Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0135900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:1941012:1941845:1 gene:Os01g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:17.9 KDA HEAT SHOCK PROTEIN 2 description:Similar to Cytosolic class I small heat shock protein 3C (Fragment). (Os01t0135900-01);LMW heat shock protein. (Os01t0135900-02)
Sequence	ATGTCTCTGGTGAAGCTGTTTGATACGTTGGCGTTCGACGCCTGGAACCCGTTCAGCATC TTTGGGACGACGGTGGCGGCGGACGCGTGGCTGGCGAGCGACACGTCGGCGTTCGCCAAC ACGTACATCGAGAGCCGGGAGACGGCGGAGGCGTACGTGTTCCGGGCGGACCTGCCGGCG GGGGTGAAGAAGGAGGAGGTGCGGGTGGAGGTGGACGAGGGGAACGTGCTGGTGATCACC GGCGAGCGCAGCGTCCGGCGGGAGGAGAAGGGCCAGCGGTCGCACCACATCGAGCGCAGC TGCGCCACCTTCTTCGGCAGGTTCCACCTCCCCGACGACGCCGTCGTCGACCTCGTCAGG GCGTCCATGGACGGCGGCATGCTCACCGTCACCGTGCCCAAGGTGGTCACTGACAAGCAG CCCGCCATCGCCGCCGCCGCACCCGTCCCCGCCGTCGTCGCACCCGCTGTCGAGGCGAAG GCAATCGAAGCCAGCCCGTAG

Peptide Sequence

PEP ID	Os01t0135900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:1941012:1941845:1 gene:Os01g0135900 transcript:Os01t0135900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:17.9 KDA HEAT SHOCK PROTEIN 2 description:Similar to Cytosolic class I small heat shock protein 3C (Fragment). (Os01t0135900-01);LMW heat shock protein. (Os01t0135900-02)
Sequence	MSLVKLFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPA GVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVR ASMDGGMLTVTVPKVVTDKQPAIAAAAPVPAVVAPAVEAKAIEASP

Transcript Sequence

Transcript ID	Os01t0135900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1941012:1941845:1 gene:Os01g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:17.9 KDA HEAT SHOCK PROTEIN 2 description:Similar to Cytosolic class I small heat shock protein 3C (Fragment). (Os01t0135900-01);LMW heat shock protein. (Os01t0135900-02)
Sequence	ACCAGCAGCAGCTCGCCATCCAAGCATCAAAGCTTCTAAACTGAAGCTTAATCTATATAT AAGGAGAGTTCATTTTGATTTTGGTGAGGAAGAAGTAGTAGAAGTGAATTAGTGATATCG ATCAGAGTGTGAAGAAGATGTCTCTGGTGAAGCTGTTTGATACGTTGGCGTTCGACGCCT GGAACCCGTTCAGCATCTTTGGGACGACGGTGGCGGCGGACGCGTGGCTGGCGAGCGACA CGTCGGCGTTCGCCAACACGTACATCGAGAGCCGGGAGACGGCGGAGGCGTACGTGTTCC GGGCGGACCTGCCGGCGGGGGTGAAGAAGGAGGAGGTGCGGGTGGAGGTGGACGAGGGGA ACGTGCTGGTGATCACCGGCGAGCGCAGCGTCCGGCGGGAGGAGAAGGGCCAGCGGTCGC ACCACATCGAGCGCAGCTGCGCCACCTTCTTCGGCAGGTTCCACCTCCCCGACGACGCCG TCGTCGACCTCGTCAGGGCGTCCATGGACGGCGGCATGCTCACCGTCACCGTGCCCAAGG TGGTCACTGACAAGCAGCCCGCCATCGCCGCCGCCGCACCCGTCCCCGCCGTCGTCGCAC CCGCTGTCGAGGCGAAGGCAATCGAAGCCAGCCCGTAGTGATGCGATGAACACACACACA CACACACAGACAGTCAGTCAATCCAACGATCCGTATGTATACGTTGTCGTCGATGATAAG TTCAAAGTGCTTGCGAGTAAGGTGCTTGCTGTACTTTTGGTTTAATTACCTTTGGTGTGA AATGCTTTCTCGATGTAAGACAAGAAAGCTAGTAGCAAAATCATACTATTTGCT