Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0133200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:1838282:1839194:-1 gene:Os01g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0133200-01)
Sequence

ATGCCGAGGTCGTCGTCCTCCTCCAAGCCGATTCTCGGGAGGGCCATGGCGATCCTGGCG
CTCCCGCTGACCCCGATATCCAAGGCCAAGGGCCCCATCGCCAGGAACCTGCTGCTCTTC
AAGAAGCGCGGCGCCGCCGGGAAGGCTCGCCGGATGCTGTCGTCGTACGGGTACAAGCCG
CACCGCCACTACAACTACGACTACGTCGGGGAGTACCAGTTCTCCCCCTCCAGCTCCCCG
CTCATCGCGTACCCTCCGGGCGTCTCGTCGTGGCGGAGGGCCACCAAGAAGCGGAGGAGC
AAGGCCAGGATGATCCTCGCCTCCCTCCTCTGCGGCGGCGACGGCGACCTCGACGTCGCC
GTGCTCGACGGCTTGCCTCGAGCCGACGAGCCGCGCGCCGCCGTGGAGTGGGAAGAGTGC
CGCCGCGACGGCGGCGGCGCGTACGGCGAGGGTGATCAGTACGAGGAGGAGGAAGAGGAG
GAGGACGACGAGGGGGTCGACGGCCGGGCGGAGCGGTTCATCGAGAGGTTCTACGAGGAG
ATGAGGCTGCAGAGGCAGCGCTCTCTGGTCCAGCGTCTCCTCTGA

Peptide Sequence

PEP ID

Os01t0133200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:1838282:1839194:-1 gene:Os01g0133200 transcript:Os01t0133200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0133200-01)
Sequence

MPRSSSSSKPILGRAMAILALPLTPISKAKGPIARNLLLFKKRGAAGKARRMLSSYGYKP
HRHYNYDYVGEYQFSPSSSPLIAYPPGVSSWRRATKKRRSKARMILASLLCGGDGDLDVA
VLDGLPRADEPRAAVEWEECRRDGGGAYGEGDQYEEEEEEEDDEGVDGRAERFIERFYEE
MRLQRQRSLVQRLL

Transcript Sequence

Transcript ID

Os01t0133200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:1838282:1839194:-1 gene:Os01g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0133200-01)
Sequence

CGACTCGGCCGCTGGCCCGCTGCTGCTGCTGCTGCACACGCCATTTTTGAATGTGAGAAA
GAGAGGGAAACCCAACCAGGAGAGGGCAATGCCGAGGTCGTCGTCCTCCTCCAAGCCGAT
TCTCGGGAGGGCCATGGCGATCCTGGCGCTCCCGCTGACCCCGATATCCAAGGCCAAGGG
CCCCATCGCCAGGAACCTGCTGCTCTTCAAGAAGCGCGGCGCCGCCGGGAAGGCTCGCCG
GATGCTGTCGTCGTACGGGTACAAGCCGCACCGCCACTACAACTACGACTACGTCGGGGA
GTACCAGTTCTCCCCCTCCAGCTCCCCGCTCATCGCGTACCCTCCGGGCGTCTCGTCGTG
GCGGAGGGCCACCAAGAAGCGGAGGAGCAAGGCCAGGATGATCCTCGCCTCCCTCCTCTG
CGGCGGCGACGGCGACCTCGACGTCGCCGTGCTCGACGGCTTGCCTCGAGCCGACGAGCC
GCGCGCCGCCGTGGAGTGGGAAGAGTGCCGCCGCGACGGCGGCGGCGCGTACGGCGAGGG
TGATCAGTACGAGGAGGAGGAAGAGGAGGAGGACGACGAGGGGGTCGACGGCCGGGCGGA
GCGGTTCATCGAGAGGTTCTACGAGGAGATGAGGCTGCAGAGGCAGCGCTCTCTGGTCCA
GCGTCTCCTCTGAATCGAGCCATCCAGCTCTGCTCTGCTCAATGGCCTCTGCTCTGCCTT
CGCTGCGTTGGATCGCTTCACTGCCTCTTCTGCTGCCGTAGCTTCTTGGTAGGATTAAAT
TGTCGCTATCTTAGCTGCAGCTTCTTCATGTTCTTGTTACTTCGTTGCATCGTTTTACCG
TTGCTGCTGTATCTGTTTATCAGTCTGTGGGGAGAACTTTCTTTTCCCTGCTTCAATTCA
GTCTTTACATTTC