Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0134200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:1878013:1879358:1 gene:Os01g0134200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0134200-01);Hypothetical conserved gene. (Os01t0134200-02)
Sequence

AAATGTACTGAGAGTGACAACAAGCCACTGATGGAACACCCCAAGAGAAACCCATGGCCA
CCTGCTTGGTTAGGATGGAAGAAGTGGTATGTGTCCTGGACTGTAGTCAATTATTCTGAT
ATGAGATTTTATTTCATTCCACCGTGGCCACCGCCACTTAAAGTAGGTTGGCTTGCATTG
GTATTTTCTAAATTTGGAGCAGCTCATACTGACATGATGGATATAATGTTGCATTGGACT
GATATGAAACCATGGCCTCCACCAAATCAAAATTTGAGAAGTATCATGGTGCATCTATTT
GCTTGGAAGCATTGGAAAGTTAGTGTAGAAGTGAGTCTCTTTGCTTGGAACACTAAACAA
TACATGAATAGTGTGCTACTTATTACAGTTGGCACCAAATGGTTGATTCACTCTGCAGTC
AAGGACTGTTTTCTCCAAGGCAAGCCATTCAAACTTGTGGACCCATTGGAACTCATGCAA
GTAATTTTTGTGCTATTAGTGCGGGATCCAGATGTTGAGATGTTTCAGATTGGCAGCTAC
TCTCTACAACCAGAAAATTATCAATTAACTAACTACTTGGTGGCAAGACTATTGAAGCAA
GGTAATCTGAAAAAGGTACTCGATGGTGTGGATCATAGCAAAAACATTAAGAAGAGTGAT
GTTGATGTTGGCGAGGACAATCCTGGTAATATTAGTACTGCAGCAAAAATGTTCATTGAT
GGTCTTGGTATCAAGGAAGATTCAGACATGCTATGTCCATCAGCCCAGTACATTGATAAT
TGGTCTACTAAGCTGCTGGATGAGATAAGAAACGGGTGCAATATATATCTGTTAGTAGCA
CTAATAGATGATGAGCTTAATCCATGGTGTTTCCTCATAGATAAGATATGGTATGATATT
TTGGTGCTTCTATTTTTTACTGGGGCTACATGGAAGGTTGAAAGCTATGCACTTCCAATT
AAAGATGTTATCCATATGGTTGTTTATTTTGTGCAACCTTTGCAAGGTATTCTGCTCCAA
ACAAGGCAAGGAAAAATAGAGAATCCTGTCATTTTGGACATAACTTCAGCAACTCAAACT
GTCAAGTTTTTGCTCTGTTACAAGTCAACTATTAAGATCTACCCAAGTTGTTCTTCCATG
GTACAAATTTCTGCCAGTAAATTCAGAGCTTGTGGGAAGGAGAACATATGCTACATGCTT
CTATTGCTTGTATTGAATATTGGTGACTGCACTTTTCTGAGGTCCACTTCCTATATGCTA
CATGCTTCTATTGCTTGTGCTGAATATTGGTGCCTGCACTTCTCTGAGGTTGTCCAACAT
GCAATTTGTATTGGATGGATTATC

Peptide Sequence

PEP ID

Os01t0134200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:1878013:1879358:1 gene:Os01g0134200 transcript:Os01t0134200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0134200-01);Hypothetical conserved gene. (Os01t0134200-02)
Sequence

KCTESDNKPLMEHPKRNPWPPAWLGWKKWYVSWTVVNYSDMRFYFIPPWPPPLKVGWLAL
VFSKFGAAHTDMMDIMLHWTDMKPWPPPNQNLRSIMVHLFAWKHWKVSVEVSLFAWNTKQ
YMNSVLLITVGTKWLIHSAVKDCFLQGKPFKLVDPLELMQVIFVLLVRDPDVEMFQIGSY
SLQPENYQLTNYLVARLLKQGNLKKVLDGVDHSKNIKKSDVDVGEDNPGNISTAAKMFID
GLGIKEDSDMLCPSAQYIDNWSTKLLDEIRNGCNIYLLVALIDDELNPWCFLIDKIWYDI
LVLLFFTGATWKVESYALPIKDVIHMVVYFVQPLQGILLQTRQGKIENPVILDITSATQT
VKFLLCYKSTIKIYPSCSSMVQISASKFRACGKENICYMLLLLVLNIGDCTFLRSTSYML
HASIACAEYWCLHFSEVVQHAICIGWII

Transcript Sequence

Transcript ID

Os01t0134200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1878013:1879358:1 gene:Os01g0134200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0134200-01);Hypothetical conserved gene. (Os01t0134200-02)
Sequence

TGAAATGTACTGAGAGTGACAACAAGCCACTGATGGAACACCCCAAGAGAAACCCATGGC
CACCTGCTTGGTTAGGATGGAAGAAGTGGTATGTGTCCTGGACTGTAGTCAATTATTCTG
ATATGAGATTTTATTTCATTCCACCGTGGCCACCGCCACTTAAAGTAGGTTGGCTTGCAT
TGGTATTTTCTAAATTTGGAGCAGCTCATACTGACATGATGGATATAATGTTGCATTGGA
CTGATATGAAACCATGGCCTCCACCAAATCAAAATTTGAGAAGTATCATGGTGCATCTAT
TTGCTTGGAAGCATTGGAAAGTTAGTGTAGAAGTGAGTCTCTTTGCTTGGAACACTAAAC
AATACATGAATAGTGTGCTACTTATTACAGTTGGCACCAAATGGTTGATTCACTCTGCAG
TCAAGGACTGTTTTCTCCAAGGCAAGCCATTCAAACTTGTGGACCCATTGGAACTCATGC
AAGTAATTTTTGTGCTATTAGTGCGGGATCCAGATGTTGAGATGTTTCAGATTGGCAGCT
ACTCTCTACAACCAGAAAATTATCAATTAACTAACTACTTGGTGGCAAGACTATTGAAGC
AAGGTAATCTGAAAAAGGTACTCGATGGTGTGGATCATAGCAAAAACATTAAGAAGAGTG
ATGTTGATGTTGGCGAGGACAATCCTGGTAATATTAGTACTGCAGCAAAAATGTTCATTG
ATGGTCTTGGTATCAAGGAAGATTCAGACATGCTATGTCCATCAGCCCAGTACATTGATA
ATTGGTCTACTAAGCTGCTGGATGAGATAAGAAACGGGTGCAATATATATCTGTTAGTAG
CACTAATAGATGATGAGCTTAATCCATGGTGTTTCCTCATAGATAAGATATGGTATGATA
TTTTGGTGCTTCTATTTTTTACTGGGGCTACATGGAAGGTTGAAAGCTATGCACTTCCAA
TTAAAGATGTTATCCATATGGTTGTTTATTTTGTGCAACCTTTGCAAGGTATTCTGCTCC
AAACAAGGCAAGGAAAAATAGAGAATCCTGTCATTTTGGACATAACTTCAGCAACTCAAA
CTGTCAAGTTTTTGCTCTGTTACAAGTCAACTATTAAGATCTACCCAAGTTGTTCTTCCA
TGGTACAAATTTCTGCCAGTAAATTCAGAGCTTGTGGGAAGGAGAACATATGCTACATGC
TTCTATTGCTTGTATTGAATATTGGTGACTGCACTTTTCTGAGGTCCACTTCCTATATGC
TACATGCTTCTATTGCTTGTGCTGAATATTGGTGCCTGCACTTCTCTGAGGTTGTCCAAC
ATGCAATTTGTATTGGATGGATTATC