVDILSRLLHQNLVILYGCTSRSSRDLLLVYEYIPNG TVADHLHGPRAGERGLTWPVRMTIAIETAEALAYLHAVEIIHRDVKTNNILLDNNFHVKV ADFGLSRLFPLEVTHVSTVPQGTPGYVDPVYHQCYKLTDKSDVYSFGVVLIELISSKPAV DMSRSHSDINLANMALNRIQNHEVDQLVDPEIGYETDSETKRMVDLVAELAFQCLQMDRE SRPPIKEVVEVLNCIKNGECPAEKMNKNASPKEDSHLLKDSLQYSPDSVIHRFHSQSTNH SVASNSSG

Transcript Sequence

Transcript ID	Os01t0136400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1957847:1967451:-1 gene:Os01g0136400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WALL-ASSOCIATED KINASE GENE 1 description:Protein kinase, core domain containing protein. (Os01t0136400-01)
Sequence	AGTCAAGAAAAACAAGGCAATGGCAATAGCATTTCTCGAGCATTAGACCTTCCCCTCCCT TTCCAGCATTCTGCTGCTCTCCAATCCGGCCTCCATTGTGTAGCAGCTAGCTCCACGAGC GGCAAGATGCACCCGACCTTGTTGTGCTTGCCACTCTTGGCCTCCTTGCTCCTCCTGTGC CACCGCGCGCGCGCCGAGTGCGAGCCGGCGACATGCGGCAACCTCACCGTCAGGTACCCA TTCTGGCTAGGCGGCCCCAACTTCAACCAGTCCAACCAGTCGTCGCCGTCGTCAGCTCTG GCCTCCTGTGGCCATCCGGCTTTCGAGGTGTGGTGTAACGGCGGCGTGGCGTCGTTGAGG GGCTCGCAAATCCTCGTCCTCAGCATCGACTACAACAGCAGCTCATTCGTCGCGGCACAC AAAAGGGTCGCCGACGGCGGCGACGGCGTGTGCCGCACCGACTTCAACATATCGTCCAGC CTAGCCCTCAGCCCGTTCACGATCAGCAGCAGCAACCGGGCCATCTGCTTCCTCTACAGC TGCAACGGCACGGAGCCACCGGAGATCGACGGCCTTGTGAACGCCACCATCTCCAGCTGC AGTAAGCCTATCTACGCGTACCTCGGCGGGATCTACGACCGTGATAATCCACCGGCGATC AAAGCCGGGAACTGCACGTACTCGTACCTGCCGGTGCTGTGGCCGGACTCGCCGGCGAAC TTGACGGCGGGGACAAACTACAGCCCGCAGTTCAAGAAGGGGTTCGTGTTGGAGTGGCAG AAGAACGGGTTCGGCGACTGCGACGCCTGTAACGGGAGCGGCGGTCAGTGCCGGTACATC AACGATTCCGCGGCGGCGTTCGCGTGCCTCTGCTCCGACGGCAAGCTGCGCCGCTCGACA TGCCCCGGTTCAAGAAGCAAGAGTCACATAATAGGAATAGCATGTGGATCAAGCGGCGGA ATATTATTGATTGTATCTATATTCATTTTTGCTTGGCACAAACGCAAGAAGAGGAAACAA ACCCGAGATTTGAAAGATCTCATGCATAGTTCATCTTCAATGCAATCATACAGCAAAGAC CTTGAGTTGGGTGGTTCTCCCCATATATTCACTTACGAGGAACTTGAAGAGGCTACTGCT GGATTTAGTGCCTCGAGGGAACTTGGTGATGGTGGTTTTGGAACTGTTTACAAAGGAAAG CTCCGGGATGGGAGAGTAGTTGCAGTGAAGCGCCTTTACAAGAACAACTACAGACGAGTA GAGCAATTCCTAAATGAGGTAGACATTTTGTCCCGCCTACTGCACCAGAACCTTGTTATC CTATATGGCTGCACGTCTCGTTCTAGCCGTGACCTTCTCTTGGTCTATGAGTACATCCCA AATGGGACAGTTGCAGACCATCTACATGGACCCCGTGCAGGAGAACGAGGCCTCACATGG CCTGTAAGAATGACAATTGCGATAGAAACGGCTGAGGCACTGGCATACCTTCATGCAGTT GAAATCATACACCGTGATGTCAAGACCAACAACATATTGCTGGACAACAACTTCCATGTC AAAGTTGCGGACTTTGGACTATCGCGCCTGTTCCCGCTTGAAGTCACCCATGTATCAACT GTTCCACAGGGCACACCAGGGTATGTTGACCCAGTGTACCACCAGTGCTACAAGCTAACC GATAAGAGTGATGTGTATAGCTTTGGTGTTGTGTTGATAGAGCTAATTTCCTCAAAACCA GCTGTGGACATGTCCAGGAGCCACAGTGACATTAACTTGGCTAACATGGCTCTCAACAGA ATTCAGAACCATGAAGTTGATCAGTTGGTTGATCCAGAGATCGGCTATGAGACTGACAGT GAAACAAAGAGGATGGTAGATCTGGTGGCCGAGCTGGCCTTTCAGTGCTTGCAGATGGAC AGAGAGAGCAGGCCACCAATTAAGGAGGTAGTGGAGGTCCTGAATTGTATCAAGAACGGG GAATGTCCAGCGGAAAAGATGAACAAGAATGCGTCTCCAAAGGAAGATTCGCATCTGCTG AAGGACAGCCTACAGTATTCGCCTGACTCAGTAATCCATAGATTTCATAGCCAATCTACT AACCACTCGGTAGCATCAAACTCTAGCGGATGATGAGAAACTTTGTATTGATTCTGATGA AATAAGGATAACTAAGTTGTCCCCTCTTGGTTGATGGACTAATTAATACTACAAGTGTTT GACTATGAGCTTGGCAGAAATTCAGACAATTGGTGAATGCGGTAGGAGAAATACAGGGTT CAAACAATCTCGTGTAATCTAGTGTTCAGTGTGTTCATGATTTCAGGTTAGCGAGTGGTA TCAGGGAGAACACATCCCATTGTTACCCTAACTAGAGGTTGCAATTTTGC