Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0134900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:1912561:1915094:-1 gene:Os01g0134900 gene_biotype:protein_coding transcript_biotype:protein_coding description:(1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment). (Os01t0134900-01)
Sequence	ATGGCCTGCACCAAGGGGGTGGTTTTCGACGTGAACCTGCTCGAGAACAGCACGCTGGAG GACGGGCTCGCCGGCTGGGCGGCGGTCGGCGAGTGCACGGCGCTGTCCGTGCACAATGAG GAGCCGGAGAAGGTGCCGACCGAGACCATCAACACGGTGGCCGACGACTACAAGCCCAGC GGCCGGTACATCCTCGCGGCGGGCCGCGCCGGCGAGGAGGACGGGCTGCGCCGGGCGGTG GCCGGCGCGCTCAAGCCCCGCGTCACGTACCGCGTGGCCGGGTGGATCAGCCTCGGCGAC GGCGCCGAGGGGAGCCACCCGGTGCGCGTCAACCTCCGCCTCGACGACGACGACGAGTGC GTCGTCGAGGGCGGCGCGGTGTGCGCCCAGGCCGGCAGGTGGACGGAGATCAAGGGCGCG TTCCGGCTCAAGGCGAGCCCGTGCGGCGCGACGGTGTTCGTCCAGGGCGCGCCCGACGGC GTCGACGTGAAGGTGATGGATCTCCAAATCTTCGCCACGGATCGCAGGGCACGGTTCAGG AAACTCAGGAAGAAGACTGACAAGGTGCGGAAGCGGGACGTCGTTCTCAAGTTCGGTGGG GCGGGGAGCATATCGGGGGCGTCCGTACGCGTGATGCAGATGGACAGCAGCTTCCCGTTC GGGGCGTGCATCAATGGCGGGGTGATCCAGAACCCGGCGTTCGTGGACTTCTTCACGAAG CACTTCGACTGGGCGGTGTTCGAGAACGAGCTCAAGTGGTACTGGACGGAGGCGCAGCAG GGGCAGCTCAACTACGCCGACGCCGACGCGCTGCTCGACTTCTGCGACCGCTACGGCAAG CCGGTGCGCGGGCACTGCATCTTCTGGGCCGTCGACAACGTGGTGCAGCAGTGGATCAAG GGGCTCGACCACGACCAGCTGACGGCCGCCGTGCAGGGCCGCCTCACCGGCCTCCTCACC CGCTACGCCGGCAGGTTCCCGCACTACGACGTCAACAACGAGATGCTCCACGGCAGCTTC TACCAGGACCGCCTCGGCGACGACATCAACGCCTTCATGTTCCGGGAGACGGCGCGCCTC GACCCGGGCGCCACGCTCTTCGTCAACGACTACAACGTCGAGGGCGGCAACGACCCCAAC GCCACGCCGGAGAAGTACATCGAGCAGATCACCGCGCTGCAGCAGAAGGGCGCGGCCGTC GGCGGCATCGGCCTCCAGGGCCACGTCACCAACCCCGTCGGGGAGGTCATCTGCGACGCG CTCGACAAGCTCGCCACCACCGACCTCCCCGTCTGGCTCACCGAGCTCGACGTCTGCGAG TCTGACGTCGACCTCCGCGCCGACGACCTCGAGGTGGTGCTCCGGGAGGCGTACGCGCAC CCGGCCGTCGAGGGCGTCATGTTCTGGGGTTTCATGCAGGGCCACATGTGGCGCCAGGAC GCCTGCCTCGTCAACTCCGACGGCACCGTCAACGACGCCGGCGAGAGGTTCATAGATCTC CGGCGGGAGTGGACGTCGCACGCGCGCGGCCACATCGACGGCGACGGCCACTTCAAGTTC AGGGGCTTCCACGGCACGTACGTCGTGCAGCTCGCGACGGCGACGGGGAAGATGCACAAG ACGTTCACCGTGGAGAAGGGGGACACCCCTCTTGTGCTGGATATGGACGTCTGA

Peptide Sequence

PEP ID	Os01t0134900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:1912561:1915094:-1 gene:Os01g0134900 transcript:Os01t0134900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:(1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment). (Os01t0134900-01)
Sequence	MACTKGVVFDVNLLENSTLEDGLAGWAAVGECTALSVHNEEPEKVPTETINTVADDYKPS GRYILAAGRAGEEDGLRRAVAGALKPRVTYRVAGWISLGDGAEGSHPVRVNLRLDDDDEC VVEGGAVCAQAGRWTEIKGAFRLKASPCGATVFVQGAPDGVDVKVMDLQIFATDRRARFR KLRKKTDKVRKRDVVLKFGGAGSISGASVRVMQMDSSFPFGACINGGVIQNPAFVDFFTK HFDWAVFENELKWYWTEAQQGQLNYADADALLDFCDRYGKPVRGHCIFWAVDNVVQQWIK GLDHDQLTAAVQGRLTGLLTRYAGRFPHYDVNNEMLHGSFYQDRLGDDINAFMFRETARL DPGATLFVNDYNVEGGNDPNATPEKYIEQITALQQKGAAVGGIGLQGHVTNPVGEVICDA LDKLATTDLPVWLTELDVCESDVDLRADDLEVVLREAYAHPAVEGVMFWGFMQGHMWRQD ACLVNSDGTVNDAGERFIDLRREWTSHARGHIDGDGHFKFRGFHGTYVVQLATATGKMHK TFTVEKGDTPLVLDMDV

Transcript Sequence

Transcript ID	Os01t0134900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:1912561:1915094:-1 gene:Os01g0134900 gene_biotype:protein_coding transcript_biotype:protein_coding description:(1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment). (Os01t0134900-01)
Sequence	GCAAATCACCAATCCACGGCGAACAAGTCGTTCCAGACTCCGGCGATCACCTGCTCCTGC TGCCACGATCATGGCCTGCACCAAGGGGGTGGTTTTCGACGTGAACCTGCTCGAGAACAG CACGCTGGAGGACGGGCTCGCCGGCTGGGCGGCGGTCGGCGAGTGCACGGCGCTGTCCGT GCACAATGAGGAGCCGGAGAAGGTGCCGACCGAGACCATCAACACGGTGGCCGACGACTA CAAGCCCAGCGGCCGGTACATCCTCGCGGCGGGCCGCGCCGGCGAGGAGGACGGGCTGCG CCGGGCGGTGGCCGGCGCGCTCAAGCCCCGCGTCACGTACCGCGTGGCCGGGTGGATCAG CCTCGGCGACGGCGCCGAGGGGAGCCACCCGGTGCGCGTCAACCTCCGCCTCGACGACGA CGACGAGTGCGTCGTCGAGGGCGGCGCGGTGTGCGCCCAGGCCGGCAGGTGGACGGAGAT CAAGGGCGCGTTCCGGCTCAAGGCGAGCCCGTGCGGCGCGACGGTGTTCGTCCAGGGCGC GCCCGACGGCGTCGACGTGAAGGTGATGGATCTCCAAATCTTCGCCACGGATCGCAGGGC ACGGTTCAGGAAACTCAGGAAGAAGACTGACAAGGTGCGGAAGCGGGACGTCGTTCTCAA GTTCGGTGGGGCGGGGAGCATATCGGGGGCGTCCGTACGCGTGATGCAGATGGACAGCAG CTTCCCGTTCGGGGCGTGCATCAATGGCGGGGTGATCCAGAACCCGGCGTTCGTGGACTT CTTCACGAAGCACTTCGACTGGGCGGTGTTCGAGAACGAGCTCAAGTGGTACTGGACGGA GGCGCAGCAGGGGCAGCTCAACTACGCCGACGCCGACGCGCTGCTCGACTTCTGCGACCG CTACGGCAAGCCGGTGCGCGGGCACTGCATCTTCTGGGCCGTCGACAACGTGGTGCAGCA GTGGATCAAGGGGCTCGACCACGACCAGCTGACGGCCGCCGTGCAGGGCCGCCTCACCGG CCTCCTCACCCGCTACGCCGGCAGGTTCCCGCACTACGACGTCAACAACGAGATGCTCCA CGGCAGCTTCTACCAGGACCGCCTCGGCGACGACATCAACGCCTTCATGTTCCGGGAGAC GGCGCGCCTCGACCCGGGCGCCACGCTCTTCGTCAACGACTACAACGTCGAGGGCGGCAA CGACCCCAACGCCACGCCGGAGAAGTACATCGAGCAGATCACCGCGCTGCAGCAGAAGGG CGCGGCCGTCGGCGGCATCGGCCTCCAGGGCCACGTCACCAACCCCGTCGGGGAGGTCAT CTGCGACGCGCTCGACAAGCTCGCCACCACCGACCTCCCCGTCTGGCTCACCGAGCTCGA CGTCTGCGAGTCTGACGTCGACCTCCGCGCCGACGACCTCGAGGTGGTGCTCCGGGAGGC GTACGCGCACCCGGCCGTCGAGGGCGTCATGTTCTGGGGTTTCATGCAGGGCCACATGTG GCGCCAGGACGCCTGCCTCGTCAACTCCGACGGCACCGTCAACGACGCCGGCGAGAGGTT CATAGATCTCCGGCGGGAGTGGACGTCGCACGCGCGCGGCCACATCGACGGCGACGGCCA CTTCAAGTTCAGGGGCTTCCACGGCACGTACGTCGTGCAGCTCGCGACGGCGACGGGGAA GATGCACAAGACGTTCACCGTGGAGAAGGGGGACACCCCTCTTGTGCTGGATATGGACGT CTGACGATTACTTCCATTATTTTATACTCCATACAGTTTATACTGATGATTATTTGATCG AACAGAGGGCAAAGCAACTTTTACCTCGATCACATACAACAACTACAATTTTACATTTTC AACTATTGTATGAGAAAAGTAAGGTATTGTACTGGTTAAAGTTAATTAAGAAATAAAGTA AAAACGGGCTATTCCTCGTTTTATAGTACATGATTATCTTTTTAAAAATATATATATATA TAATATAACGGGATTATCTGTGC